CircRNA Information

General Information
circRNA Basic Information
CircID chr12:120095943|120096155
Strand +
CircType exon
Host Gene ENSG00000111737.10;
Algorism CIRI2;
Sequence TGTGGGGAGTGCATGCCTGGGGCCTCTGGGTGGGGACCATGGACAGGCCCTGGTCACTGTCCTAACCTTTGTCAGGACAAAGGTAGCAAGAGGATTTCCTGGCGGGTGGGAAGGAATGGCTGGGGCGGCCAGTTTTGACACGCCCCAGTGCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCAGCCCGGACAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:120095943|120096155 hsa-miR-193b-5p 0 0 1
chr12:120095943|120096155 hsa-miR-193b-3p 0 0 1
chr12:120095943|120096155 hsa-miR-504-5p 0 0 1
chr12:120095943|120096155 hsa-miR-504-3p 0 0 1
chr12:120095943|120096155 hsa-miR-637 1 0 1
chr12:120095943|120096155 hsa-miR-1323 0 0 1
chr12:120095943|120096155 hsa-miR-766-5p 0 0 1
chr12:120095943|120096155 hsa-miR-766-3p 0 0 1
chr12:120095943|120096155 hsa-miR-939-5p 0 0 1
chr12:120095943|120096155 hsa-miR-939-3p 0 0 1
chr12:120095943|120096155 hsa-miR-548e-5p 0 0 1
chr12:120095943|120096155 hsa-miR-548e-3p 0 0 1
chr12:120095943|120096155 hsa-miR-1258 0 0 1
chr12:120095943|120096155 hsa-miR-548o-3p 0 0 1
chr12:120095943|120096155 hsa-miR-1197 0 0 1
chr12:120095943|120096155 hsa-miR-548o 0 0 1
chr12:120095943|120096155 hsa-miR-542-5p 0 0 1
chr12:120095943|120096155 hsa-miR-1224-3p 0 0 1
chr12:120095943|120096155 hsa-miR-188-3p 0 0 1
chr12:120095943|120096155 hsa-miR-519b-3p 0 0 1
chr12:120095943|120096155 hsa-miR-519c-3p 0 0 1
chr12:120095943|120096155 hsa-miR-193a-3p 0 0 1
chr12:120095943|120096155 hsa-miR-515-5p 0 0 1
chr12:120095943|120096155 hsa-miR-548a-3p 0 1 1
chr12:120095943|120096155 hsa-miR-1260 0 0 1
chr12:120095943|120096155 hsa-miR-1280 0 0 1
chr12:120095943|120096155 hsa-miR-886-5p 0 0 1
chr12:120095943|120096155 hsa-miR-548f 0 0 1
chr12:120095943|120096155 hsa-miR-1268 0 0 1
chr12:120095943|120096155 hsa-miR-453 0 0 1
chr12:120095943|120096155 hsa-miR-519a 0 0 1
chr12:120095943|120096155 hsa-miR-612 1 0 0
chr12:120095943|120096155 hsa-miR-762 1 1 0
chr12:120095943|120096155 hsa-miR-1231 1 0 0
chr12:120095943|120096155 hsa-miR-2861 0 1 0
chr12:120095943|120096155 hsa-miR-3175 1 0 0
chr12:120095943|120096155 hsa-miR-3621 1 0 0
chr12:120095943|120096155 hsa-miR-378g 1 0 0
chr12:120095943|120096155 hsa-miR-4492 0 1 0
chr12:120095943|120096155 hsa-miR-4498 1 0 0
chr12:120095943|120096155 hsa-miR-4505 1 0 0
chr12:120095943|120096155 hsa-miR-4508 1 0 0
chr12:120095943|120096155 hsa-miR-4512 0 1 0
chr12:120095943|120096155 hsa-miR-1587 1 0 0
chr12:120095943|120096155 hsa-miR-4651 1 0 0
chr12:120095943|120096155 hsa-miR-4656 1 0 0
chr12:120095943|120096155 hsa-miR-4669 0 1 0
chr12:120095943|120096155 hsa-miR-4688 1 0 0
chr12:120095943|120096155 hsa-miR-4706 1 0 0
chr12:120095943|120096155 hsa-miR-4741 1 0 0
chr12:120095943|120096155 hsa-miR-5090 1 0 0
chr12:120095943|120096155 hsa-miR-5572 1 0 0
chr12:120095943|120096155 hsa-miR-5787 1 1 0
chr12:120095943|120096155 hsa-miR-6081 1 0 0
chr12:120095943|120096155 hsa-miR-6860 1 0 0
chr12:120095943|120096155 hsa-miR-8089 1 0 0
chr12:120095943|120096155 hsa-miR-12127 0 1 0
chr12:120095943|120096155 hsa-miR-4747-3p 1 0 0
chr12:120095943|120096155 hsa-miR-92a-1-5p 1 1 0
chr12:120095943|120096155 hsa-miR-125b-1-3p 1 0 0
chr12:120095943|120096155 hsa-miR-3150a-3p 1 0 0
chr12:120095943|120096155 hsa-miR-7106-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6881-3p 0 1 0
chr12:120095943|120096155 hsa-miR-593-5p 0 1 0
chr12:120095943|120096155 hsa-miR-874-5p 0 1 0
chr12:120095943|120096155 hsa-miR-6727-5p 1 0 0
chr12:120095943|120096155 hsa-miR-3189-5p 1 0 0
chr12:120095943|120096155 hsa-miR-101-5p 0 1 0
chr12:120095943|120096155 hsa-miR-5008-5p 0 1 0
chr12:120095943|120096155 hsa-miR-6735-3p 0 1 0
chr12:120095943|120096155 hsa-miR-7109-5p 1 0 0
chr12:120095943|120096155 hsa-miR-7108-3p 1 0 0
chr12:120095943|120096155 hsa-miR-3944-3p 1 0 0
chr12:120095943|120096155 hsa-miR-1228-5p 1 0 0
chr12:120095943|120096155 hsa-miR-296-3p 1 0 0
chr12:120095943|120096155 hsa-miR-6823-5p 1 0 0
chr12:120095943|120096155 hsa-miR-92b-5p 1 0 0
chr12:120095943|120096155 hsa-miR-4446-3p 1 0 0
chr12:120095943|120096155 hsa-miR-6824-5p 1 0 0
chr12:120095943|120096155 hsa-miR-5010-5p 1 0 0
chr12:120095943|120096155 hsa-miR-7112-5p 1 0 0
chr12:120095943|120096155 hsa-miR-500a-5p 0 1 0
chr12:120095943|120096155 hsa-miR-4750-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6748-3p 0 1 0
chr12:120095943|120096155 hsa-miR-3162-3p 1 0 0
chr12:120095943|120096155 hsa-miR-6816-5p 1 0 0
chr12:120095943|120096155 hsa-miR-1343-5p 1 1 0
chr12:120095943|120096155 hsa-miR-5001-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6726-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6737-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6743-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6752-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6756-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6803-5p 1 1 0
chr12:120095943|120096155 hsa-miR-6819-5p 1 0 0
chr12:120095943|120096155 hsa-miR-7107-5p 1 0 0
chr12:120095943|120096155 hsa-miR-7110-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6751-5p 1 1 0
chr12:120095943|120096155 hsa-miR-6763-5p 1 0 0
chr12:120095943|120096155 hsa-miR-3620-5p 1 0 0
chr12:120095943|120096155 hsa-miR-328-5p 1 0 0
chr12:120095943|120096155 hsa-miR-4685-5p 0 1 0
chr12:120095943|120096155 hsa-miR-6777-5p 1 1 0
chr12:120095943|120096155 hsa-miR-6846-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6848-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6889-5p 1 1 0
chr12:120095943|120096155 hsa-miR-6885-5p 1 0 0
chr12:120095943|120096155 hsa-miR-3940-5p 1 0 0
chr12:120095943|120096155 hsa-miR-4665-5p 1 0 0
chr12:120095943|120096155 hsa-miR-6855-5p 0 1 0
chr12:120095943|120096155 hsa-miR-4667-5p 1 0 0
chr12:120095943|120096155 hsa-miR-7107-3p 0 1 0
chr12:120095943|120096155 hsa-miR-6837-5p 0 1 0
chr12:120095943|120096155 hsa-miR-7156-5p 0 1 0
chr12:120095943|120096155 hsa-miR-1912-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:120095943|120096155
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MPGASGWGPWTGPGHCPNLCQDKGSKRISWRVGRNGWGGQF
Nucleotide Sequence ATGCCTGGGGCCTCTGGGTGGGGACCATGGACAGGCCCTGGTCACTGTCCTAACCTTTGTCAGGACAAAGGTAGCAAGAGGATTTCCTGGCGGGTGGGAAGGAATGGCTGGGGCGGCCAGTTTTGA
CircID chr12:120095943|120096155
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MGPLGGDHGQALVTVLTFVRTKVARGFPGGWEGMAGAASFDTPQCPGEQPGSSALDDCSPTPSPD
Nucleotide Sequence CTGGGGCCTCTGGGTGGGGACCATGGACAGGCCCTGGTCACTGTCCTAACCTTTGTCAGGACAAAGGTAGCAAGAGGATTTCCTGGCGGGTGGGAAGGAATGGCTGGGGCGGCCAGTTTTGACACGCCCCAGTGCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCAGCCCGGAC
CircID chr12:120095943|120096155
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MAGGKEWLGRPVLTRPSALENNQGHLHLMTAPRPPART
Nucleotide Sequence CTGGCGGGTGGGAAGGAATGGCTGGGGCGGCCAGTTTTGACACGCCCCAGTGCCCTGGAGAACAACCAGGGTCATCTGCACTTGATGACTGCTCCCCGACCCCCAGCCCGGACA
CircID chr12:120095943|120096155
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MGVGEQSSSADDPGCSPGHWGVSKLAAPAIPSHPPGNPLATFVLTKVRTVTRACPWSPPRGPRHALPT
Nucleotide Sequence CTGGGGGTCGGGGAGCAGTCATCAAGTGCAGATGACCCTGGTTGTTCTCCAGGGCACTGGGGCGTGTCAAAACTGGCCGCCCCAGCCATTCCTTCCCACCCGCCAGGAAATCCTCTTGCTACCTTTGTCCTGACAAAGGTTAGGACAGTGACCAGGGCCTGTCCATGGTCCCCACCCAGAGGCCCCAGGCATGCACTCCCCACA
CircID chr12:120095943|120096155
ORF Type ORF5
Protein Length 33
Nucleotide Length 102
Protein Sequence MTLVVLQGTGACQNWPPQPFLPTRQEILLLPLS
Nucleotide Sequence ATGACCCTGGTTGTTCTCCAGGGCACTGGGGCGTGTCAAAACTGGCCGCCCCAGCCATTCCTTCCCACCCGCCAGGAAATCCTCTTGCTACCTTTGTCCTGA
CircID chr12:120095943|120096155
ORF Type ORF6
Protein Length 33
Nucleotide Length 102
Protein Sequence MFSRALGRVKTGRPSHSFPPARKSSCYLCPDKG
Nucleotide Sequence TTGTTCTCCAGGGCACTGGGGCGTGTCAAAACTGGCCGCCCCAGCCATTCCTTCCCACCCGCCAGGAAATCCTCTTGCTACCTTTGTCCTGACAAAGGTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab