CircRNA Information

General Information
circRNA Basic Information
CircID chr12:112508268|112508403
Strand +
CircType exon
Host Gene ENSG00000179295.14;
Algorism CIRI2;
Sequence CTCGAGCTTTCTCCATCATCCCAGCCTCTCTGCCTGATTCCATCTCATGTAAAGTAAACTCGTCTGAGAACCTGCGATCACCTTTTACCAAGCACATGATAAGCCGTAGCAACCTAGGGACTATGATAACTCTGGC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:112508268|112508403 hsa-miR-143-5p 0 0 1
chr12:112508268|112508403 hsa-miR-143-3p 0 0 1
chr12:112508268|112508403 hsa-miR-487a-5p 0 0 1
chr12:112508268|112508403 hsa-miR-487a-3p 0 0 1
chr12:112508268|112508403 hsa-miR-636 0 0 1
chr12:112508268|112508403 hsa-miR-657 0 1 1
chr12:112508268|112508403 hsa-miR-485-5p 1 1 1
chr12:112508268|112508403 hsa-miR-218 0 0 1
chr12:112508268|112508403 hsa-miR-638 1 0 0
chr12:112508268|112508403 hsa-miR-639 1 0 0
chr12:112508268|112508403 hsa-miR-762 1 0 0
chr12:112508268|112508403 hsa-miR-3652 1 0 0
chr12:112508268|112508403 hsa-miR-3937 1 0 0
chr12:112508268|112508403 hsa-miR-4430 1 0 0
chr12:112508268|112508403 hsa-miR-4449 1 0 0
chr12:112508268|112508403 hsa-miR-548ai 0 1 0
chr12:112508268|112508403 hsa-miR-4505 1 0 0
chr12:112508268|112508403 hsa-miR-4514 1 1 0
chr12:112508268|112508403 hsa-miR-4531 0 1 0
chr12:112508268|112508403 hsa-miR-4534 0 1 0
chr12:112508268|112508403 hsa-miR-1587 1 0 0
chr12:112508268|112508403 hsa-miR-4651 1 0 0
chr12:112508268|112508403 hsa-miR-4656 1 0 0
chr12:112508268|112508403 hsa-miR-4673 1 0 0
chr12:112508268|112508403 hsa-miR-4692 0 1 0
chr12:112508268|112508403 hsa-miR-4739 1 0 0
chr12:112508268|112508403 hsa-miR-5194 1 0 0
chr12:112508268|112508403 hsa-miR-5787 1 1 0
chr12:112508268|112508403 hsa-miR-6085 1 0 0
chr12:112508268|112508403 hsa-miR-6086 1 0 0
chr12:112508268|112508403 hsa-miR-6088 1 0 0
chr12:112508268|112508403 hsa-miR-8085 1 0 0
chr12:112508268|112508403 hsa-miR-6765-5p 1 0 0
chr12:112508268|112508403 hsa-miR-25-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6728-5p 1 1 0
chr12:112508268|112508403 hsa-miR-3622a-5p 1 0 0
chr12:112508268|112508403 hsa-miR-5187-5p 1 1 0
chr12:112508268|112508403 hsa-miR-6089 1 0 0
chr12:112508268|112508403 hsa-miR-3192-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6757-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6730-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6798-5p 1 0 0
chr12:112508268|112508403 hsa-miR-2467-3p 1 0 0
chr12:112508268|112508403 hsa-miR-6888-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6821-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6740-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6823-5p 1 0 0
chr12:112508268|112508403 hsa-miR-7854-3p 1 0 0
chr12:112508268|112508403 hsa-miR-937-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6886-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6866-5p 1 0 0
chr12:112508268|112508403 hsa-miR-7112-5p 1 0 0
chr12:112508268|112508403 hsa-miR-423-5p 1 0 0
chr12:112508268|112508403 hsa-miR-2114-5p 0 1 0
chr12:112508268|112508403 hsa-miR-6832-5p 1 0 0
chr12:112508268|112508403 hsa-miR-1207-5p 1 1 0
chr12:112508268|112508403 hsa-miR-4763-3p 1 0 0
chr12:112508268|112508403 hsa-miR-6812-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6870-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6893-5p 1 0 0
chr12:112508268|112508403 hsa-miR-5001-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6743-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6754-5p 1 1 0
chr12:112508268|112508403 hsa-miR-6813-5p 1 0 0
chr12:112508268|112508403 hsa-miR-1249-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6808-5p 1 1 0
chr12:112508268|112508403 hsa-miR-3620-5p 1 0 0
chr12:112508268|112508403 hsa-miR-4701-3p 1 0 0
chr12:112508268|112508403 hsa-miR-6735-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6858-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6883-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6831-5p 1 0 0
chr12:112508268|112508403 hsa-miR-4769-5p 1 0 0
chr12:112508268|112508403 hsa-miR-1910-3p 1 1 0
chr12:112508268|112508403 hsa-miR-6511a-5p 1 1 0
chr12:112508268|112508403 hsa-miR-3198 1 0 0
chr12:112508268|112508403 hsa-miR-6758-5p 0 1 0
chr12:112508268|112508403 hsa-miR-6856-5p 0 1 0
chr12:112508268|112508403 hsa-miR-4646-5p 1 0 0
chr12:112508268|112508403 hsa-miR-6884-5p 1 1 0
chr12:112508268|112508403 hsa-miR-570-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:112508268|112508403
ORF Type ORF1
Protein Length 35
Nucleotide Length 105
Protein Sequence MPDSISCKVNSSENLRSPFTKHMISRSNLGTMITL
Nucleotide Sequence CTGCCTGATTCCATCTCATGTAAAGTAAACTCGTCTGAGAACCTGCGATCACCTTTTACCAAGCACATGATAAGCCGTAGCAACCTAGGGACTATGATAACTCTG
CircID chr12:112508268|112508403
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MLRLIMCLVKGDRRFSDEFTLHEMESGREAGMMEKAR
Nucleotide Sequence TTGCTACGGCTTATCATGTGCTTGGTAAAAGGTGATCGCAGGTTCTCAGACGAGTTTACTTTACATGAGATGGAATCAGGCAGAGAGGCTGGGATGATGGAGAAAGCTCGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab