CircNet

General Information

circRNA Basic Information

CircID	chr12:123718623\|123737271
Strand	+
CircType	exon
Host Gene	ENSG00000185344.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	CTCAACCAGAACGTAAGTTCTTTCCAAAGAAAATTTGTTGGTGAGGTGAAGAGGTGTGAAGAGCTAGAGCGAATATTGGGTACTGCACAAAACCGAGGACTATTTGAGGCAAGTGCTATGTAAAGCCGCCGAGTCTGTCTACAGCCGTGTGATCCAGGTGAAGAAAATGAAGGCCATCTATCACATGCTGAACATGTGCAGCTTTGACGTGACCAACAAGTGCCTCATTGCTGAGGTCTGGTGTCCCGAGGCGGATCTGCAGGACCTGCGCCGGGCACTGGAGGAGGGCTCG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:123718623\|123737271	hsa-miR-143-5p	0	1	1
chr12:123718623\|123737271	hsa-miR-205-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:123718623\|123737271
ORF Type	ORF1
Protein Length	42
Nucleotide Length	126
Protein Sequence	MKAIYHMLNMCSFDVTNKCLIAEVWCPEADLQDLRRALEEGS
Nucleotide Sequence	ATGAAGGCCATCTATCACATGCTGAACATGTGCAGCTTTGACGTGACCAACAAGTGCCTCATTGCTGAGGTCTGGTGTCCCGAGGCGGATCTGCAGGACCTGCGCCGGGCACTGGAGGAGGGCTCG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:123718623\|123737271	MOV10	1	2	1
chr12:123718623\|123737271	ELAVL1	2	1	2
chr12:123718623\|123737271	DHX9	1	0	0
chr12:123718623\|123737271	PRPF8	0	3	3
chr12:123718623\|123737271	UPF1	0	2	0
chr12:123718623\|123737271	TAF15	0	0	1
chr12:123718623\|123737271	CAPRIN1	1	0	0
chr12:123718623\|123737271	FMR1	2	1	5
chr12:123718623\|123737271	CPSF6	0	0	2
chr12:123718623\|123737271	FUS	0	1	0
chr12:123718623\|123737271	SRSF1	0	3	6
chr12:123718623\|123737271	NOP58	0	1	1
chr12:123718623\|123737271	U2AF1	1	0	2
chr12:123718623\|123737271	U2AF2	7	3	3
chr12:123718623\|123737271	SRSF9	0	2	2
chr12:123718623\|123737271	DDX54	1	0	5
chr12:123718623\|123737271	RBM10	2	0	0
chr12:123718623\|123737271	HNRNPA2B1	0	1	0
chr12:123718623\|123737271	PTBP1	0	0	1
chr12:123718623\|123737271	HNRNPC	2	1	0
chr12:123718623\|123737271	ZNF184	0	0	2
chr12:123718623\|123737271	DDX3X	2	0	2
chr12:123718623\|123737271	ZC3H7B	0	0	1
chr12:123718623\|123737271	SMNDC1	0	0	1
chr12:123718623\|123737271	MSI2	0	0	1
chr12:123718623\|123737271	HNRNPA1	0	2	0
chr12:123718623\|123737271	RANGAP1	2	2	2
chr12:123718623\|123737271	LIN28B	1	0	3
chr12:123718623\|123737271	FXR1	0	0	4
chr12:123718623\|123737271	FXR2	0	0	3
chr12:123718623\|123737271	SND1	0	0	1
chr12:123718623\|123737271	IGF2BP2	1	2	5
chr12:123718623\|123737271	TARDBP	0	1	0
chr12:123718623\|123737271	BUD13	1	1	0
chr12:123718623\|123737271	RBFOX2	0	0	1
chr12:123718623\|123737271	EIF4G2	0	1	0
chr12:123718623\|123737271	BCCIP	0	0	2
chr12:123718623\|123737271	ILF3	1	0	0
chr12:123718623\|123737271	XRN2	0	0	2
chr12:123718623\|123737271	HNRNPK	0	1	0
chr12:123718623\|123737271	AIFM1	0	1	1
chr12:123718623\|123737271	EIF4A3	0	1	5
chr12:123718623\|123737271	FBL	0	1	0

CircRNA Information