CircRNA Information

General Information
circRNA Basic Information
CircID chr12:120210772|120210918
Strand -
CircType exon
Host Gene ENSG00000089159.14;
Algorism CIRI2;
Sequence TGTCACCATTAGACCCCGGTGGGGCCCCTTTCTCCTCATCAGGAGCCCAAGGCCTGGCTCCTCTTTCATCCTTGGTAAAGAGCTCTGGGGGGTTTCCCCAGAGGAGCCTGTCCCTCTGCCCCAAATCCTATCATGCTCCCTTATGAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:120210772|120210918 hsa-miR-326 0 1 1
chr12:120210772|120210918 hsa-miR-484 0 0 1
chr12:120210772|120210918 hsa-miR-583 0 0 1
chr12:120210772|120210918 hsa-miR-635 0 0 1
chr12:120210772|120210918 hsa-miR-637 0 0 1
chr12:120210772|120210918 hsa-miR-296-5p 0 0 1
chr12:120210772|120210918 hsa-miR-486-3p 0 0 1
chr12:120210772|120210918 hsa-miR-361-3p 0 0 1
chr12:120210772|120210918 hsa-miR-330-5p 0 0 1
chr12:120210772|120210918 hsa-miR-1280 0 0 1
chr12:120210772|120210918 hsa-miR-658 0 1 0
chr12:120210772|120210918 hsa-miR-920 1 0 0
chr12:120210772|120210918 hsa-miR-2110 0 1 0
chr12:120210772|120210918 hsa-miR-3155a 0 1 0
chr12:120210772|120210918 hsa-miR-4300 1 0 0
chr12:120210772|120210918 hsa-miR-4253 1 0 0
chr12:120210772|120210918 hsa-miR-3714 1 0 0
chr12:120210772|120210918 hsa-miR-3155b 0 1 0
chr12:120210772|120210918 hsa-miR-4510 1 0 0
chr12:120210772|120210918 hsa-miR-4688 1 0 0
chr12:120210772|120210918 hsa-miR-4689 0 1 0
chr12:120210772|120210918 hsa-miR-4739 1 0 0
chr12:120210772|120210918 hsa-miR-4748 1 0 0
chr12:120210772|120210918 hsa-miR-6081 1 0 0
chr12:120210772|120210918 hsa-miR-6090 1 0 0
chr12:120210772|120210918 hsa-miR-6127 1 0 0
chr12:120210772|120210918 hsa-miR-6129 1 0 0
chr12:120210772|120210918 hsa-miR-6133 1 0 0
chr12:120210772|120210918 hsa-miR-8082 1 0 0
chr12:120210772|120210918 hsa-miR-12115 1 0 0
chr12:120210772|120210918 hsa-miR-12118 0 1 0
chr12:120210772|120210918 hsa-miR-6734-5p 1 0 0
chr12:120210772|120210918 hsa-miR-671-5p 1 0 0
chr12:120210772|120210918 hsa-miR-3150a-3p 0 1 0
chr12:120210772|120210918 hsa-miR-6894-5p 1 0 0
chr12:120210772|120210918 hsa-miR-4695-5p 1 0 0
chr12:120210772|120210918 hsa-miR-505-5p 0 1 0
chr12:120210772|120210918 hsa-miR-4655-5p 0 1 0
chr12:120210772|120210918 hsa-miR-433-3p 1 0 0
chr12:120210772|120210918 hsa-miR-7845-5p 0 1 0
chr12:120210772|120210918 hsa-miR-491-5p 0 1 0
chr12:120210772|120210918 hsa-miR-3151-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6829-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6805-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6827-5p 1 0 0
chr12:120210772|120210918 hsa-miR-23a-5p 1 1 0
chr12:120210772|120210918 hsa-miR-6798-5p 1 0 0
chr12:120210772|120210918 hsa-miR-3126-5p 0 1 0
chr12:120210772|120210918 hsa-miR-6760-5p 1 0 0
chr12:120210772|120210918 hsa-miR-2467-3p 0 1 0
chr12:120210772|120210918 hsa-miR-6834-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6824-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6789-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6892-5p 0 1 0
chr12:120210772|120210918 hsa-miR-3189-3p 1 1 0
chr12:120210772|120210918 hsa-miR-181d-3p 0 1 0
chr12:120210772|120210918 hsa-miR-6816-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6865-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6775-5p 1 0 0
chr12:120210772|120210918 hsa-miR-1343-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6726-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6743-5p 1 0 0
chr12:120210772|120210918 hsa-miR-1249-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6774-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6875-5p 1 0 0
chr12:120210772|120210918 hsa-miR-3620-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6862-5p 1 0 0
chr12:120210772|120210918 hsa-miR-10526-3p 1 0 0
chr12:120210772|120210918 hsa-miR-4632-5p 1 0 0
chr12:120210772|120210918 hsa-miR-4685-5p 1 0 0
chr12:120210772|120210918 hsa-miR-4745-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6735-5p 1 1 0
chr12:120210772|120210918 hsa-miR-675-5p 1 0 0
chr12:120210772|120210918 hsa-miR-6858-5p 0 1 0
chr12:120210772|120210918 hsa-miR-6883-5p 1 0 0
chr12:120210772|120210918 hsa-miR-939-5p 1 1 0
chr12:120210772|120210918 hsa-miR-10398-3p 1 0 0
chr12:120210772|120210918 hsa-miR-6750-5p 1 0 0
chr12:120210772|120210918 hsa-miR-5591-5p 1 0 0
chr12:120210772|120210918 hsa-miR-10400-3p 1 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:120210772|120210918
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MAPLSSLVKSSGGFPQRSLSLCPKSYHAPL
Nucleotide Sequence CTGGCTCCTCTTTCATCCTTGGTAAAGAGCTCTGGGGGGTTTCCCCAGAGGAGCCTGTCCCTCTGCCCCAAATCCTATCATGCTCCCTTATGA
CircID chr12:120210772|120210918
ORF Type ORF2
Protein Length 41
Nucleotide Length 123
Protein Sequence MGQRDRLLWGNPPELFTKDERGARPWAPDEEKGAPPGSNGD
Nucleotide Sequence TTGGGGCAGAGGGACAGGCTCCTCTGGGGAAACCCCCCAGAGCTCTTTACCAAGGATGAAAGAGGAGCCAGGCCTTGGGCTCCTGATGAGGAGAAAGGGGCCCCACCGGGGTCTAATGGTGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab