CircRNA Information

General Information
circRNA Basic Information
CircID chr12:117144321|117144491
Strand +
CircType exon
Host Gene ENSG00000135108.13;
Algorism CIRI2;
Sequence CACTTCATAGCAAGGGAAGGCTTTAAGCAGTTACTAGAAAGAGATGGGGATTTGGCCCCTGGCTCCTCCAGCCTGAATGAGCTATTTAATCCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGCATCTGGAAACGTAACCACTCACAGCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:117144321|117144491 hsa-miR-204-5p 0 0 1
chr12:117144321|117144491 hsa-miR-204-3p 0 0 1
chr12:117144321|117144491 hsa-miR-211-5p 0 0 1
chr12:117144321|117144491 hsa-miR-211-3p 0 0 1
chr12:117144321|117144491 hsa-miR-325 0 0 1
chr12:117144321|117144491 hsa-miR-484 0 0 1
chr12:117144321|117144491 hsa-miR-573 0 0 1
chr12:117144321|117144491 hsa-miR-605-5p 0 0 1
chr12:117144321|117144491 hsa-miR-605-3p 0 0 1
chr12:117144321|117144491 hsa-miR-607 0 0 1
chr12:117144321|117144491 hsa-miR-623 0 0 1
chr12:117144321|117144491 hsa-miR-657 0 0 1
chr12:117144321|117144491 hsa-miR-802 0 0 1
chr12:117144321|117144491 hsa-miR-765 0 0 1
chr12:117144321|117144491 hsa-miR-943 0 0 1
chr12:117144321|117144491 hsa-miR-1290 0 0 1
chr12:117144321|117144491 hsa-miR-140-5p 0 0 1
chr12:117144321|117144491 hsa-miR-525-5p 0 0 1
chr12:117144321|117144491 hsa-miR-628-3p 0 0 1
chr12:117144321|117144491 hsa-miR-501-5p 0 0 1
chr12:117144321|117144491 hsa-miR-409-5p 0 0 1
chr12:117144321|117144491 hsa-miR-520a-5p 0 0 1
chr12:117144321|117144491 hsa-miR-876-5p 0 0 1
chr12:117144321|117144491 hsa-miR-500 0 0 1
chr12:117144321|117144491 hsa-miR-762 1 0 0
chr12:117144321|117144491 hsa-miR-3138 1 0 0
chr12:117144321|117144491 hsa-miR-3197 1 0 0
chr12:117144321|117144491 hsa-miR-3652 1 0 0
chr12:117144321|117144491 hsa-miR-4689 1 0 0
chr12:117144321|117144491 hsa-miR-5192 1 0 0
chr12:117144321|117144491 hsa-miR-5787 1 0 0
chr12:117144321|117144491 hsa-miR-6860 1 0 0
chr12:117144321|117144491 hsa-miR-12115 1 0 0
chr12:117144321|117144491 hsa-miR-134-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6894-5p 1 0 0
chr12:117144321|117144491 hsa-miR-7845-5p 1 0 0
chr12:117144321|117144491 hsa-miR-5088-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6834-5p 1 0 0
chr12:117144321|117144491 hsa-miR-7843-3p 1 0 0
chr12:117144321|117144491 hsa-miR-6781-5p 1 0 0
chr12:117144321|117144491 hsa-miR-1225-5p 1 0 0
chr12:117144321|117144491 hsa-miR-4763-3p 1 0 0
chr12:117144321|117144491 hsa-miR-6778-5p 1 0 0
chr12:117144321|117144491 hsa-miR-5001-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6743-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6763-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6875-5p 1 0 0
chr12:117144321|117144491 hsa-miR-449c-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6858-5p 1 0 0
chr12:117144321|117144491 hsa-miR-3187-5p 1 0 0
chr12:117144321|117144491 hsa-miR-1238-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6750-5p 1 0 0
chr12:117144321|117144491 hsa-miR-6859-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


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circRNA Open Reading Frame (ORF)
CircID chr12:117144321|117144491
ORF Type ORF1
Protein Length 28
Nucleotide Length 87
Protein Sequence MAPGSSSLNELFNPLSMFLISQIQSQRI
Nucleotide Sequence TTGGCCCCTGGCTCCTCCAGCCTGAATGAGCTATTTAATCCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGA

CircID chr12:117144321|117144491
ORF Type ORF2
Protein Length 31
Nucleotide Length 93
Protein Sequence MSYLIHCPCSSSVKSKVKGFEPASGNVTTHS
Nucleotide Sequence ATGAGCTATTTAATCCACTGTCCATGTTCCTCATCAGTCAAATCCAAAGTCAAAGGATTTGAACCTGCATCTGGAAACGTAACCACTCACAGC

CircID chr12:117144321|117144491
ORF Type ORF3
Protein Length 37
Nucleotide Length 111
Protein Sequence MMRNMDSGLNSSFRLEEPGAKSPSLSSNCLKPSLAMK
Nucleotide Sequence CTGATGAGGAACATGGACAGTGGATTAAATAGCTCATTCAGGCTGGAGGAGCCAGGGGCCAAATCCCCATCTCTTTCTAGTAACTGCTTAAAGCCTTCCCTTGCTATGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites