CircNet

General Information

circRNA Basic Information

CircID	chr12:122549766\|122562699
Strand	+
CircType	exon
Host Gene	ENSG00000184445.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	ATGAAAAACCTCATGGTTTATTCATTACCTACAATGGAAATACTATATTCTTTGGAAGTATCTAGTGTTTCTTCTCTGGTCCAAACAGGAATTAGCACAGATACCATATACCTTTTAGAAGGAGTTTGCAAAAATGATCCAAAGATGATGAATTTGTGGTGAATTACTGCCTGAAAGCTCAGTGGATAACCTATGAAACCACTCAAGAGATGCTGAATTATGCCAAAACCAGGCTTTTGAAGAAAGAAGATAAAACTGCTCTCATTTATTCTGATGGCTTGAAAGAGGTGCTAAGAGCTCATGCAAAATTGACTACTTTTTATGGAGCATTTGGACCAGAAAAATTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:122549766\|122562699	hsa-miR-29b-1-5p	0	1	1
chr12:122549766\|122562699	hsa-miR-154-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:122549766\|122562699
ORF Type	ORF1
Protein Length	54
Nucleotide Length	162
Protein Sequence	MKNLMVYSLPTMEILYSLEVSSVSSLVQTGISTDTIYLLEGVCKNDPKMMNLW*
Nucleotide Sequence	ATGAAAAACCTCATGGTTTATTCATTACCTACAATGGAAATACTATATTCTTTGGAAGTATCTAGTGTTTCTTCTCTGGTCCAAACAGGAATTAGCACAGATACCATATACCTTTTAGAAGGAGTTTGCAAAAATGATCCAAAGATGATGAATTTGTGGTGA

CircID	chr12:122549766\|122562699
ORF Type	ORF2
Protein Length	46
Nucleotide Length	138
Protein Sequence	MLNYAKTRLLKKEDKTALIYSDGLKEVLRAHAKLTTFYGAFGPEKF
Nucleotide Sequence	ATGCTGAATTATGCCAAAACCAGGCTTTTGAAGAAAGAAGATAAAACTGCTCTCATTTATTCTGATGGCTTGAAAGAGGTGCTAAGAGCTCATGCAAAATTGACTACTTTTTATGGAGCATTTGGACCAGAAAAATTC

CircID	chr12:122549766\|122562699
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MVSVLIPVWTREETLDTSKEYSISIVGNE*
Nucleotide Sequence	ATGGTATCTGTGCTAATTCCTGTTTGGACCAGAGAAGAAACACTAGATACTTCCAAAGAATATAGTATTTCCATTGTAGGTAATGAATAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:122549766\|122562699	U2AF2	3	10	0
chr12:122549766\|122562699	MOV10	0	1	0
chr12:122549766\|122562699	ELAVL1	1	2	0
chr12:122549766\|122562699	DHX9	1	0	0
chr12:122549766\|122562699	FAM120A	0	0	2
chr12:122549766\|122562699	KHDRBS1	0	1	0
chr12:122549766\|122562699	PRPF8	0	1	2
chr12:122549766\|122562699	UPF1	1	1	0
chr12:122549766\|122562699	TNRC6A	0	1	0
chr12:122549766\|122562699	TIA1	0	2	0
chr12:122549766\|122562699	FUS	0	1	0
chr12:122549766\|122562699	DGCR8	1	0	0
chr12:122549766\|122562699	SRSF1	0	3	3
chr12:122549766\|122562699	NOP58	0	0	2
chr12:122549766\|122562699	U2AF1	0	1	0
chr12:122549766\|122562699	NOP56	3	1	0
chr12:122549766\|122562699	DDX54	2	0	6
chr12:122549766\|122562699	FIP1L1	1	0	0
chr12:122549766\|122562699	PTBP1	0	0	1
chr12:122549766\|122562699	HNRNPC	1	3	0
chr12:122549766\|122562699	TRA2A	0	0	2
chr12:122549766\|122562699	ZNF184	0	0	1
chr12:122549766\|122562699	WDR33	0	1	0
chr12:122549766\|122562699	ACIN1	0	0	1
chr12:122549766\|122562699	LIN28B	0	1	2
chr12:122549766\|122562699	FXR1	0	0	4
chr12:122549766\|122562699	IGF2BP1	2	0	3
chr12:122549766\|122562699	IGF2BP2	1	4	2
chr12:122549766\|122562699	TARDBP	1	0	0
chr12:122549766\|122562699	BUD13	0	0	1
chr12:122549766\|122562699	CSTF2T	0	2	3
chr12:122549766\|122562699	CSTF2	1	0	0
chr12:122549766\|122562699	RBM22	0	1	0
chr12:122549766\|122562699	TIAL1	0	2	0
chr12:122549766\|122562699	DKC1	1	0	0
chr12:122549766\|122562699	FBL	1	1	0
chr12:122549766\|122562699	EIF4A3	1	1	9
chr12:122549766\|122562699	AGO2	0	1	3

CircRNA Information