CircRNA Information

General Information
circRNA Basic Information
CircID chr12:123253756|123253920
Strand +
CircType exon
Host Gene ENSG00000130921.6;
Algorism CIRI2;
Sequence CACGCAGTTGCTGGTTTTGTTGGTTGCCTGGCCCCCTGGACCGTGTCCTTTCACAAACTGCTCTTCGAGTTCATTCTCATCCAAGGAAAGCAGTGCAGGGTAGTCCTTCTTGCCTGCCATCTGGACCGGAGTGACAGCTATTCCTGGGGATAACAACGTCAGCTT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:123253756|123253920 hsa-miR-31-5p 0 0 1
chr12:123253756|123253920 hsa-miR-31-3p 0 0 1
chr12:123253756|123253920 hsa-miR-198 0 1 1
chr12:123253756|123253920 hsa-miR-10a-5p 0 0 1
chr12:123253756|123253920 hsa-miR-10a-3p 0 0 1
chr12:123253756|123253920 hsa-miR-10b-5p 0 0 1
chr12:123253756|123253920 hsa-miR-10b-3p 0 0 1
chr12:123253756|123253920 hsa-miR-488-5p 0 0 1
chr12:123253756|123253920 hsa-miR-488-3p 0 0 1
chr12:123253756|123253920 hsa-miR-580-5p 0 0 1
chr12:123253756|123253920 hsa-miR-580-3p 0 0 1
chr12:123253756|123253920 hsa-miR-634 0 0 1
chr12:123253756|123253920 hsa-miR-758-5p 0 0 1
chr12:123253756|123253920 hsa-miR-758-3p 0 0 1
chr12:123253756|123253920 hsa-miR-668-5p 0 0 1
chr12:123253756|123253920 hsa-miR-668-3p 0 0 1
chr12:123253756|123253920 hsa-miR-1255a 0 0 1
chr12:123253756|123253920 hsa-miR-1197 0 1 1
chr12:123253756|123253920 hsa-miR-502-5p 0 0 1
chr12:123253756|123253920 hsa-miR-1207-5p 0 0 1
chr12:123253756|123253920 hsa-miR-483-3p 0 0 1
chr12:123253756|123253920 hsa-miR-1255b 0 0 1
chr12:123253756|123253920 hsa-miR-637 1 0 0
chr12:123253756|123253920 hsa-miR-663a 1 0 0
chr12:123253756|123253920 hsa-miR-2278 0 1 0
chr12:123253756|123253920 hsa-miR-4462 1 1 0
chr12:123253756|123253920 hsa-miR-4488 1 0 0
chr12:123253756|123253920 hsa-miR-4673 1 1 0
chr12:123253756|123253920 hsa-miR-5192 1 0 0
chr12:123253756|123253920 hsa-miR-6081 1 0 0
chr12:123253756|123253920 hsa-miR-7150 0 1 0
chr12:123253756|123253920 hsa-miR-8075 1 0 0
chr12:123253756|123253920 hsa-miR-8080 0 1 0
chr12:123253756|123253920 hsa-miR-1227-5p 1 0 0
chr12:123253756|123253920 hsa-miR-1288-3p 0 1 0
chr12:123253756|123253920 hsa-miR-3190-3p 0 1 0
chr12:123253756|123253920 hsa-miR-6798-5p 1 1 0
chr12:123253756|123253920 hsa-miR-4793-3p 0 1 0
chr12:123253756|123253920 hsa-miR-4640-5p 1 1 0
chr12:123253756|123253920 hsa-miR-652-5p 1 0 0
chr12:123253756|123253920 hsa-miR-3065-5p 0 1 0
chr12:123253756|123253920 hsa-miR-4742-5p 0 1 0
chr12:123253756|123253920 hsa-miR-6773-3p 0 1 0
chr12:123253756|123253920 hsa-miR-3173-5p 0 1 0
chr12:123253756|123253920 hsa-miR-7844-5p 0 1 0
chr12:123253756|123253920 hsa-miR-6812-5p 1 0 0
chr12:123253756|123253920 hsa-miR-6816-5p 1 0 0
chr12:123253756|123253920 hsa-miR-6865-5p 1 1 0
chr12:123253756|123253920 hsa-miR-1237-5p 1 0 0
chr12:123253756|123253920 hsa-miR-328-5p 1 0 0
chr12:123253756|123253920 hsa-miR-4726-5p 0 1 0
chr12:123253756|123253920 hsa-miR-6795-5p 1 0 0
chr12:123253756|123253920 hsa-miR-6848-5p 1 0 0
chr12:123253756|123253920 hsa-miR-4697-5p 1 0 0
chr12:123253756|123253920 hsa-miR-6845-5p 1 1 0
chr12:123253756|123253920 hsa-miR-6885-5p 1 0 0
chr12:123253756|123253920 hsa-miR-10398-3p 1 0 0
chr12:123253756|123253920 hsa-miR-6762-5p 1 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:123253756|123253920
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence MAPWTVSFHKLLFEFILIQGKQCRVVLLACHLDRSDSYSWG
Nucleotide Sequence CTGGCCCCCTGGACCGTGTCCTTTCACAAACTGCTCTTCGAGTTCATTCTCATCCAAGGAAAGCAGTGCAGGGTAGTCCTTCTTGCCTGCCATCTGGACCGGAGTGACAGCTATTCCTGGGGATAA

CircID chr12:123253756|123253920
ORF Type ORF2
Protein Length 31
Nucleotide Length 96
Protein Sequence MLVLLVAWPPGPCPFTNCSSSSFSSKESSAG
Nucleotide Sequence TTGCTGGTTTTGTTGGTTGCCTGGCCCCCTGGACCGTGTCCTTTCACAAACTGCTCTTCGAGTTCATTCTCATCCAAGGAAAGCAGTGCAGGGTAG

CircID chr12:123253756|123253920
ORF Type ORF3
Protein Length 36
Nucleotide Length 111
Protein Sequence MPGPLDRVLSQTALRVHSHPRKAVQGSPSCLPSGPE
Nucleotide Sequence TTGCCTGGCCCCCTGGACCGTGTCCTTTCACAAACTGCTCTTCGAGTTCATTCTCATCCAAGGAAAGCAGTGCAGGGTAGTCCTTCTTGCCTGCCATCTGGACCGGAGTGA

CircID chr12:123253756|123253920
ORF Type ORF4
Protein Length 54
Nucleotide Length 162
Protein Sequence MTLLSPGIAVTPVQMAGKKDYPALLSLDENELEEQFVKGHGPGGQATNKTSNCV
Nucleotide Sequence CTGACGTTGTTATCCCCAGGAATAGCTGTCACTCCGGTCCAGATGGCAGGCAAGAAGGACTACCCTGCACTGCTTTCCTTGGATGAGAATGAACTCGAAGAGCAGTTTGTGAAAGGACACGGTCCAGGGGGCCAGGCAACCAACAAAACCAGCAACTGCGTG

CircID chr12:123253756|123253920
ORF Type ORF5
Protein Length 28
Nucleotide Length 87
Protein Sequence MSLRSRWQARRTTLHCFPWMRMNSKSSL
Nucleotide Sequence CTGTCACTCCGGTCCAGATGGCAGGCAAGAAGGACTACCCTGCACTGCTTTCCTTGGATGAGAATGAACTCGAAGAGCAGTTTGTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites