CircRNA Information

General Information
circRNA Basic Information
CircID chr12:113010818|113010968
Strand -
CircType exon
Host Gene ENSG00000111335.11;
Algorism CIRI2;
Sequence TTTCCCCTTGGTTCTCATAACTCTGTGATCTTGCTCTCGGTGCTTCCAACTCATCCACGTCCTGTCTGTTTCCTCTGTATACAAAACCCTTTCTGCCCCTGCTGACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:113010818|113010968 hsa-miR-214-5p 0 0 1
chr12:113010818|113010968 hsa-miR-214-3p 0 0 1
chr12:113010818|113010968 hsa-miR-146a-5p 0 0 1
chr12:113010818|113010968 hsa-miR-146a-3p 0 0 1
chr12:113010818|113010968 hsa-miR-488-5p 0 0 1
chr12:113010818|113010968 hsa-miR-488-3p 0 0 1
chr12:113010818|113010968 hsa-miR-568 0 0 1
chr12:113010818|113010968 hsa-miR-571 1 0 1
chr12:113010818|113010968 hsa-miR-589-5p 0 0 1
chr12:113010818|113010968 hsa-miR-589-3p 0 0 1
chr12:113010818|113010968 hsa-miR-592 0 0 1
chr12:113010818|113010968 hsa-miR-597-5p 0 0 1
chr12:113010818|113010968 hsa-miR-597-3p 0 0 1
chr12:113010818|113010968 hsa-miR-604 0 0 1
chr12:113010818|113010968 hsa-miR-647 0 0 1
chr12:113010818|113010968 hsa-miR-877-5p 0 0 1
chr12:113010818|113010968 hsa-miR-877-3p 0 0 1
chr12:113010818|113010968 hsa-miR-922 0 0 1
chr12:113010818|113010968 hsa-miR-1255a 1 0 1
chr12:113010818|113010968 hsa-miR-1265 0 0 1
chr12:113010818|113010968 hsa-miR-1324 0 0 1
chr12:113010818|113010968 hsa-miR-671-5p 1 0 1
chr12:113010818|113010968 hsa-miR-486-3p 1 0 1
chr12:113010818|113010968 hsa-miR-296-3p 1 1 1
chr12:113010818|113010968 hsa-miR-654-3p 0 0 1
chr12:113010818|113010968 hsa-miR-576-5p 0 0 1
chr12:113010818|113010968 hsa-miR-146b-5p 0 0 1
chr12:113010818|113010968 hsa-miR-1255b 0 0 1
chr12:113010818|113010968 hsa-miR-219-1-3p 0 0 1
chr12:113010818|113010968 hsa-miR-198 1 0 0
chr12:113010818|113010968 hsa-miR-761 1 0 0
chr12:113010818|113010968 hsa-miR-1182 1 0 0
chr12:113010818|113010968 hsa-miR-1286 1 0 0
chr12:113010818|113010968 hsa-miR-1268a 1 0 0
chr12:113010818|113010968 hsa-miR-2110 1 0 0
chr12:113010818|113010968 hsa-miR-3125 1 1 0
chr12:113010818|113010968 hsa-miR-3132 1 0 0
chr12:113010818|113010968 hsa-miR-3138 1 0 0
chr12:113010818|113010968 hsa-miR-3154 1 0 0
chr12:113010818|113010968 hsa-miR-3174 1 0 0
chr12:113010818|113010968 hsa-miR-3196 1 0 0
chr12:113010818|113010968 hsa-miR-4271 1 0 0
chr12:113010818|113010968 hsa-miR-4291 0 1 0
chr12:113010818|113010968 hsa-miR-3665 1 0 0
chr12:113010818|113010968 hsa-miR-3916 0 1 0
chr12:113010818|113010968 hsa-miR-3936 0 1 0
chr12:113010818|113010968 hsa-miR-1268b 1 0 0
chr12:113010818|113010968 hsa-miR-4428 1 0 0
chr12:113010818|113010968 hsa-miR-4462 1 0 0
chr12:113010818|113010968 hsa-miR-4496 1 0 0
chr12:113010818|113010968 hsa-miR-4498 1 0 0
chr12:113010818|113010968 hsa-miR-2392 1 0 0
chr12:113010818|113010968 hsa-miR-4507 1 0 0
chr12:113010818|113010968 hsa-miR-4514 1 0 0
chr12:113010818|113010968 hsa-miR-1587 1 0 0
chr12:113010818|113010968 hsa-miR-3960 1 0 0
chr12:113010818|113010968 hsa-miR-4657 1 0 0
chr12:113010818|113010968 hsa-miR-4673 1 0 0
chr12:113010818|113010968 hsa-miR-4688 1 1 0
chr12:113010818|113010968 hsa-miR-4689 1 0 0
chr12:113010818|113010968 hsa-miR-4692 1 0 0
chr12:113010818|113010968 hsa-miR-4739 1 0 0
chr12:113010818|113010968 hsa-miR-4784 1 0 0
chr12:113010818|113010968 hsa-miR-5090 1 0 0
chr12:113010818|113010968 hsa-miR-5681a 0 1 0
chr12:113010818|113010968 hsa-miR-5787 1 0 0
chr12:113010818|113010968 hsa-miR-6085 1 0 0
chr12:113010818|113010968 hsa-miR-6132 1 0 0
chr12:113010818|113010968 hsa-miR-6863 1 0 0
chr12:113010818|113010968 hsa-miR-8056 1 0 0
chr12:113010818|113010968 hsa-miR-211-3p 1 0 0
chr12:113010818|113010968 hsa-miR-4687-3p 1 0 0
chr12:113010818|113010968 hsa-miR-6510-5p 1 1 0
chr12:113010818|113010968 hsa-miR-6728-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3692-5p 0 1 0
chr12:113010818|113010968 hsa-miR-6833-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6873-5p 1 1 0
chr12:113010818|113010968 hsa-miR-4695-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6744-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3064-5p 0 1 0
chr12:113010818|113010968 hsa-miR-6730-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6820-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6727-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6842-3p 1 1 0
chr12:113010818|113010968 hsa-miR-6721-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4655-5p 1 0 0
chr12:113010818|113010968 hsa-miR-197-5p 1 0 0
chr12:113010818|113010968 hsa-miR-8069 1 0 0
chr12:113010818|113010968 hsa-miR-7845-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6768-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3180-3p 1 0 0
chr12:113010818|113010968 hsa-miR-6748-5p 1 0 0
chr12:113010818|113010968 hsa-miR-185-3p 1 0 0
chr12:113010818|113010968 hsa-miR-6829-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6732-5p 1 0 0
chr12:113010818|113010968 hsa-miR-2467-3p 1 0 0
chr12:113010818|113010968 hsa-miR-3150b-3p 1 0 0
chr12:113010818|113010968 hsa-miR-1229-5p 1 0 0
chr12:113010818|113010968 hsa-miR-193b-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3691-5p 1 1 0
chr12:113010818|113010968 hsa-miR-885-3p 1 0 0
chr12:113010818|113010968 hsa-miR-4764-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6823-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6847-5p 1 1 0
chr12:113010818|113010968 hsa-miR-7854-3p 1 0 0
chr12:113010818|113010968 hsa-miR-4787-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6789-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3158-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6828-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6781-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6877-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6895-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3678-3p 1 0 0
chr12:113010818|113010968 hsa-miR-423-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3681-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6832-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6818-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6792-5p 1 0 0
chr12:113010818|113010968 hsa-miR-483-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6767-5p 1 0 0
chr12:113010818|113010968 hsa-miR-1306-3p 1 0 0
chr12:113010818|113010968 hsa-miR-3121-3p 1 0 0
chr12:113010818|113010968 hsa-miR-4520-3p 1 0 0
chr12:113010818|113010968 hsa-miR-3152-3p 1 0 0
chr12:113010818|113010968 hsa-miR-1207-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4763-3p 1 0 0
chr12:113010818|113010968 hsa-miR-6769b-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6816-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6870-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6893-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3180 1 0 0
chr12:113010818|113010968 hsa-miR-5001-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6743-5p 1 1 0
chr12:113010818|113010968 hsa-miR-6754-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6813-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6819-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6851-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6722-3p 1 1 0
chr12:113010818|113010968 hsa-miR-6808-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6875-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3620-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4728-5p 1 0 0
chr12:113010818|113010968 hsa-miR-5196-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6836-5p 1 0 0
chr12:113010818|113010968 hsa-miR-10526-3p 1 0 0
chr12:113010818|113010968 hsa-miR-1909-3p 1 1 0
chr12:113010818|113010968 hsa-miR-328-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4649-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4726-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4749-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6735-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6738-5p 1 0 0
chr12:113010818|113010968 hsa-miR-675-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6846-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6848-5p 1 0 0
chr12:113010818|113010968 hsa-miR-4758-5p 1 0 0
chr12:113010818|113010968 hsa-miR-1910-3p 1 0 0
chr12:113010818|113010968 hsa-miR-6511a-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3940-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6758-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6856-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6736-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6855-5p 1 0 0
chr12:113010818|113010968 hsa-miR-3173-3p 1 0 0
chr12:113010818|113010968 hsa-miR-3679-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6876-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6750-5p 1 0 0
chr12:113010818|113010968 hsa-miR-1185-1-3p 1 1 0
chr12:113010818|113010968 hsa-miR-1185-2-3p 1 1 0
chr12:113010818|113010968 hsa-miR-9851-5p 0 1 0
chr12:113010818|113010968 hsa-miR-3085-3p 0 1 0
chr12:113010818|113010968 hsa-miR-6859-5p 1 1 0
chr12:113010818|113010968 hsa-miR-3619-5p 1 0 0
chr12:113010818|113010968 hsa-miR-6504-5p 0 1 0
chr12:113010818|113010968 hsa-miR-498-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr12:113010818|113010968
ORF Type ORF1
Protein Length 30
Nucleotide Length 90
Protein Sequence MSVSSVYKTLSAPADTDILYASSQPTLSLE
Nucleotide Sequence CTGTCTGTTTCCTCTGTATACAAAACCCTTTCTGCCCCTGCTGACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAGAA
CircID chr12:113010818|113010968
ORF Type ORF2
Protein Length 27
Nucleotide Length 84
Protein Sequence MFPLYTKPFLPLLTQTSSMPAASQPFH
Nucleotide Sequence CTGTTTCCTCTGTATACAAAACCCTTTCTGCCCCTGCTGACACAGACATCCTCTATGCCAGCAGCCAGCCAACCCTTTCATTAG
CircID chr12:113010818|113010968
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MAAGIEDVCVSRGRKGFVYRGNRQDVDELEAPRARSQSYENQGE
Nucleotide Sequence CTGGCTGCTGGCATAGAGGATGTCTGTGTCAGCAGGGGCAGAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAA
CircID chr12:113010818|113010968
ORF Type ORF4
Protein Length 38
Nucleotide Length 114
Protein Sequence MSVSAGAERVLYTEETDRTWMSWKHREQDHRVMRTKGK
Nucleotide Sequence ATGTCTGTGTCAGCAGGGGCAGAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTGGATGAGTTGGAAGCACCGAGAGCAAGATCACAGAGTTATGAGAACCAAGGGGAAA
CircID chr12:113010818|113010968
ORF Type ORF5
Protein Length 31
Nucleotide Length 96
Protein Sequence MKGLAGCWHRGCLCQQGQKGFCIQRKQTGRG
Nucleotide Sequence ATGAAAGGGTTGGCTGGCTGCTGGCATAGAGGATGTCTGTGTCAGCAGGGGCAGAAAGGGTTTTGTATACAGAGGAAACAGACAGGACGTGGATGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab