CircRNA Information

General Information
circRNA Basic Information
CircID chr12:123465844|123466050
Strand +
CircType exon
Host Gene ENSG00000184209.14;
Algorism CIRI2;
Sequence AACTGGCAAGTTAATAGGTTTTCGAAAAGGCCGGTCCCGTCCCCCAAATCTCAGTTGCCCAGACTCCTTTTTTCCCCCAAGACCGCCTCCAAGTCGCCGAGGGATCCACCCTTTGAGAGTCCTTTCCAGCTCGTAGTCCACAAATATCTCATGCTGGTCAATAACCAGGCCATCAGCATCTCGGTAAGCTTTGATCACGGCACGCTC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:123465844|123466050 hsa-miR-432-5p 0 0 1
chr12:123465844|123466050 hsa-miR-432-3p 0 0 1
chr12:123465844|123466050 hsa-miR-612 1 0 1
chr12:123465844|123466050 hsa-miR-625-5p 0 0 1
chr12:123465844|123466050 hsa-miR-625-3p 0 0 1
chr12:123465844|123466050 hsa-miR-634 0 0 1
chr12:123465844|123466050 hsa-miR-635 0 0 1
chr12:123465844|123466050 hsa-miR-650 0 0 1
chr12:123465844|123466050 hsa-miR-890 0 0 1
chr12:123465844|123466050 hsa-miR-1202 0 0 1
chr12:123465844|123466050 hsa-miR-1275 1 1 1
chr12:123465844|123466050 hsa-miR-1307-5p 0 0 1
chr12:123465844|123466050 hsa-miR-1307-3p 0 0 1
chr12:123465844|123466050 hsa-miR-330-3p 0 0 1
chr12:123465844|123466050 hsa-miR-875-3p 0 0 1
chr12:123465844|123466050 hsa-miR-338-3p 0 1 1
chr12:123465844|123466050 hsa-miR-371-5p 0 0 1
chr12:123465844|123466050 hsa-miR-1285 0 0 1
chr12:123465844|123466050 hsa-miR-768-5p 0 0 1
chr12:123465844|123466050 hsa-miR-637 1 0 0
chr12:123465844|123466050 hsa-miR-762 1 0 0
chr12:123465844|123466050 hsa-miR-760 1 0 0
chr12:123465844|123466050 hsa-miR-1231 1 0 0
chr12:123465844|123466050 hsa-miR-1469 1 0 0
chr12:123465844|123466050 hsa-miR-2110 1 0 0
chr12:123465844|123466050 hsa-miR-3138 1 0 0
chr12:123465844|123466050 hsa-miR-3147 1 0 0
chr12:123465844|123466050 hsa-miR-3153 1 0 0
chr12:123465844|123466050 hsa-miR-3165 0 1 0
chr12:123465844|123466050 hsa-miR-3196 1 0 0
chr12:123465844|123466050 hsa-miR-4314 1 0 0
chr12:123465844|123466050 hsa-miR-4322 1 0 0
chr12:123465844|123466050 hsa-miR-4270 1 0 0
chr12:123465844|123466050 hsa-miR-4271 1 0 0
chr12:123465844|123466050 hsa-miR-3612 1 0 0
chr12:123465844|123466050 hsa-miR-3911 1 0 0
chr12:123465844|123466050 hsa-miR-4443 1 0 0
chr12:123465844|123466050 hsa-miR-4450 1 0 0
chr12:123465844|123466050 hsa-miR-4466 1 0 0
chr12:123465844|123466050 hsa-miR-4467 1 0 0
chr12:123465844|123466050 hsa-miR-4486 1 0 0
chr12:123465844|123466050 hsa-miR-4487 1 1 0
chr12:123465844|123466050 hsa-miR-4488 1 1 0
chr12:123465844|123466050 hsa-miR-4491 1 0 0
chr12:123465844|123466050 hsa-miR-4505 1 0 0
chr12:123465844|123466050 hsa-miR-4525 1 0 0
chr12:123465844|123466050 hsa-miR-378i 1 0 0
chr12:123465844|123466050 hsa-miR-4538 1 0 0
chr12:123465844|123466050 hsa-miR-3960 1 0 0
chr12:123465844|123466050 hsa-miR-3978 0 1 0
chr12:123465844|123466050 hsa-miR-4634 1 0 0
chr12:123465844|123466050 hsa-miR-4651 1 0 0
chr12:123465844|123466050 hsa-miR-4739 1 0 0
chr12:123465844|123466050 hsa-miR-4741 1 0 0
chr12:123465844|123466050 hsa-miR-5572 1 0 0
chr12:123465844|123466050 hsa-miR-5698 1 0 0
chr12:123465844|123466050 hsa-miR-6068 1 0 0
chr12:123465844|123466050 hsa-miR-6124 1 0 0
chr12:123465844|123466050 hsa-miR-6745 1 0 0
chr12:123465844|123466050 hsa-miR-6860 1 1 0
chr12:123465844|123466050 hsa-miR-7704 1 0 0
chr12:123465844|123466050 hsa-miR-8075 0 1 0
chr12:123465844|123466050 hsa-miR-4433b-3p 1 0 0
chr12:123465844|123466050 hsa-miR-6765-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6861-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6825-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6894-5p 1 0 0
chr12:123465844|123466050 hsa-miR-25-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6799-5p 1 0 0
chr12:123465844|123466050 hsa-miR-8071 1 0 0
chr12:123465844|123466050 hsa-miR-6833-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6757-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6746-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1301-3p 1 0 0
chr12:123465844|123466050 hsa-miR-6727-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6871-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1292-5p 1 0 0
chr12:123465844|123466050 hsa-miR-3180-3p 1 0 0
chr12:123465844|123466050 hsa-miR-6796-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6829-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6805-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1224-5p 1 0 0
chr12:123465844|123466050 hsa-miR-615-5p 1 0 0
chr12:123465844|123466050 hsa-miR-7109-5p 1 1 0
chr12:123465844|123466050 hsa-miR-204-3p 1 0 0
chr12:123465844|123466050 hsa-miR-3691-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4764-5p 1 0 0
chr12:123465844|123466050 hsa-miR-92b-5p 1 1 0
chr12:123465844|123466050 hsa-miR-3677-3p 1 0 0
chr12:123465844|123466050 hsa-miR-6717-5p 1 0 0
chr12:123465844|123466050 hsa-miR-3162-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4800-5p 1 0 0
chr12:123465844|123466050 hsa-miR-3191-3p 1 1 0
chr12:123465844|123466050 hsa-miR-1298-3p 1 1 0
chr12:123465844|123466050 hsa-miR-21-5p 0 1 0
chr12:123465844|123466050 hsa-miR-10400-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1207-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6812-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6816-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6870-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1343-5p 1 0 0
chr12:123465844|123466050 hsa-miR-5001-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6737-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6756-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6803-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6851-5p 1 1 0
chr12:123465844|123466050 hsa-miR-7107-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6751-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6774-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6797-5p 1 0 0
chr12:123465844|123466050 hsa-miR-7111-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4728-5p 1 0 0
chr12:123465844|123466050 hsa-miR-5189-5p 1 0 0
chr12:123465844|123466050 hsa-miR-5196-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6780b-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1237-5p 1 1 0
chr12:123465844|123466050 hsa-miR-328-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4632-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6794-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6795-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6846-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6848-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6887-5p 1 0 0
chr12:123465844|123466050 hsa-miR-3187-5p 1 1 0
chr12:123465844|123466050 hsa-miR-4697-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4723-5p 1 0 0
chr12:123465844|123466050 hsa-miR-6885-5p 1 0 0
chr12:123465844|123466050 hsa-miR-939-5p 1 0 0
chr12:123465844|123466050 hsa-miR-1285-3p 1 1 0
chr12:123465844|123466050 hsa-miR-4665-5p 1 1 0
chr12:123465844|123466050 hsa-miR-7151-3p 1 0 0
chr12:123465844|123466050 hsa-miR-6891-5p 1 0 0
chr12:123465844|123466050 hsa-miR-4716-3p 1 0 0
chr12:123465844|123466050 hsa-miR-363-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:123465844|123466050
ORF Type ORF1
Protein Length 51
Nucleotide Length 153
Protein Sequence MPRLLFSPKTASKSPRDPPFESPFQLVVHKYLMLVNNQAISISVSFDHGTL
Nucleotide Sequence TTGCCCAGACTCCTTTTTTCCCCCAAGACCGCCTCCAAGTCGCCGAGGGATCCACCCTTTGAGAGTCCTTTCCAGCTCGTAGTCCACAAATATCTCATGCTGGTCAATAACCAGGCCATCAGCATCTCGGTAAGCTTTGATCACGGCACGCTC
CircID chr12:123465844|123466050
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDRPFRKPINLPV
Nucleotide Sequence CTGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAGGCGGTCTTGGGGGAAAAAAGGAGTCTGGGCAACTGAGATTTGGGGGACGGGACCGGCCTTTTCGAAAACCTATTAACTTGCCAGTT
CircID chr12:123465844|123466050
ORF Type ORF3
Protein Length 42
Nucleotide Length 129
Protein Sequence MLMAWLLTSMRYLWTTSWKGLSKGGSLGDLEAVLGEKRSLGN
Nucleotide Sequence ATGCTGATGGCCTGGTTATTGACCAGCATGAGATATTTGTGGACTACGAGCTGGAAAGGACTCTCAAAGGGTGGATCCCTCGGCGACTTGGAGGCGGTCTTGGGGGAAAAAAGGAGTCTGGGCAACTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab