CircRNA Information

General Information
circRNA Basic Information
CircID chr12:113174721|113175070
Strand +
CircType exon
Host Gene ENSG00000123064.11;
Algorism CIRI2;
Sequence GCTGCCCAAACTGCTGGTGGAATTTGCCCGGGCTGGTGCGTGAGCTGGGGGTGGAGATGGGGGCTGGGGGTCAGGCTGGGGCCTGGGGGCCAGTCCCTCTGCGACTCCCCCACTTTCCCCCATGTCTCCTGCAGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCTGAAGGTGAGGCTGCACCTGTCCCATCCCAGGAGGTTGTGTCCAGGTGGGCCCTGCAGGCCCTGGGCCAGGACCCCGTAAGCCAACACGTGATGCCCTCTCCCCACAGACCTCCTTCTTCCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGCTCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:113174721|113175070 hsa-miR-15a-5p 0 0 1
chr12:113174721|113175070 hsa-miR-15a-3p 0 0 1
chr12:113174721|113175070 hsa-miR-15b-5p 0 0 1
chr12:113174721|113175070 hsa-miR-15b-3p 0 0 1
chr12:113174721|113175070 hsa-miR-195-5p 0 0 1
chr12:113174721|113175070 hsa-miR-195-3p 0 0 1
chr12:113174721|113175070 hsa-miR-424-5p 0 0 1
chr12:113174721|113175070 hsa-miR-424-3p 0 0 1
chr12:113174721|113175070 hsa-miR-193b-5p 0 0 1
chr12:113174721|113175070 hsa-miR-193b-3p 0 0 1
chr12:113174721|113175070 hsa-miR-497-5p 0 0 1
chr12:113174721|113175070 hsa-miR-497-3p 0 0 1
chr12:113174721|113175070 hsa-miR-552-5p 0 0 1
chr12:113174721|113175070 hsa-miR-552-3p 0 0 1
chr12:113174721|113175070 hsa-miR-619-5p 0 0 1
chr12:113174721|113175070 hsa-miR-619-3p 0 0 1
chr12:113174721|113175070 hsa-miR-625-5p 0 0 1
chr12:113174721|113175070 hsa-miR-625-3p 0 0 1
chr12:113174721|113175070 hsa-miR-634 0 0 1
chr12:113174721|113175070 hsa-miR-939-5p 0 0 1
chr12:113174721|113175070 hsa-miR-939-3p 0 0 1
chr12:113174721|113175070 hsa-miR-1226-5p 0 0 1
chr12:113174721|113175070 hsa-miR-1226-3p 0 0 1
chr12:113174721|113175070 hsa-miR-1205 0 1 1
chr12:113174721|113175070 hsa-miR-1286 0 0 1
chr12:113174721|113175070 hsa-miR-1255a 0 1 1
chr12:113174721|113175070 hsa-miR-1275 0 1 1
chr12:113174721|113175070 hsa-miR-491-5p 0 0 1
chr12:113174721|113175070 hsa-miR-615-5p 0 0 1
chr12:113174721|113175070 hsa-miR-361-3p 0 1 1
chr12:113174721|113175070 hsa-miR-1224-3p 0 0 1
chr12:113174721|113175070 hsa-miR-1207-3p 0 0 1
chr12:113174721|113175070 hsa-miR-1302 0 0 1
chr12:113174721|113175070 hsa-miR-193a-3p 0 1 1
chr12:113174721|113175070 hsa-miR-16 0 0 1
chr12:113174721|113175070 hsa-miR-1255b 0 0 1
chr12:113174721|113175070 hsa-miR-612 0 1 0
chr12:113174721|113175070 hsa-miR-638 1 0 0
chr12:113174721|113175070 hsa-miR-663a 1 0 0
chr12:113174721|113175070 hsa-miR-658 1 0 0
chr12:113174721|113175070 hsa-miR-764 0 1 0
chr12:113174721|113175070 hsa-miR-760 1 0 0
chr12:113174721|113175070 hsa-miR-1183 1 0 0
chr12:113174721|113175070 hsa-miR-1538 0 1 0
chr12:113174721|113175070 hsa-miR-3125 1 0 0
chr12:113174721|113175070 hsa-miR-3175 1 1 0
chr12:113174721|113175070 hsa-miR-3185 1 1 0
chr12:113174721|113175070 hsa-miR-4298 0 1 0
chr12:113174721|113175070 hsa-miR-4316 0 1 0
chr12:113174721|113175070 hsa-miR-4253 1 0 0
chr12:113174721|113175070 hsa-miR-3918 0 1 0
chr12:113174721|113175070 hsa-miR-3943 0 1 0
chr12:113174721|113175070 hsa-miR-4453 0 1 0
chr12:113174721|113175070 hsa-miR-4488 1 0 0
chr12:113174721|113175070 hsa-miR-4510 0 1 0
chr12:113174721|113175070 hsa-miR-4515 1 1 0
chr12:113174721|113175070 hsa-miR-4538 1 0 0
chr12:113174721|113175070 hsa-miR-4651 1 0 0
chr12:113174721|113175070 hsa-miR-4688 1 0 0
chr12:113174721|113175070 hsa-miR-4689 1 0 0
chr12:113174721|113175070 hsa-miR-4706 1 0 0
chr12:113174721|113175070 hsa-miR-4721 1 0 0
chr12:113174721|113175070 hsa-miR-4739 1 0 0
chr12:113174721|113175070 hsa-miR-5090 1 0 0
chr12:113174721|113175070 hsa-miR-5092 0 1 0
chr12:113174721|113175070 hsa-miR-5698 0 1 0
chr12:113174721|113175070 hsa-miR-6069 1 0 0
chr12:113174721|113175070 hsa-miR-6081 1 1 0
chr12:113174721|113175070 hsa-miR-6127 1 0 0
chr12:113174721|113175070 hsa-miR-6165 1 0 0
chr12:113174721|113175070 hsa-miR-8085 1 1 0
chr12:113174721|113175070 hsa-miR-8089 1 0 0
chr12:113174721|113175070 hsa-miR-10226 1 0 0
chr12:113174721|113175070 hsa-miR-12115 0 1 0
chr12:113174721|113175070 hsa-miR-12118 0 1 0
chr12:113174721|113175070 hsa-miR-12119 1 0 0
chr12:113174721|113175070 hsa-miR-4747-3p 1 0 0
chr12:113174721|113175070 hsa-miR-92a-2-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4726-3p 0 1 0
chr12:113174721|113175070 hsa-miR-149-5p 0 1 0
chr12:113174721|113175070 hsa-miR-3150a-3p 1 1 0
chr12:113174721|113175070 hsa-miR-7106-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6894-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6857-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6720-5p 1 1 0
chr12:113174721|113175070 hsa-miR-766-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6728-5p 0 1 0
chr12:113174721|113175070 hsa-miR-7114-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6089 1 0 0
chr12:113174721|113175070 hsa-miR-1225-3p 0 1 0
chr12:113174721|113175070 hsa-miR-4695-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6746-5p 1 0 0
chr12:113174721|113175070 hsa-miR-593-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6721-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6849-3p 1 1 0
chr12:113174721|113175070 hsa-miR-6742-5p 1 0 0
chr12:113174721|113175070 hsa-miR-3151-5p 1 0 0
chr12:113174721|113175070 hsa-miR-1292-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6796-5p 1 1 0
chr12:113174721|113175070 hsa-miR-185-3p 1 0 0
chr12:113174721|113175070 hsa-miR-6805-5p 1 0 0
chr12:113174721|113175070 hsa-miR-2467-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6810-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6786-5p 1 0 0
chr12:113174721|113175070 hsa-miR-7109-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6753-5p 1 0 0
chr12:113174721|113175070 hsa-miR-92b-5p 1 1 0
chr12:113174721|113175070 hsa-miR-4743-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4638-3p 1 1 0
chr12:113174721|113175070 hsa-miR-3690 0 1 0
chr12:113174721|113175070 hsa-miR-149-3p 1 0 0
chr12:113174721|113175070 hsa-miR-378a-5p 0 1 0
chr12:113174721|113175070 hsa-miR-3616-3p 1 1 0
chr12:113174721|113175070 hsa-miR-6736-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6769a-3p 0 1 0
chr12:113174721|113175070 hsa-miR-7112-5p 1 0 0
chr12:113174721|113175070 hsa-miR-345-5p 0 1 0
chr12:113174721|113175070 hsa-miR-4687-5p 0 1 0
chr12:113174721|113175070 hsa-miR-7112-3p 1 0 0
chr12:113174721|113175070 hsa-miR-3605-3p 0 1 0
chr12:113174721|113175070 hsa-miR-3151-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6859-3p 0 1 0
chr12:113174721|113175070 hsa-miR-2277-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4750-3p 0 1 0
chr12:113174721|113175070 hsa-miR-4796-3p 0 1 0
chr12:113174721|113175070 hsa-miR-16-5p 0 1 0
chr12:113174721|113175070 hsa-miR-1233-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4763-3p 1 0 0
chr12:113174721|113175070 hsa-miR-6787-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6812-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6816-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6870-5p 1 1 0
chr12:113174721|113175070 hsa-miR-6775-5p 1 0 0
chr12:113174721|113175070 hsa-miR-1343-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6743-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6752-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6756-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6803-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6851-5p 1 0 0
chr12:113174721|113175070 hsa-miR-7110-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6722-3p 1 0 0
chr12:113174721|113175070 hsa-miR-6763-5p 1 1 0
chr12:113174721|113175070 hsa-miR-6779-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6797-5p 1 0 0
chr12:113174721|113175070 hsa-miR-7111-5p 1 1 0
chr12:113174721|113175070 hsa-miR-4728-5p 1 0 0
chr12:113174721|113175070 hsa-miR-5189-5p 1 0 0
chr12:113174721|113175070 hsa-miR-5196-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6780b-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6836-5p 1 1 0
chr12:113174721|113175070 hsa-miR-10526-3p 1 0 0
chr12:113174721|113175070 hsa-miR-4632-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4649-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4685-5p 0 1 0
chr12:113174721|113175070 hsa-miR-4725-3p 1 0 0
chr12:113174721|113175070 hsa-miR-4745-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4749-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6729-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6735-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6794-5p 1 0 0
chr12:113174721|113175070 hsa-miR-3199 0 1 0
chr12:113174721|113175070 hsa-miR-30c-1-3p 1 0 0
chr12:113174721|113175070 hsa-miR-6731-5p 1 1 0
chr12:113174721|113175070 hsa-miR-4665-5p 0 1 0
chr12:113174721|113175070 hsa-miR-4700-5p 1 0 0
chr12:113174721|113175070 hsa-miR-4646-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6891-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6785-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6724-5p 1 0 0
chr12:113174721|113175070 hsa-miR-6837-5p 0 1 0
chr12:113174721|113175070 hsa-miR-10392-3p 1 1 0
chr12:113174721|113175070 hsa-miR-6819-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6891-3p 0 1 0
chr12:113174721|113175070 hsa-miR-10394-5p 0 1 0
chr12:113174721|113175070 hsa-miR-1234-3p 0 1 0
chr12:113174721|113175070 hsa-miR-6764-5p 0 1 0
chr12:113174721|113175070 hsa-miR-6838-5p 0 1 0
chr12:113174721|113175070 hsa-miR-1255b-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:113174721|113175070
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MGVRLGPGGQSLCDSPTFPHVSCRPHGARAHPA
Nucleotide Sequence CTGGGGGTCAGGCTGGGGCCTGGGGGCCAGTCCCTCTGCGACTCCCCCACTTTCCCCCATGTCTCCTGCAGGCCTCACGGAGCCCGTGCTCATCCGGCTTGA
CircID chr12:113174721|113175070
ORF Type ORF2
Protein Length 35
Nucleotide Length 105
Protein Sequence MQALGQDPVSQHVMPSPHRPPSSSCGRTPRLPCCS
Nucleotide Sequence CTGCAGGCCCTGGGCCAGGACCCCGTAAGCCAACACGTGATGCCCTCTCCCCACAGACCTCCTTCTTCCTCGTGCGGGAGGACACCAAGGCTGCCGTGCTGCTCC
CircID chr12:113174721|113175070
ORF Type ORF3
Protein Length 62
Nucleotide Length 189
Protein Sequence MGASPSATPPLSPMSPAGLTEPVLIRLDVDTKLNEQLKVRLHLSHPRRLCPGGPCRPWARTP
Nucleotide Sequence CTGGGGGCCAGTCCCTCTGCGACTCCCCCACTTTCCCCCATGTCTCCTGCAGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCTGAAGGTGAGGCTGCACCTGTCCCATCCCAGGAGGTTGTGTCCAGGTGGGCCCTGCAGGCCCTGGGCCAGGACCCCGTAA
CircID chr12:113174721|113175070
ORF Type ORF4
Protein Length 56
Nucleotide Length 171
Protein Sequence MPGLVRELGVEMGAGGQAGAWGPVPLRLPHFPPCLLQASRSPCSSGLTWIPSSTSS
Nucleotide Sequence TTGCCCGGGCTGGTGCGTGAGCTGGGGGTGGAGATGGGGGCTGGGGGTCAGGCTGGGGCCTGGGGGCCAGTCCCTCTGCGACTCCCCCACTTTCCCCCATGTCTCCTGCAGGCCTCACGGAGCCCGTGCTCATCCGGCTTGACGTGGATACCAAGCTCAACGAGCAGCTGA
CircID chr12:113174721|113175070
ORF Type ORF5
Protein Length 39
Nucleotide Length 120
Protein Sequence MWGEGITCWLTGSWPRACRAHLDTTSWDGTGAASPSAAR
Nucleotide Sequence CTGTGGGGAGAGGGCATCACGTGTTGGCTTACGGGGTCCTGGCCCAGGGCCTGCAGGGCCCACCTGGACACAACCTCCTGGGATGGGACAGGTGCAGCCTCACCTTCAGCTGCTCGTTGA
CircID chr12:113174721|113175070
ORF Type ORF6
Protein Length 44
Nucleotide Length 132
Protein Sequence MQETWGKVGESQRDWPPGPSLTPSPHLHPQLTHQPGQIPPAVWA
Nucleotide Sequence CTGCAGGAGACATGGGGGAAAGTGGGGGAGTCGCAGAGGGACTGGCCCCCAGGCCCCAGCCTGACCCCCAGCCCCCATCTCCACCCCCAGCTCACGCACCAGCCCGGGCAAATTCCACCAGCAGTTTGGGCA
CircID chr12:113174721|113175070
ORF Type ORF7
Protein Length 86
Nucleotide Length 261
Protein Sequence MVSSRTRKKEVCGERASRVGLRGPGPGPAGPTWTQPPGMGQVQPHLQLLVELGIHVKPDEHGLREACRRHGGKWGSRRGTGPQAPA
Nucleotide Sequence TTGGTGTCCTCCCGCACGAGGAAGAAGGAGGTCTGTGGGGAGAGGGCATCACGTGTTGGCTTACGGGGTCCTGGCCCAGGGCCTGCAGGGCCCACCTGGACACAACCTCCTGGGATGGGACAGGTGCAGCCTCACCTTCAGCTGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCCTGCAGGAGACATGGGGGAAAGTGGGGGAGTCGCAGAGGGACTGGCCCCCAGGCCCCAGCCTGA
CircID chr12:113174721|113175070
ORF Type ORF8
Protein Length 92
Nucleotide Length 276
Protein Sequence MAYGVLAQGLQGPPGHNLLGWDRCSLTFSCSLSLVSTSSRMSTGSVRPAGDMGESGGVAEGLAPRPQPDPQPPSPPPAHAPARANSTSSLGS
Nucleotide Sequence TTGGCTTACGGGGTCCTGGCCCAGGGCCTGCAGGGCCCACCTGGACACAACCTCCTGGGATGGGACAGGTGCAGCCTCACCTTCAGCTGCTCGTTGAGCTTGGTATCCACGTCAAGCCGGATGAGCACGGGCTCCGTGAGGCCTGCAGGAGACATGGGGGAAAGTGGGGGAGTCGCAGAGGGACTGGCCCCCAGGCCCCAGCCTGACCCCCAGCCCCCATCTCCACCCCCAGCTCACGCACCAGCCCGGGCAAATTCCACCAGCAGTTTGGGCAGC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab