CircRNA Information

General Information
circRNA Basic Information
CircID chr12:120700754|120700946
Strand +
CircType exon
Host Gene ENSG00000110917.6;
Algorism CIRI2;
Sequence CCAGCTAGTCCCCAAATCACCTGCTCTTATCAAGATAATCTGGCCCCCCATAGCAGGCTAGACAAAAGGCAGCTGGAAAGGACAGGCCAGACTGGAAGCAAGCCACACAGATGCAAAGAAGAAACCTGCCCTCGCTAGGCAGCTGATCTACTGGTACCAATCTAGTCTCATAACAAAATGAGGAAATCTAGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:120700754|120700946 hsa-miR-22-5p 0 0 1
chr12:120700754|120700946 hsa-miR-22-3p 0 0 1
chr12:120700754|120700946 hsa-miR-596 0 0 1
chr12:120700754|120700946 hsa-miR-622 0 0 1
chr12:120700754|120700946 hsa-miR-657 0 0 1
chr12:120700754|120700946 hsa-miR-936 0 0 1
chr12:120700754|120700946 hsa-miR-1238-5p 0 0 1
chr12:120700754|120700946 hsa-miR-1238-3p 0 0 1
chr12:120700754|120700946 hsa-miR-1263 0 0 1
chr12:120700754|120700946 hsa-miR-125a-3p 0 1 1
chr12:120700754|120700946 hsa-miR-145-5p 0 0 1
chr12:120700754|120700946 hsa-miR-28-3p 0 0 1
chr12:120700754|120700946 hsa-miR-509-3p 0 1 1
chr12:120700754|120700946 hsa-miR-1207-3p 0 0 1
chr12:120700754|120700946 hsa-miR-516a-3p 0 0 1
chr12:120700754|120700946 hsa-miR-644 0 0 1
chr12:120700754|120700946 hsa-miR-147 0 0 1
chr12:120700754|120700946 hsa-miR-147a 0 1 0
chr12:120700754|120700946 hsa-miR-557 1 0 0
chr12:120700754|120700946 hsa-miR-644a 0 1 0
chr12:120700754|120700946 hsa-miR-1202 1 0 0
chr12:120700754|120700946 hsa-miR-2278 0 1 0
chr12:120700754|120700946 hsa-miR-3665 1 0 0
chr12:120700754|120700946 hsa-miR-4736 1 1 0
chr12:120700754|120700946 hsa-miR-4741 1 0 0
chr12:120700754|120700946 hsa-miR-6165 1 0 0
chr12:120700754|120700946 hsa-miR-8062 0 1 0
chr12:120700754|120700946 hsa-miR-214-5p 0 1 0
chr12:120700754|120700946 hsa-miR-129-5p 1 0 0
chr12:120700754|120700946 hsa-miR-1227-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6089 1 0 0
chr12:120700754|120700946 hsa-miR-6890-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6721-5p 1 0 0
chr12:120700754|120700946 hsa-miR-185-3p 1 0 0
chr12:120700754|120700946 hsa-miR-6882-3p 1 1 0
chr12:120700754|120700946 hsa-miR-1226-5p 1 0 0
chr12:120700754|120700946 hsa-miR-4640-5p 1 0 0
chr12:120700754|120700946 hsa-miR-1228-5p 1 0 0
chr12:120700754|120700946 hsa-miR-3616-3p 0 1 0
chr12:120700754|120700946 hsa-miR-7112-5p 1 0 0
chr12:120700754|120700946 hsa-miR-2115-5p 0 1 0
chr12:120700754|120700946 hsa-miR-4652-5p 0 1 0
chr12:120700754|120700946 hsa-miR-2277-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6748-3p 0 1 0
chr12:120700754|120700946 hsa-miR-19b-1-5p 1 0 0
chr12:120700754|120700946 hsa-miR-1233-5p 1 0 0
chr12:120700754|120700946 hsa-miR-4763-3p 1 0 0
chr12:120700754|120700946 hsa-miR-6778-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6743-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6803-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6751-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6879-5p 1 0 0
chr12:120700754|120700946 hsa-miR-1237-5p 1 0 0
chr12:120700754|120700946 hsa-miR-328-5p 1 1 0
chr12:120700754|120700946 hsa-miR-4632-5p 1 1 0
chr12:120700754|120700946 hsa-miR-4649-5p 1 0 0
chr12:120700754|120700946 hsa-miR-4726-5p 0 1 0
chr12:120700754|120700946 hsa-miR-4749-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6729-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6795-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6846-5p 1 1 0
chr12:120700754|120700946 hsa-miR-6848-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6887-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6845-5p 1 1 0
chr12:120700754|120700946 hsa-miR-7843-5p 1 0 0
chr12:120700754|120700946 hsa-miR-6753-3p 1 0 0
chr12:120700754|120700946 hsa-miR-7107-3p 1 1 0
chr12:120700754|120700946 hsa-miR-6762-5p 1 0 0
chr12:120700754|120700946 hsa-miR-5699-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:120700754|120700946
ORF Type ORF1
Protein Length 32
Nucleotide Length 99
Protein Sequence MAPHSRLDKRQLERTGQTGSKPHRCKEETCPR
Nucleotide Sequence CTGGCCCCCCATAGCAGGCTAGACAAAAGGCAGCTGGAAAGGACAGGCCAGACTGGAAGCAAGCCACACAGATGCAAAGAAGAAACCTGCCCTCGCTAG

CircID chr12:120700754|120700946
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MEASHTDAKKKPALARQLIYWYQSSLITK
Nucleotide Sequence CTGGAAGCAAGCCACACAGATGCAAAGAAGAAACCTGCCCTCGCTAGGCAGCTGATCTACTGGTACCAATCTAGTCTCATAACAAAATGA

CircID chr12:120700754|120700946
ORF Type ORF3
Protein Length 47
Nucleotide Length 144
Protein Sequence MVPVDQLPSEGRFLLCICVACFQSGLSFPAAFCLACYGGPDYLDKSR
Nucleotide Sequence TTGGTACCAGTAGATCAGCTGCCTAGCGAGGGCAGGTTTCTTCTTTGCATCTGTGTGGCTTGCTTCCAGTCTGGCCTGTCCTTTCCAGCTGCCTTTTGTCTAGCCTGCTATGGGGGGCCAGATTATCTTGATAAGAGCAGGTGA

CircID chr12:120700754|120700946
ORF Type ORF4
Protein Length 28
Nucleotide Length 87
Protein Sequence MHLCGLLPVWPVLSSCLLSSLLWGARLS
Nucleotide Sequence TTGCATCTGTGTGGCTTGCTTCCAGTCTGGCCTGTCCTTTCCAGCTGCCTTTTGTCTAGCCTGCTATGGGGGGCCAGATTATCTTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites