CircRNA Information

General Information
circRNA Basic Information
CircID chr12:121779397|121779641
Strand -
CircType exon
Host Gene ENSG00000188735.11;
Algorism CIRI2;
Sequence ACCATGAGCTGGAGGGTCGGGATGGGGCAGCCTCCCTGGTGCAATCGGCACCTGGGCCCCCGGGCCCTGTCAGTGCTGTCGTGAGGTCTGTCTGCCCTGGGTCAGAGCAGCAGGCAGAGCCGGCGCTTCTTCTGCCGTTGCGCCTTCTTCAGAGCGCTGAGAGCCACCTTGGCGGCCTCCCGGAAGACGTCCTCCACATTCTCCCGAAACTTGGCGGAACATTCCAGGTAGAGAGCAGCTCGGAT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:121779397|121779641 hsa-miR-25-5p 0 0 1
chr12:121779397|121779641 hsa-miR-25-3p 0 0 1
chr12:121779397|121779641 hsa-miR-32-5p 0 0 1
chr12:121779397|121779641 hsa-miR-32-3p 0 0 1
chr12:121779397|121779641 hsa-miR-206 -7 0 1
chr12:121779397|121779641 hsa-miR-363-5p 0 0 1
chr12:121779397|121779641 hsa-miR-363-3p 0 0 1
chr12:121779397|121779641 hsa-miR-367-5p 0 0 1
chr12:121779397|121779641 hsa-miR-367-3p 0 0 1
chr12:121779397|121779641 hsa-miR-370-5p 0 0 1
chr12:121779397|121779641 hsa-miR-370-3p 0 0 1
chr12:121779397|121779641 hsa-miR-92b-5p 0 0 1
chr12:121779397|121779641 hsa-miR-92b-3p 0 0 1
chr12:121779397|121779641 hsa-miR-558 -5 0 1
chr12:121779397|121779641 hsa-miR-613 -7 1 1
chr12:121779397|121779641 hsa-miR-619-5p 0 0 1
chr12:121779397|121779641 hsa-miR-619-3p 0 0 1
chr12:121779397|121779641 hsa-miR-766-5p 0 0 1
chr12:121779397|121779641 hsa-miR-766-3p 0 0 1
chr12:121779397|121779641 hsa-miR-765 -4 0 1
chr12:121779397|121779641 hsa-miR-298 -13 1 1
chr12:121779397|121779641 hsa-miR-760 -11 0 1
chr12:121779397|121779641 hsa-miR-1321 0 0 1
chr12:121779397|121779641 hsa-miR-1324 -4 1 1
chr12:121779397|121779641 hsa-miR-615-3p -6 0 1
chr12:121779397|121779641 hsa-miR-767-5p -3 0 1
chr12:121779397|121779641 hsa-miR-485-5p -5 0 1
chr12:121779397|121779641 hsa-miR-324-3p 0 0 1
chr12:121779397|121779641 hsa-miR-524-3p -3 0 1
chr12:121779397|121779641 hsa-miR-525-3p -4 0 1
chr12:121779397|121779641 hsa-miR-1 0 0 1
chr12:121779397|121779641 hsa-miR-92a 0 0 1
chr12:121779397|121779641 hsa-miR-764 -12 1 0
chr12:121779397|121779641 hsa-miR-1538 -15 1 0
chr12:121779397|121779641 hsa-miR-1913 -11 1 0
chr12:121779397|121779641 hsa-miR-3166 -7 1 0
chr12:121779397|121779641 hsa-miR-3185 -21 1 0
chr12:121779397|121779641 hsa-miR-3197 -12 1 0
chr12:121779397|121779641 hsa-miR-4497 -9 1 0
chr12:121779397|121779641 hsa-miR-4526 -9 1 0
chr12:121779397|121779641 hsa-miR-4657 -10 1 0
chr12:121779397|121779641 hsa-miR-5691 -4 1 0
chr12:121779397|121779641 hsa-miR-7706 -16 1 0
chr12:121779397|121779641 hsa-miR-3194-3p -10 1 0
chr12:121779397|121779641 hsa-miR-4726-3p -11 1 0
chr12:121779397|121779641 hsa-miR-6089 -22 1 0
chr12:121779397|121779641 hsa-miR-7847-3p -20 1 0
chr12:121779397|121779641 hsa-miR-6746-5p -22 1 0
chr12:121779397|121779641 hsa-miR-7154-3p -7 1 0
chr12:121779397|121779641 hsa-miR-3189-5p -12 1 0
chr12:121779397|121779641 hsa-miR-6728-3p -14 1 0
chr12:121779397|121779641 hsa-miR-6882-3p -15 1 0
chr12:121779397|121779641 hsa-miR-6894-3p -5 1 0
chr12:121779397|121779641 hsa-miR-6753-5p -21 1 0
chr12:121779397|121779641 hsa-miR-5001-3p -12 1 0
chr12:121779397|121779641 hsa-miR-6771-5p -14 1 0
chr12:121779397|121779641 hsa-miR-378a-5p -15 1 0
chr12:121779397|121779641 hsa-miR-383-3p -3 1 0
chr12:121779397|121779641 hsa-miR-7113-5p -8 1 0
chr12:121779397|121779641 hsa-miR-6738-3p -12 1 0
chr12:121779397|121779641 hsa-miR-4750-3p -13 1 0
chr12:121779397|121779641 hsa-miR-888-3p 0 1 0
chr12:121779397|121779641 hsa-miR-196b-3p -11 1 0
chr12:121779397|121779641 hsa-miR-6754-5p -13 1 0
chr12:121779397|121779641 hsa-miR-1915-3p -16 1 0
chr12:121779397|121779641 hsa-miR-6836-5p -12 1 0
chr12:121779397|121779641 hsa-miR-4632-5p -10 1 0
chr12:121779397|121779641 hsa-miR-4685-5p -14 1 0
chr12:121779397|121779641 hsa-miR-6735-5p -10 1 0
chr12:121779397|121779641 hsa-miR-4436b-3p -5 1 0
chr12:121779397|121779641 hsa-miR-7843-5p -9 1 0
chr12:121779397|121779641 hsa-miR-6893-3p -6 1 0
chr12:121779397|121779641 hsa-miR-6837-5p -10 1 0
chr12:121779397|121779641 hsa-miR-4756-5p -16 1 0
chr12:121779397|121779641 hsa-miR-6764-5p -10 1 0
chr12:121779397|121779641 hsa-miR-4653-5p -7 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:121779397|121779641
ORF Type ORF1
Protein Length 26
Nucleotide Length 81
Protein Sequence MSWRVGMGQPPWCNRHLGPRALSVLS
Nucleotide Sequence ATGAGCTGGAGGGTCGGGATGGGGCAGCCTCCCTGGTGCAATCGGCACCTGGGCCCCCGGGCCCTGTCAGTGCTGTCGTGA

CircID chr12:121779397|121779641
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MSALGQSSRQSRRFFCRCAFFRALRATLAASRKTSSTFSRNLAEHSR
Nucleotide Sequence CTGTCTGCCCTGGGTCAGAGCAGCAGGCAGAGCCGGCGCTTCTTCTGCCGTTGCGCCTTCTTCAGAGCGCTGAGAGCCACCTTGGCGGCCTCCCGGAAGACGTCCTCCACATTCTCCCGAAACTTGGCGGAACATTCCAGGTAG

CircID chr12:121779397|121779641
ORF Type ORF3
Protein Length 79
Nucleotide Length 237
Protein Sequence MEGRDGAASLVQSAPGPPGPVSAVVRSVCPGSEQQAEPALLLPLRLLQSAESHLGGLPEDVLHILPKLGGTFQVESSSD
Nucleotide Sequence CTGGAGGGTCGGGATGGGGCAGCCTCCCTGGTGCAATCGGCACCTGGGCCCCCGGGCCCTGTCAGTGCTGTCGTGAGGTCTGTCTGCCCTGGGTCAGAGCAGCAGGCAGAGCCGGCGCTTCTTCTGCCGTTGCGCCTTCTTCAGAGCGCTGAGAGCCACCTTGGCGGCCTCCCGGAAGACGTCCTCCACATTCTCCCGAAACTTGGCGGAACATTCCAGGTAGAGAGCAGCTCGGAT

CircID chr12:121779397|121779641
ORF Type ORF4
Protein Length 41
Nucleotide Length 126
Protein Sequence MECSAKFRENVEDVFREAAKVALSALKKAQRQKKRRLCLLL
Nucleotide Sequence CTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAGCGCTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGA

CircID chr12:121779397|121779641
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MLSTWNVPPSFGRMWRTSSGRPPRWLSAL
Nucleotide Sequence CTGCTCTCTACCTGGAATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAGCGCTCTGA

CircID chr12:121779397|121779641
ORF Type ORF6
Protein Length 50
Nucleotide Length 153
Protein Sequence MFRQVSGECGGRLPGGRQGGSQRSEEGATAEEAPALPAALTQGRQTSRQH
Nucleotide Sequence ATGTTCCGCCAAGTTTCGGGAGAATGTGGAGGACGTCTTCCGGGAGGCCGCCAAGGTGGCTCTCAGCGCTCTGAAGAAGGCGCAACGGCAGAAGAAGCGCCGGCTCTGCCTGCTGCTCTGACCCAGGGCAGACAGACCTCACGACAGCACTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites