CircRNA Information

General Information
circRNA Basic Information
CircID chr12:113296913|113297070
Strand -
CircType exon
Host Gene ENSG00000186815.11;
Algorism CIRI2;
Sequence CCGTTCAAGCAAAACAACGTTTTGGTTAACTAAGGATTGTGCTAAAGCCGATACCAGGTCCTTCACACGTGTGCACTAGGAACAGGAGCGAACAGCACAGAGAGACGCTCCCTGTGGGACGCAGCAGCCCCGTGGCCCCGGCCCAGTTCCCAGCCACC
circRNA Expression in different cancers

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circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:113296913|113297070 hsa-miR-130a-5p 0 0 1
chr12:113296913|113297070 hsa-miR-130a-3p 0 0 1
chr12:113296913|113297070 hsa-miR-301a-5p 0 0 1
chr12:113296913|113297070 hsa-miR-301a-3p 0 0 1
chr12:113296913|113297070 hsa-miR-130b-5p 0 0 1
chr12:113296913|113297070 hsa-miR-130b-3p 0 0 1
chr12:113296913|113297070 hsa-miR-384 0 0 1
chr12:113296913|113297070 hsa-miR-492 0 0 1
chr12:113296913|113297070 hsa-miR-631 0 0 1
chr12:113296913|113297070 hsa-miR-454-5p 0 0 1
chr12:113296913|113297070 hsa-miR-454-3p 0 0 1
chr12:113296913|113297070 hsa-miR-887-5p 0 0 1
chr12:113296913|113297070 hsa-miR-887-3p 0 0 1
chr12:113296913|113297070 hsa-miR-301b-5p 0 0 1
chr12:113296913|113297070 hsa-miR-301b-3p 0 0 1
chr12:113296913|113297070 hsa-miR-1292-5p 0 0 1
chr12:113296913|113297070 hsa-miR-1292-3p 0 0 1
chr12:113296913|113297070 hsa-miR-1252-5p 0 0 1
chr12:113296913|113297070 hsa-miR-1252-3p 0 0 1
chr12:113296913|113297070 hsa-miR-188-3p 0 1 1
chr12:113296913|113297070 hsa-miR-220c 0 0 1
chr12:113296913|113297070 hsa-miR-500 0 0 1
chr12:113296913|113297070 hsa-miR-637 1 0 0
chr12:113296913|113297070 hsa-miR-663a 1 0 0
chr12:113296913|113297070 hsa-miR-762 1 1 0
chr12:113296913|113297070 hsa-miR-1538 1 0 0
chr12:113296913|113297070 hsa-miR-2861 1 0 0
chr12:113296913|113297070 hsa-miR-3195 1 0 0
chr12:113296913|113297070 hsa-miR-3196 1 0 0
chr12:113296913|113297070 hsa-miR-3661 0 1 0
chr12:113296913|113297070 hsa-miR-3911 1 0 0
chr12:113296913|113297070 hsa-miR-4449 1 0 0
chr12:113296913|113297070 hsa-miR-4463 1 0 0
chr12:113296913|113297070 hsa-miR-4471 0 1 0
chr12:113296913|113297070 hsa-miR-4492 1 0 0
chr12:113296913|113297070 hsa-miR-4498 1 0 0
chr12:113296913|113297070 hsa-miR-4505 1 1 0
chr12:113296913|113297070 hsa-miR-4508 1 0 0
chr12:113296913|113297070 hsa-miR-1587 1 0 0
chr12:113296913|113297070 hsa-miR-4656 1 0 0
chr12:113296913|113297070 hsa-miR-4674 1 0 0
chr12:113296913|113297070 hsa-miR-4741 1 0 0
chr12:113296913|113297070 hsa-miR-5787 1 1 0
chr12:113296913|113297070 hsa-miR-6069 1 0 0
chr12:113296913|113297070 hsa-miR-6080 0 1 0
chr12:113296913|113297070 hsa-miR-6860 1 0 0
chr12:113296913|113297070 hsa-miR-7704 1 0 0
chr12:113296913|113297070 hsa-miR-8080 1 0 0
chr12:113296913|113297070 hsa-miR-8089 1 1 0
chr12:113296913|113297070 hsa-miR-6861-5p 1 0 0
chr12:113296913|113297070 hsa-miR-7847-3p 1 0 0
chr12:113296913|113297070 hsa-miR-6727-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6842-3p 0 1 0
chr12:113296913|113297070 hsa-miR-3187-3p 1 0 0
chr12:113296913|113297070 hsa-miR-6721-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6873-3p 0 1 0
chr12:113296913|113297070 hsa-miR-185-3p 0 1 0
chr12:113296913|113297070 hsa-miR-6829-5p 1 1 0
chr12:113296913|113297070 hsa-miR-6805-5p 1 0 0
chr12:113296913|113297070 hsa-miR-939-3p 1 0 0
chr12:113296913|113297070 hsa-miR-6772-3p 1 1 0
chr12:113296913|113297070 hsa-miR-1229-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6784-5p 1 1 0
chr12:113296913|113297070 hsa-miR-4640-5p 1 0 0
chr12:113296913|113297070 hsa-miR-1228-5p 1 0 0
chr12:113296913|113297070 hsa-miR-92b-5p 1 0 0
chr12:113296913|113297070 hsa-miR-4743-5p 1 0 0
chr12:113296913|113297070 hsa-miR-3648 1 0 0
chr12:113296913|113297070 hsa-miR-6781-5p 1 1 0
chr12:113296913|113297070 hsa-miR-6877-5p 1 0 0
chr12:113296913|113297070 hsa-miR-500a-5p 0 1 0
chr12:113296913|113297070 hsa-miR-6816-3p 0 1 0
chr12:113296913|113297070 hsa-miR-1207-5p 1 0 0
chr12:113296913|113297070 hsa-miR-4763-3p 1 0 0
chr12:113296913|113297070 hsa-miR-6787-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6816-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6775-5p 1 0 0
chr12:113296913|113297070 hsa-miR-5001-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6726-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6756-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6819-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6779-5p 1 0 0
chr12:113296913|113297070 hsa-miR-3620-5p 1 0 0
chr12:113296913|113297070 hsa-miR-1909-3p 1 0 0
chr12:113296913|113297070 hsa-miR-939-5p 1 0 0
chr12:113296913|113297070 hsa-miR-4646-5p 0 1 0
chr12:113296913|113297070 hsa-miR-6724-5p 1 0 0
chr12:113296913|113297070 hsa-miR-6762-5p 1 1 0
chr12:113296913|113297070 hsa-miR-769-3p 1 0 0
chr12:113296913|113297070 hsa-miR-6837-5p 1 0 0
chr12:113296913|113297070 hsa-miR-4756-5p 1 0 0
chr12:113296913|113297070 hsa-miR-362-5p 0 1 0
chr12:113296913|113297070 hsa-miR-6737-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:113296913|113297070
ORF Type ORF1
Protein Length 27
Nucleotide Length 84
Protein Sequence MGRGHGAAASHRERLSVLFAPVPSAHV
Nucleotide Sequence CTGGGCCGGGGCCACGGGGCTGCTGCGTCCCACAGGGAGCGTCTCTCTGTGCTGTTCGCTCCTGTTCCTAGTGCACACGTGTGA
CircID chr12:113296913|113297070
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MLRPTGSVSLCCSLLFLVHTCEGPGIGFSTILS
Nucleotide Sequence CTGCTGCGTCCCACAGGGAGCGTCTCTCTGTGCTGTTCGCTCCTGTTCCTAGTGCACACGTGTGAAGGACCTGGTATCGGCTTTAGCACAATCCTTAGTTAA
CircID chr12:113296913|113297070
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MGTGPGPRGCCVPQGASLCAVRSCS
Nucleotide Sequence CTGGGAACTGGGCCGGGGCCACGGGGCTGCTGCGTCCCACAGGGAGCGTCTCTCTGTGCTGTTCGCTCCTGTTCCTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab