CircRNA Information

General Information
circRNA Basic Information
CircID chr12:120155283|120155645
Strand -
CircType exon
Host Gene ENSG00000089154.9;
Algorism CIRI2;
Sequence CTCCGCCGCCTGCCGCTGGTAACGTGCCACTGCTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGCCGCCTCATGATAGATCACGTCGTCAATCAGCAAGGAGCAGAGGTCTGGCTGCAGGTCTAGGCCCATCATTGACCAGAGCCTGTGGGAGATCCAAGGCAGGGGCTGCTTAGACAAAGATCTGCAGCACTTGCCCTGCCAGCCCAGCCCTTCTTCCCACTGGAGGCTGAGCACACTGGGTTCAGTTATTTCCTAAAGGAAGAGAGGATGCAGCAGGAGAAAGCGACATGCTGGCTCTCTCACCTCTCAGCCAGCTTCCGGATCTCCTCCTCCTTGTCAAACTTGACCACCCAGAGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:120155283|120155645 hsa-miR-150-5p 0 0 1
chr12:120155283|120155645 hsa-miR-150-3p 0 0 1
chr12:120155283|120155645 hsa-miR-302a-5p 0 0 1
chr12:120155283|120155645 hsa-miR-302a-3p 0 0 1
chr12:120155283|120155645 hsa-miR-302b-5p 0 0 1
chr12:120155283|120155645 hsa-miR-302b-3p 0 0 1
chr12:120155283|120155645 hsa-miR-302c-5p 0 0 1
chr12:120155283|120155645 hsa-miR-302c-3p 0 0 1
chr12:120155283|120155645 hsa-miR-302d-5p 0 0 1
chr12:120155283|120155645 hsa-miR-302d-3p 0 0 1
chr12:120155283|120155645 hsa-miR-370-5p 0 0 1
chr12:120155283|120155645 hsa-miR-370-3p 0 0 1
chr12:120155283|120155645 hsa-miR-372-5p 0 0 1
chr12:120155283|120155645 hsa-miR-372-3p 0 0 1
chr12:120155283|120155645 hsa-miR-373-5p 0 0 1
chr12:120155283|120155645 hsa-miR-373-3p 0 0 1
chr12:120155283|120155645 hsa-miR-326 0 0 1
chr12:120155283|120155645 hsa-miR-484 0 0 1
chr12:120155283|120155645 hsa-miR-520e-5p 0 0 1
chr12:120155283|120155645 hsa-miR-520e-3p 0 0 1
chr12:120155283|120155645 hsa-miR-520b-5p 0 0 1
chr12:120155283|120155645 hsa-miR-520b-3p 0 0 1
chr12:120155283|120155645 hsa-miR-506-5p 0 0 1
chr12:120155283|120155645 hsa-miR-506-3p 0 0 1
chr12:120155283|120155645 hsa-miR-564 1 0 1
chr12:120155283|120155645 hsa-miR-634 0 0 1
chr12:120155283|120155645 hsa-miR-648 0 0 1
chr12:120155283|120155645 hsa-miR-651-5p 0 0 1
chr12:120155283|120155645 hsa-miR-651-3p 0 0 1
chr12:120155283|120155645 hsa-miR-765 1 0 1
chr12:120155283|120155645 hsa-miR-760 1 0 1
chr12:120155283|120155645 hsa-miR-940 1 0 1
chr12:120155283|120155645 hsa-miR-1236-5p 0 0 1
chr12:120155283|120155645 hsa-miR-1236-3p 0 0 1
chr12:120155283|120155645 hsa-miR-1293 1 0 1
chr12:120155283|120155645 hsa-miR-302e 0 0 1
chr12:120155283|120155645 hsa-miR-1825 0 0 1
chr12:120155283|120155645 hsa-miR-512-3p 0 0 1
chr12:120155283|120155645 hsa-miR-532-3p 0 0 1
chr12:120155283|120155645 hsa-miR-324-5p 0 0 1
chr12:120155283|120155645 hsa-miR-199a-5p 0 0 1
chr12:120155283|120155645 hsa-miR-1184 0 0 1
chr12:120155283|120155645 hsa-miR-502-5p 0 0 1
chr12:120155283|120155645 hsa-miR-767-3p 0 0 1
chr12:120155283|120155645 hsa-miR-188-3p 0 0 1
chr12:120155283|120155645 hsa-miR-628-5p 0 0 1
chr12:120155283|120155645 hsa-miR-199b-5p 0 0 1
chr12:120155283|120155645 hsa-miR-338-3p 0 0 1
chr12:120155283|120155645 hsa-miR-1207-5p 0 0 1
chr12:120155283|120155645 hsa-miR-330-5p 0 0 1
chr12:120155283|120155645 hsa-miR-520d-3p 0 0 1
chr12:120155283|120155645 hsa-miR-520a-3p 0 0 1
chr12:120155283|120155645 hsa-miR-520c-3p 0 0 1
chr12:120155283|120155645 hsa-miR-323-5p 0 0 1
chr12:120155283|120155645 hsa-miR-124 0 0 1
chr12:120155283|120155645 hsa-miR-514 0 0 1
chr12:120155283|120155645 hsa-miR-623 1 0 0
chr12:120155283|120155645 hsa-miR-762 1 0 0
chr12:120155283|120155645 hsa-miR-3155a 1 0 0
chr12:120155283|120155645 hsa-miR-3196 1 0 0
chr12:120155283|120155645 hsa-miR-3937 1 0 0
chr12:120155283|120155645 hsa-miR-4429 1 0 0
chr12:120155283|120155645 hsa-miR-4462 1 0 0
chr12:120155283|120155645 hsa-miR-4498 1 0 0
chr12:120155283|120155645 hsa-miR-4505 1 0 0
chr12:120155283|120155645 hsa-miR-2392 1 0 0
chr12:120155283|120155645 hsa-miR-4507 1 0 0
chr12:120155283|120155645 hsa-miR-4533 1 0 0
chr12:120155283|120155645 hsa-miR-1587 1 0 0
chr12:120155283|120155645 hsa-miR-3960 1 0 0
chr12:120155283|120155645 hsa-miR-4656 1 0 0
chr12:120155283|120155645 hsa-miR-4739 1 0 0
chr12:120155283|120155645 hsa-miR-6081 1 0 0
chr12:120155283|120155645 hsa-miR-6133 1 0 0
chr12:120155283|120155645 hsa-miR-6765-5p 1 0 0
chr12:120155283|120155645 hsa-miR-3150a-3p 1 0 0
chr12:120155283|120155645 hsa-miR-7106-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6825-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6894-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6822-3p 1 0 0
chr12:120155283|120155645 hsa-miR-766-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6880-5p 1 0 0
chr12:120155283|120155645 hsa-miR-7847-3p 1 0 0
chr12:120155283|120155645 hsa-miR-6840-5p 1 0 0
chr12:120155283|120155645 hsa-miR-1915-5p 1 0 0
chr12:120155283|120155645 hsa-miR-3180-3p 1 0 0
chr12:120155283|120155645 hsa-miR-6732-5p 1 0 0
chr12:120155283|120155645 hsa-miR-2467-5p 1 0 0
chr12:120155283|120155645 hsa-miR-3150b-3p 1 0 0
chr12:120155283|120155645 hsa-miR-6740-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6823-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6886-5p 1 0 0
chr12:120155283|120155645 hsa-miR-7112-5p 1 0 0
chr12:120155283|120155645 hsa-miR-1233-5p 1 0 0
chr12:120155283|120155645 hsa-miR-1273h-5p 1 0 0
chr12:120155283|120155645 hsa-miR-4763-3p 1 0 0
chr12:120155283|120155645 hsa-miR-6778-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6787-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6870-5p 1 0 0
chr12:120155283|120155645 hsa-miR-3180 1 0 0
chr12:120155283|120155645 hsa-miR-5001-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6737-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6754-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6756-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6769a-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6819-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6851-5p 1 0 0
chr12:120155283|120155645 hsa-miR-11181-3p 1 0 0
chr12:120155283|120155645 hsa-miR-1249-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6779-5p 1 0 0
chr12:120155283|120155645 hsa-miR-7111-5p 1 0 0
chr12:120155283|120155645 hsa-miR-3620-5p 1 0 0
chr12:120155283|120155645 hsa-miR-1237-5p 1 0 0
chr12:120155283|120155645 hsa-miR-1909-3p 1 0 0
chr12:120155283|120155645 hsa-miR-449c-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6729-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6794-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6858-5p 1 0 0
chr12:120155283|120155645 hsa-miR-939-5p 1 0 0
chr12:120155283|120155645 hsa-miR-4758-5p 1 0 0
chr12:120155283|120155645 hsa-miR-6891-5p 1 0 0
chr12:120155283|120155645 hsa-miR-769-3p 1 0 0
chr12:120155283|120155645 hsa-miR-10392-3p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:120155283|120155645
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MPLVTCHCLGEGFGPCLPYSRLMIDHVVNQQGAEVWLQV
Nucleotide Sequence CTGCCGCTGGTAACGTGCCACTGCTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGCCGCCTCATGATAGATCACGTCGTCAATCAGCAAGGAGCAGAGGTCTGGCTGCAGGTCTAG
CircID chr12:120155283|120155645
ORF Type ORF2
Protein Length 64
Nucleotide Length 192
Protein Sequence MLRQRSAALALPAQPFFPLEAEHTGFSYFLKEERMQQEKATCWLSHLSASFRISSSLSNLTTQS
Nucleotide Sequence CTGCTTAGACAAAGATCTGCAGCACTTGCCCTGCCAGCCCAGCCCTTCTTCCCACTGGAGGCTGAGCACACTGGGTTCAGTTATTTCCTAAAGGAAGAGAGGATGCAGCAGGAGAAAGCGACATGCTGGCTCTCTCACCTCTCAGCCAGCTTCCGGATCTCCTCCTCCTTGTCAAACTTGACCACCCAGAGT
CircID chr12:120155283|120155645
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MWEIQGRGCLDKDLQHLPCQPSPSSHWRLSTLGSVIS
Nucleotide Sequence CTGTGGGAGATCCAAGGCAGGGGCTGCTTAGACAAAGATCTGCAGCACTTGCCCTGCCAGCCCAGCCCTTCTTCCCACTGGAGGCTGAGCACACTGGGTTCAGTTATTTCCTAA
CircID chr12:120155283|120155645
ORF Type ORF4
Protein Length 49
Nucleotide Length 150
Protein Sequence MLGRGLRPLPALQPPHDRSRRQSARSRGLAAGLGPSLTRACGRSKAGAA
Nucleotide Sequence CTGCTTGGGAGAGGGCTTCGGCCCCTGCCTGCCTTACAGCCGCCTCATGATAGATCACGTCGTCAATCAGCAAGGAGCAGAGGTCTGGCTGCAGGTCTAGGCCCATCATTGACCAGAGCCTGTGGGAGATCCAAGGCAGGGGCTGCTTAG
CircID chr12:120155283|120155645
ORF Type ORF5
Protein Length 71
Nucleotide Length 213
Protein Sequence MGWQGKCCRSLSKQPLPWISHRLWSMMGLDLQPDLCSLLIDDVIYHEAAVRQAGAEALSQAVARYQRQAAE
Nucleotide Sequence CTGGGCTGGCAGGGCAAGTGCTGCAGATCTTTGTCTAAGCAGCCCCTGCCTTGGATCTCCCACAGGCTCTGGTCAATGATGGGCCTAGACCTGCAGCCAGACCTCTGCTCCTTGCTGATTGACGACGTGATCTATCATGAGGCGGCTGTAAGGCAGGCAGGGGCCGAAGCCCTCTCCCAAGCAGTGGCACGTTACCAGCGGCAGGCGGCGGAG
CircID chr12:120155283|120155645
ORF Type ORF6
Protein Length 38
Nucleotide Length 117
Protein Sequence MNPVCSASSGKKGWAGRASAADLCLSSPCLGSPTGSGQ
Nucleotide Sequence CTGAACCCAGTGTGCTCAGCCTCCAGTGGGAAGAAGGGCTGGGCTGGCAGGGCAAGTGCTGCAGATCTTTGTCTAAGCAGCCCCTGCCTTGGATCTCCCACAGGCTCTGGTCAATGA
CircID chr12:120155283|120155645
ORF Type ORF7
Protein Length 32
Nucleotide Length 99
Protein Sequence MTRRRRSGSWLRGERASMSLSPAASSLPLGNN
Nucleotide Sequence TTGACAAGGAGGAGGAGATCCGGAAGCTGGCTGAGAGGTGAGAGAGCCAGCATGTCGCTTTCTCCTGCTGCATCCTCTCTTCCTTTAGGAAATAACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab