CircRNA Information

General Information
circRNA Basic Information
CircID chr12:122145816|122146053
Strand -
CircType exon
Host Gene ENSG00000175727.12;
Algorism CIRI2;
Sequence CTTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGGGAAGGCTTGGAGGGCCCGTCTCATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCTTGTCGCCTGGCCGCTGCCTCGCCCGCCTGAGGCCTCCTAGCAGGCAGCCTGGGTGTGAGTTGAGCCTCTCTCTTTTCCCTCTGGTGGGAAAGTGGCCTTTCCCTCAACACCTGCTCCCCGGCCCCAGAGGAACCCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:122145816|122146053 hsa-miR-326 0 0 1
chr12:122145816|122146053 hsa-miR-555 0 0 1
chr12:122145816|122146053 hsa-miR-637 1 0 1
chr12:122145816|122146053 hsa-miR-662 0 1 1
chr12:122145816|122146053 hsa-miR-939-5p 0 0 1
chr12:122145816|122146053 hsa-miR-939-3p 0 0 1
chr12:122145816|122146053 hsa-miR-1228-5p 0 0 1
chr12:122145816|122146053 hsa-miR-1228-3p 0 0 1
chr12:122145816|122146053 hsa-miR-1276 0 0 1
chr12:122145816|122146053 hsa-miR-1827 0 0 1
chr12:122145816|122146053 hsa-miR-139-3p 0 0 1
chr12:122145816|122146053 hsa-miR-885-3p 1 1 1
chr12:122145816|122146053 hsa-miR-330-3p 0 0 1
chr12:122145816|122146053 hsa-miR-1224-3p 0 0 1
chr12:122145816|122146053 hsa-miR-483-5p 0 0 1
chr12:122145816|122146053 hsa-miR-188-3p 0 0 1
chr12:122145816|122146053 hsa-miR-330-5p 0 1 1
chr12:122145816|122146053 hsa-miR-342-3p 0 0 1
chr12:122145816|122146053 hsa-miR-1260 0 0 1
chr12:122145816|122146053 hsa-miR-1280 0 0 1
chr12:122145816|122146053 hsa-miR-1273 0 0 1
chr12:122145816|122146053 hsa-miR-220a 0 0 1
chr12:122145816|122146053 hsa-miR-575 1 0 0
chr12:122145816|122146053 hsa-miR-608 1 0 0
chr12:122145816|122146053 hsa-miR-638 1 0 0
chr12:122145816|122146053 hsa-miR-650 1 0 0
chr12:122145816|122146053 hsa-miR-663a 1 0 0
chr12:122145816|122146053 hsa-miR-1471 1 1 0
chr12:122145816|122146053 hsa-miR-3132 1 0 0
chr12:122145816|122146053 hsa-miR-3141 1 0 0
chr12:122145816|122146053 hsa-miR-1273c 0 1 0
chr12:122145816|122146053 hsa-miR-3153 0 1 0
chr12:122145816|122146053 hsa-miR-4266 0 1 0
chr12:122145816|122146053 hsa-miR-4290 0 1 0
chr12:122145816|122146053 hsa-miR-3937 1 1 0
chr12:122145816|122146053 hsa-miR-1268b 1 0 0
chr12:122145816|122146053 hsa-miR-4467 1 0 0
chr12:122145816|122146053 hsa-miR-4487 0 1 0
chr12:122145816|122146053 hsa-miR-4488 1 0 0
chr12:122145816|122146053 hsa-miR-4498 0 1 0
chr12:122145816|122146053 hsa-miR-4507 1 0 0
chr12:122145816|122146053 hsa-miR-3960 1 0 0
chr12:122145816|122146053 hsa-miR-4651 1 0 0
chr12:122145816|122146053 hsa-miR-4656 1 0 0
chr12:122145816|122146053 hsa-miR-4688 1 1 0
chr12:122145816|122146053 hsa-miR-4706 1 0 0
chr12:122145816|122146053 hsa-miR-4721 1 0 0
chr12:122145816|122146053 hsa-miR-4739 1 0 0
chr12:122145816|122146053 hsa-miR-4767 0 1 0
chr12:122145816|122146053 hsa-miR-5090 1 0 0
chr12:122145816|122146053 hsa-miR-5787 1 0 0
chr12:122145816|122146053 hsa-miR-6081 0 1 0
chr12:122145816|122146053 hsa-miR-6085 1 0 0
chr12:122145816|122146053 hsa-miR-6090 1 0 0
chr12:122145816|122146053 hsa-miR-6124 0 1 0
chr12:122145816|122146053 hsa-miR-8075 1 0 0
chr12:122145816|122146053 hsa-miR-8089 1 1 0
chr12:122145816|122146053 hsa-miR-128-1-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6734-5p 1 0 0
chr12:122145816|122146053 hsa-miR-500b-3p 0 1 0
chr12:122145816|122146053 hsa-miR-6765-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6510-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6804-5p 1 0 0
chr12:122145816|122146053 hsa-miR-3934-5p 0 1 0
chr12:122145816|122146053 hsa-miR-1227-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6089 1 0 0
chr12:122145816|122146053 hsa-miR-6807-5p 1 0 0
chr12:122145816|122146053 hsa-miR-3192-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6873-5p 1 1 0
chr12:122145816|122146053 hsa-miR-4695-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6746-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4755-3p 1 1 0
chr12:122145816|122146053 hsa-miR-6820-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6727-5p 1 0 0
chr12:122145816|122146053 hsa-miR-7845-5p 1 1 0
chr12:122145816|122146053 hsa-miR-7108-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6716-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6793-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6732-5p 1 0 0
chr12:122145816|122146053 hsa-miR-2467-5p 0 1 0
chr12:122145816|122146053 hsa-miR-23a-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6798-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6760-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6881-5p 1 1 0
chr12:122145816|122146053 hsa-miR-5008-5p 1 0 0
chr12:122145816|122146053 hsa-miR-5006-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4713-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1226-5p 1 1 0
chr12:122145816|122146053 hsa-miR-1229-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4640-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6771-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4787-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6830-5p 0 1 0
chr12:122145816|122146053 hsa-miR-937-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6789-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6781-5p 0 1 0
chr12:122145816|122146053 hsa-miR-5584-5p 0 1 0
chr12:122145816|122146053 hsa-miR-4776-5p 0 1 0
chr12:122145816|122146053 hsa-miR-6895-5p 1 0 0
chr12:122145816|122146053 hsa-miR-744-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6801-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6768-3p 0 1 0
chr12:122145816|122146053 hsa-miR-6750-3p 0 1 0
chr12:122145816|122146053 hsa-miR-10400-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1233-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4763-3p 1 0 0
chr12:122145816|122146053 hsa-miR-6778-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6870-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6775-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1343-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6743-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6752-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6756-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6803-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6813-5p 1 0 0
chr12:122145816|122146053 hsa-miR-7107-5p 1 0 0
chr12:122145816|122146053 hsa-miR-7110-5p 1 1 0
chr12:122145816|122146053 hsa-miR-1249-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6722-3p 1 0 0
chr12:122145816|122146053 hsa-miR-6797-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6808-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6875-5p 1 0 0
chr12:122145816|122146053 hsa-miR-5196-5p 1 0 0
chr12:122145816|122146053 hsa-miR-10396b-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1237-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1909-3p 1 0 0
chr12:122145816|122146053 hsa-miR-328-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4632-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4649-5p 1 1 0
chr12:122145816|122146053 hsa-miR-4685-5p 1 0 0
chr12:122145816|122146053 hsa-miR-4726-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6729-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6777-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6795-5p 1 1 0
chr12:122145816|122146053 hsa-miR-6846-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6848-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6889-5p 0 1 0
chr12:122145816|122146053 hsa-miR-4697-5p 1 0 0
chr12:122145816|122146053 hsa-miR-10394-3p 1 0 0
chr12:122145816|122146053 hsa-miR-6511a-5p 1 0 0
chr12:122145816|122146053 hsa-miR-1271-3p 1 0 0
chr12:122145816|122146053 hsa-miR-6750-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6791-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6762-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6884-5p 1 0 0
chr12:122145816|122146053 hsa-miR-6764-5p 1 0 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:122145816|122146053
ORF Type ORF1
Protein Length 79
Nucleotide Length 237
Protein Sequence LLWSSSFPYPGSDVGRLGGPVSSPPFALSCPFPLSPGRCLARLRPPSRQPGCELSLSLFPLVGKWPFPQHLLPGPRGTH
Nucleotide Sequence TTGCTTTGGTCCAGCTCTTTTCCTTACCCTGGCTCTGACGTGGGAAGGCTTGGAGGGCCCGTCTCATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCTTGTCGCCTGGCCGCTGCCTCGCCCGCCTGAGGCCTCCTAGCAGGCAGCCTGGGTGTGAGTTGAGCCTCTCTCTTTTCCCTCTGGTGGGAAAGTGGCCTTTCCCTCAACACCTGCTCCCCGGCCCCAGAGGAACCCAC
CircID chr12:122145816|122146053
ORF Type ORF2
Protein Length 33
Nucleotide Length 102
Protein Sequence MALTWEGLEGPSHHPRSPSAVPFPCRLAAASPA
Nucleotide Sequence CTGGCTCTGACGTGGGAAGGCTTGGAGGGCCCGTCTCATCACCCCCGTTCGCCCTCAGCTGTCCCTTTCCCTTGTCGCCTGGCCGCTGCCTCGCCCGCCTGA
CircID chr12:122145816|122146053
ORF Type ORF3
Protein Length 46
Nucleotide Length 141
Protein Sequence MRERPLSHQREKREAQLTPRLPARRPQAGEAAARRQGKGTAEGERG
Nucleotide Sequence TTGAGGGAAAGGCCACTTTCCCACCAGAGGGAAAAGAGAGAGGCTCAACTCACACCCAGGCTGCCTGCTAGGAGGCCTCAGGCGGGCGAGGCAGCGGCCAGGCGACAAGGGAAAGGGACAGCTGAGGGCGAACGGGGGTGA
CircID chr12:122145816|122146053
ORF Type ORF4
Protein Length 39
Nucleotide Length 120
Protein Sequence MLGGLRRARQRPGDKGKGQLRANGGDETGPPSLPTSEPG
Nucleotide Sequence CTGCTAGGAGGCCTCAGGCGGGCGAGGCAGCGGCCAGGCGACAAGGGAAAGGGACAGCTGAGGGCGAACGGGGGTGATGAGACGGGCCCTCCAAGCCTTCCCACGTCAGAGCCAGGGTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab