CircNet

General Information

circRNA Basic Information

CircID	chr12:118172481\|118172660
Strand	-
CircType	exon
Host Gene	ENSG00000135090.12;
Algorism	CIRI2;
Sequence	CTCGTGCCGCTTGATCATTATTTTCCGCTTGAAGAAACGACAATTTTTGTCGTAGTACAGTCTCTGTTGAGTGAGAAGGTGGGCTTCCTCTTCAGCCTGTGTGTGCTGCAAGTTCTCTTTATGTTTGGAGATCCGCTCTTGCTTCTCTTTCTTGGGTGTGCTATGGTCCTCATTCATTTC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:118172481\|118172660	hsa-miR-107	0	0	1
chr12:118172481\|118172660	hsa-miR-146a-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-146a-3p	0	0	1
chr12:118172481\|118172660	hsa-miR-335-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-335-3p	0	0	1
chr12:118172481\|118172660	hsa-miR-498-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-498-3p	0	0	1
chr12:118172481\|118172660	hsa-miR-583	0	0	1
chr12:118172481\|118172660	hsa-miR-421	0	0	1
chr12:118172481\|118172660	hsa-miR-1301-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-1301-3p	0	0	1
chr12:118172481\|118172660	hsa-miR-1229-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-1229-3p	0	0	1
chr12:118172481\|118172660	hsa-miR-1276	0	0	1
chr12:118172481\|118172660	hsa-miR-671-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-1224-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-1224-3p	0	1	1
chr12:118172481\|118172660	hsa-miR-146b-5p	1	1	1
chr12:118172481\|118172660	hsa-miR-515-5p	0	0	1
chr12:118172481\|118172660	hsa-miR-103	0	0	1
chr12:118172481\|118172660	hsa-miR-922	0	1	0
chr12:118172481\|118172660	hsa-miR-1248	0	1	0
chr12:118172481\|118172660	hsa-miR-4311	0	1	0
chr12:118172481\|118172660	hsa-miR-3929	0	1	0
chr12:118172481\|118172660	hsa-miR-4656	1	1	0
chr12:118172481\|118172660	hsa-miR-4657	1	0	0
chr12:118172481\|118172660	hsa-miR-4739	1	0	0
chr12:118172481\|118172660	hsa-miR-4751	1	1	0
chr12:118172481\|118172660	hsa-miR-8064	1	0	0
chr12:118172481\|118172660	hsa-miR-4709-3p	0	1	0
chr12:118172481\|118172660	hsa-miR-6768-5p	0	1	0
chr12:118172481\|118172660	hsa-miR-1226-5p	1	0	0
chr12:118172481\|118172660	hsa-miR-6895-5p	1	0	0
chr12:118172481\|118172660	hsa-miR-5004-5p	1	0	0
chr12:118172481\|118172660	hsa-miR-3680-5p	1	1	0
chr12:118172481\|118172660	hsa-miR-4726-5p	1	0	0
chr12:118172481\|118172660	hsa-miR-519e-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:118172481\|118172660
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MLSEKVGFLFSLCVLQVLFMFGDPLLLLFLGCAMVLIHF
Nucleotide Sequence	CTGTTGAGTGAGAAGGTGGGCTTCCTCTTCAGCCTGTGTGTGCTGCAAGTTCTCTTTATGTTTGGAGATCCGCTCTTGCTTCTCTTTCTTGGGTGTGCTATGGTCCTCATTCATTTC

CircID	chr12:118172481\|118172660
ORF Type	ORF2
Protein Length	59
Nucleotide Length	177
Protein Sequence	MNEDHSTPKKEKQERISKHKENLQHTQAEEEAHLLTQQRLYYDKNCRFFKRKIMIKRHE
Nucleotide Sequence	ATGAATGAGGACCATAGCACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACTTGCAGCACACACAGGCTGAAGAGGAAGCCCACCTTCTCACTCAACAGAGACTGTACTACGACAAAAATTGTCGTTTCTTCAAGCGGAAAATAATGATCAAGCGGCACGAG

CircID	chr12:118172481\|118172660
ORF Type	ORF3
Protein Length	51
Nucleotide Length	156
Protein Sequence	MRTIAHPRKRSKSGSPNIKRTCSTHRLKRKPTFSLNRDCTTTKIVVSSSGK
Nucleotide Sequence	ATGAGGACCATAGCACACCCAAGAAAGAGAAGCAAGAGCGGATCTCCAAACATAAAGAGAACTTGCAGCACACACAGGCTGAAGAGGAAGCCCACCTTCTCACTCAACAGAGACTGTACTACGACAAAAATTGTCGTTTCTTCAAGCGGAAAATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information