CircRNA Information

General Information
circRNA Basic Information
CircID chr12:113392583|113392783
Strand -
CircType exon
Host Gene ENSG00000135094.9;
Algorism CIRI2;
Sequence TGGGAACAAGTTCAGGGGCGAGGTCACAGCTTTGAGGAATTCCTCACTGCTGTGATTCAGGTCTCTCCTGTCCACCCTGCTCTGGGTACCTGGTGTGTTACTTGTGGGCACTTGTCACGCCAGCAAGTTGGCTAAGGATGGGCACAGAGCAGTCACACAGATACCAAAAAGGTCCAATTCATAGCCTCGCTGGCTGCCGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:113392583|113392783 hsa-miR-134-5p 0 0 1
chr12:113392583|113392783 hsa-miR-134-3p 0 0 1
chr12:113392583|113392783 hsa-miR-185-5p 0 0 1
chr12:113392583|113392783 hsa-miR-185-3p 0 0 1
chr12:113392583|113392783 hsa-miR-320a-5p 0 0 1
chr12:113392583|113392783 hsa-miR-320a-3p 0 0 1
chr12:113392583|113392783 hsa-miR-492 0 0 1
chr12:113392583|113392783 hsa-miR-802 0 0 1
chr12:113392583|113392783 hsa-miR-769-5p 0 0 1
chr12:113392583|113392783 hsa-miR-330-3p 0 0 1
chr12:113392583|113392783 hsa-miR-320b 0 0 1
chr12:113392583|113392783 hsa-miR-320c 0 0 1
chr12:113392583|113392783 hsa-miR-320d 0 0 1
chr12:113392583|113392783 hsa-miR-362-3p 0 0 1
chr12:113392583|113392783 hsa-miR-219-2-3p 0 0 1
chr12:113392583|113392783 hsa-miR-329 0 0 1
chr12:113392583|113392783 hsa-miR-571 1 0 0
chr12:113392583|113392783 hsa-miR-3138 0 1 0
chr12:113392583|113392783 hsa-miR-4780 0 1 0
chr12:113392583|113392783 hsa-miR-5691 0 1 0
chr12:113392583|113392783 hsa-miR-6745 0 1 0
chr12:113392583|113392783 hsa-miR-7974 0 1 0
chr12:113392583|113392783 hsa-miR-6510-5p 0 1 0
chr12:113392583|113392783 hsa-miR-8071 0 1 0
chr12:113392583|113392783 hsa-miR-6753-5p 1 0 0
chr12:113392583|113392783 hsa-miR-4733-3p 0 1 0
chr12:113392583|113392783 hsa-miR-6889-3p 0 1 0
chr12:113392583|113392783 hsa-miR-6501-3p 0 1 0
chr12:113392583|113392783 hsa-miR-3177-5p 1 0 0
chr12:113392583|113392783 hsa-miR-371b-3p 0 1 0
chr12:113392583|113392783 hsa-miR-6808-3p 0 1 0
chr12:113392583|113392783 hsa-miR-758-3p 0 1 0
chr12:113392583|113392783 hsa-miR-1207-5p 0 1 0
chr12:113392583|113392783 hsa-miR-6879-5p 0 1 0
chr12:113392583|113392783 hsa-miR-6735-5p 0 1 0
chr12:113392583|113392783 hsa-miR-1271-3p 1 0 0
chr12:113392583|113392783 hsa-miR-541-3p 0 1 0
chr12:113392583|113392783 hsa-miR-5009-5p 0 1 0
chr12:113392583|113392783 hsa-miR-6529-5p 0 1 0
chr12:113392583|113392783 hsa-miR-6805-3p 0 1 0
chr12:113392583|113392783 hsa-miR-3118 0 1 0
chr12:113392583|113392783 hsa-miR-6820-3p 0 1 0
chr12:113392583|113392783 hsa-miR-329-3p 0 1 0
chr12:113392583|113392783 hsa-miR-1912-3p 0 1 0
chr12:113392583|113392783 hsa-miR-3140-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:113392583|113392783
ORF Type ORF1
Protein Length 38
Nucleotide Length 117
Protein Sequence MSTLLWVPGVLLVGTCHASKLAKDGHRAVTQIPKRSNS
Nucleotide Sequence CTGTCCACCCTGCTCTGGGTACCTGGTGTGTTACTTGTGGGCACTTGTCACGCCAGCAAGTTGGCTAAGGATGGGCACAGAGCAGTCACACAGATACCAAAAAGGTCCAATTCATAG

CircID chr12:113392583|113392783
ORF Type ORF2
Protein Length 37
Nucleotide Length 111
Protein Sequence MVCYLWALVTPASWLRMGTEQSHRYQKGPIHSLAGCR
Nucleotide Sequence CTGGTGTGTTACTTGTGGGCACTTGTCACGCCAGCAAGTTGGCTAAGGATGGGCACAGAGCAGTCACACAGATACCAAAAAGGTCCAATTCATAGCCTCGCTGGCTGCCGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites