CircRNA Information

General Information
circRNA Basic Information
CircID chr12:121509636|121509823
Strand +
CircType exon
Host Gene ENSG00000089094.15;
Algorism CIRI2;
Sequence CTGCCCTGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATTGGCCGTAGACTACCCCAAGACCCCCACCGGCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGGCCTGAAAGCTCTGGTGGAGAAACTGGAATCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:121509636|121509823 hsa-miR-96-5p 0 0 1
chr12:121509636|121509823 hsa-miR-96-3p 0 0 1
chr12:121509636|121509823 hsa-miR-182-5p 0 0 1
chr12:121509636|121509823 hsa-miR-182-3p 0 0 1
chr12:121509636|121509823 hsa-miR-143-5p 0 0 1
chr12:121509636|121509823 hsa-miR-143-3p 0 0 1
chr12:121509636|121509823 hsa-miR-377-5p 0 0 1
chr12:121509636|121509823 hsa-miR-377-3p 0 0 1
chr12:121509636|121509823 hsa-miR-635 0 0 1
chr12:121509636|121509823 hsa-miR-1271-5p 0 0 1
chr12:121509636|121509823 hsa-miR-1271-3p 0 0 1
chr12:121509636|121509823 hsa-miR-1238-5p 0 0 1
chr12:121509636|121509823 hsa-miR-1238-3p 0 0 1
chr12:121509636|121509823 hsa-miR-1304-5p 0 0 1
chr12:121509636|121509823 hsa-miR-1304-3p 0 0 1
chr12:121509636|121509823 hsa-miR-769-5p 1 1 1
chr12:121509636|121509823 hsa-miR-145-5p 0 1 1
chr12:121509636|121509823 hsa-miR-1224-5p 0 0 1
chr12:121509636|121509823 hsa-miR-193a-5p 0 0 1
chr12:121509636|121509823 hsa-miR-515-5p 0 0 1
chr12:121509636|121509823 hsa-miR-663 0 0 1
chr12:121509636|121509823 hsa-miR-608 1 0 0
chr12:121509636|121509823 hsa-miR-663a 1 0 0
chr12:121509636|121509823 hsa-miR-1182 1 0 0
chr12:121509636|121509823 hsa-miR-3155a 0 1 0
chr12:121509636|121509823 hsa-miR-5090 1 0 0
chr12:121509636|121509823 hsa-miR-5787 1 0 0
chr12:121509636|121509823 hsa-miR-6077 1 0 0
chr12:121509636|121509823 hsa-miR-6088 1 0 0
chr12:121509636|121509823 hsa-miR-92a-2-5p 0 1 0
chr12:121509636|121509823 hsa-miR-1273h-3p 1 0 0
chr12:121509636|121509823 hsa-miR-6765-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6746-5p 1 1 0
chr12:121509636|121509823 hsa-miR-6820-5p 1 0 0
chr12:121509636|121509823 hsa-miR-197-5p 1 0 0
chr12:121509636|121509823 hsa-miR-7108-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6827-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6786-5p 0 1 0
chr12:121509636|121509823 hsa-miR-1908-5p 1 0 0
chr12:121509636|121509823 hsa-miR-4787-5p 1 0 0
chr12:121509636|121509823 hsa-miR-149-3p 1 0 0
chr12:121509636|121509823 hsa-miR-208a-5p 1 0 0
chr12:121509636|121509823 hsa-miR-3124-3p 0 1 0
chr12:121509636|121509823 hsa-miR-1207-5p 1 0 0
chr12:121509636|121509823 hsa-miR-1233-5p 1 0 0
chr12:121509636|121509823 hsa-miR-4763-3p 1 0 0
chr12:121509636|121509823 hsa-miR-6787-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6870-5p 1 0 0
chr12:121509636|121509823 hsa-miR-1343-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6737-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6756-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6803-5p 1 1 0
chr12:121509636|121509823 hsa-miR-6819-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6842-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6751-5p 1 1 0
chr12:121509636|121509823 hsa-miR-6808-5p 1 0 0
chr12:121509636|121509823 hsa-miR-10396b-5p 1 0 0
chr12:121509636|121509823 hsa-miR-6858-5p 1 0 0
chr12:121509636|121509823 hsa-miR-939-5p 1 1 0
chr12:121509636|121509823 hsa-miR-6731-5p 1 1 0
chr12:121509636|121509823 hsa-miR-6785-5p 1 0 0
chr12:121509636|121509823 hsa-miR-5195-3p 0 1 0
chr12:121509636|121509823 hsa-miR-579-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:121509636|121509823
ORF Type ORF1
Protein Length 61
Nucleotide Length 183
Protein Sequence MRFLKRTLSNESEESVKSTTLAVDYPKTPTGSPATEVSAKWTHLTEFELKGLKALVEKLES
Nucleotide Sequence CTGCGATTCCTCAAAAGGACTTTGTCTAATGAGTCGGAGGAAAGTGTGAAGTCCACCACATTGGCCGTAGACTACCCCAAGACCCCCACCGGCTCTCCCGCCACGGAGGTCTCTGCCAAATGGACCCATCTCACTGAGTTTGAACTGAAGGGCCTGAAAGCTCTGGTGGAGAAACTGGAATCC

CircID chr12:121509636|121509823
ORF Type ORF2
Protein Length 44
Nucleotide Length 132
Protein Sequence MGPFGRDLRGGRAGGGLGVVYGQCGGLHTFLRLIRQSPFEESQG
Nucleotide Sequence ATGGGTCCATTTGGCAGAGACCTCCGTGGCGGGAGAGCCGGTGGGGGTCTTGGGGTAGTCTACGGCCAATGTGGTGGACTTCACACTTTCCTCCGACTCATTAGACAAAGTCCTTTTGAGGAATCGCAGGGC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites