CircRNA Information

General Information
circRNA Basic Information
CircID chr12:123936200|123936372
Strand +
CircType exon
Host Gene ENSG00000197653.13;
Algorism CIRI2;
Sequence CTGAAGGAGGGCTAGGAGACTGCAGGAGGGAGAGCAATCACAGGTCCCAGAAGCGACTCCGGCCTCCTCCCGGCCCAGAGCTAGTCCTTAGAATGTGCTGCGCTCCTGAGCTTCTGTGGGAAGCTGCTTTTGCCTCTGATGGCCCCTGCCCACTGTGCTGCCCGTGCTAGCCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:123936200|123936372 hsa-miR-205-5p 0 0 1
chr12:123936200|123936372 hsa-miR-205-3p 0 0 1
chr12:123936200|123936372 hsa-miR-326 0 1 1
chr12:123936200|123936372 hsa-miR-492 0 0 1
chr12:123936200|123936372 hsa-miR-612 1 0 1
chr12:123936200|123936372 hsa-miR-621 0 0 1
chr12:123936200|123936372 hsa-miR-646 0 1 1
chr12:123936200|123936372 hsa-miR-765 0 0 1
chr12:123936200|123936372 hsa-miR-188-3p 0 0 1
chr12:123936200|123936372 hsa-miR-1207-5p 1 1 1
chr12:123936200|123936372 hsa-miR-330-5p 0 1 1
chr12:123936200|123936372 hsa-miR-1260 0 0 1
chr12:123936200|123936372 hsa-miR-128 0 0 1
chr12:123936200|123936372 hsa-miR-1285 0 0 1
chr12:123936200|123936372 hsa-miR-129-3p 0 0 1
chr12:123936200|123936372 hsa-miR-107 1 1 0
chr12:123936200|123936372 hsa-miR-557 1 0 0
chr12:123936200|123936372 hsa-miR-602 1 0 0
chr12:123936200|123936372 hsa-miR-636 1 0 0
chr12:123936200|123936372 hsa-miR-638 1 0 0
chr12:123936200|123936372 hsa-miR-663a 1 0 0
chr12:123936200|123936372 hsa-miR-762 1 0 0
chr12:123936200|123936372 hsa-miR-760 1 1 0
chr12:123936200|123936372 hsa-miR-940 1 0 0
chr12:123936200|123936372 hsa-miR-1976 0 1 0
chr12:123936200|123936372 hsa-miR-3131 1 0 0
chr12:123936200|123936372 hsa-miR-3132 1 0 0
chr12:123936200|123936372 hsa-miR-3138 1 0 0
chr12:123936200|123936372 hsa-miR-3141 1 0 0
chr12:123936200|123936372 hsa-miR-3196 1 0 0
chr12:123936200|123936372 hsa-miR-3197 1 0 0
chr12:123936200|123936372 hsa-miR-4290 0 1 0
chr12:123936200|123936372 hsa-miR-3649 0 1 0
chr12:123936200|123936372 hsa-miR-4469 0 1 0
chr12:123936200|123936372 hsa-miR-4479 1 0 0
chr12:123936200|123936372 hsa-miR-4498 0 1 0
chr12:123936200|123936372 hsa-miR-4521 0 1 0
chr12:123936200|123936372 hsa-miR-1587 1 0 0
chr12:123936200|123936372 hsa-miR-3960 1 0 0
chr12:123936200|123936372 hsa-miR-4651 1 0 0
chr12:123936200|123936372 hsa-miR-4688 1 0 0
chr12:123936200|123936372 hsa-miR-4706 1 0 0
chr12:123936200|123936372 hsa-miR-4739 1 1 0
chr12:123936200|123936372 hsa-miR-4759 0 1 0
chr12:123936200|123936372 hsa-miR-5705 1 0 0
chr12:123936200|123936372 hsa-miR-5787 1 0 0
chr12:123936200|123936372 hsa-miR-6090 1 0 0
chr12:123936200|123936372 hsa-miR-6860 1 0 0
chr12:123936200|123936372 hsa-miR-7150 1 0 0
chr12:123936200|123936372 hsa-miR-7974 1 0 0
chr12:123936200|123936372 hsa-miR-12115 1 0 0
chr12:123936200|123936372 hsa-miR-4433b-3p 1 0 0
chr12:123936200|123936372 hsa-miR-504-3p 1 0 0
chr12:123936200|123936372 hsa-miR-510-5p 0 1 0
chr12:123936200|123936372 hsa-miR-4433a-3p 1 0 0
chr12:123936200|123936372 hsa-miR-7106-5p 1 1 0
chr12:123936200|123936372 hsa-miR-6825-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6894-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6854-5p 0 1 0
chr12:123936200|123936372 hsa-miR-139-3p 1 0 0
chr12:123936200|123936372 hsa-miR-3622a-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6089 1 1 0
chr12:123936200|123936372 hsa-miR-4695-5p 0 1 0
chr12:123936200|123936372 hsa-miR-6820-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6721-5p 1 1 0
chr12:123936200|123936372 hsa-miR-3180-3p 1 0 0
chr12:123936200|123936372 hsa-miR-486-3p 1 0 0
chr12:123936200|123936372 hsa-miR-2467-3p 1 0 0
chr12:123936200|123936372 hsa-miR-6735-3p 1 1 0
chr12:123936200|123936372 hsa-miR-3934-3p 1 1 0
chr12:123936200|123936372 hsa-miR-6786-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1229-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4640-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1228-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6771-5p 1 0 0
chr12:123936200|123936372 hsa-miR-92b-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3677-3p 1 0 0
chr12:123936200|123936372 hsa-miR-4743-5p 1 0 0
chr12:123936200|123936372 hsa-miR-103a-3p 1 1 0
chr12:123936200|123936372 hsa-miR-4667-3p 0 1 0
chr12:123936200|123936372 hsa-miR-6789-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3162-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6781-5p 1 0 0
chr12:123936200|123936372 hsa-miR-194-3p 0 1 0
chr12:123936200|123936372 hsa-miR-7112-5p 1 1 0
chr12:123936200|123936372 hsa-miR-1225-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1236-3p 0 1 0
chr12:123936200|123936372 hsa-miR-4687-5p 0 1 0
chr12:123936200|123936372 hsa-miR-6867-3p 0 1 0
chr12:123936200|123936372 hsa-miR-3140-3p 1 0 0
chr12:123936200|123936372 hsa-miR-4529-5p 0 1 0
chr12:123936200|123936372 hsa-miR-4649-3p 1 0 0
chr12:123936200|123936372 hsa-miR-2277-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3664-3p 0 1 0
chr12:123936200|123936372 hsa-miR-4679 0 1 0
chr12:123936200|123936372 hsa-miR-10400-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4763-3p 1 1 0
chr12:123936200|123936372 hsa-miR-6787-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6816-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1343-5p 1 0 0
chr12:123936200|123936372 hsa-miR-5001-5p 0 1 0
chr12:123936200|123936372 hsa-miR-6743-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6756-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6813-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6722-3p 1 1 0
chr12:123936200|123936372 hsa-miR-6779-5p 1 1 0
chr12:123936200|123936372 hsa-miR-6879-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3620-5p 1 1 0
chr12:123936200|123936372 hsa-miR-4728-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6836-5p 1 0 0
chr12:123936200|123936372 hsa-miR-10392-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1237-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1909-3p 1 1 0
chr12:123936200|123936372 hsa-miR-328-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4632-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4649-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4726-5p 1 1 0
chr12:123936200|123936372 hsa-miR-6729-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6845-5p 1 0 0
chr12:123936200|123936372 hsa-miR-1266-5p 0 1 0
chr12:123936200|123936372 hsa-miR-3085-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3198 1 0 0
chr12:123936200|123936372 hsa-miR-3940-5p 1 0 0
chr12:123936200|123936372 hsa-miR-3184-5p 1 0 0
chr12:123936200|123936372 hsa-miR-6762-5p 1 1 0
chr12:123936200|123936372 hsa-miR-4756-5p 1 0 0
chr12:123936200|123936372 hsa-miR-708-5p 1 0 0
chr12:123936200|123936372 hsa-miR-4661-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:123936200|123936372
ORF Type ORF1
Protein Length 25
Nucleotide Length 78
Protein Sequence MCCAPELLWEAAFASDGPCPLCCPC
Nucleotide Sequence ATGTGCTGCGCTCCTGAGCTTCTGTGGGAAGCTGCTTTTGCCTCTGATGGCCCCTGCCCACTGTGCTGCCCGTGCTAG
CircID chr12:123936200|123936372
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MGREEAGVASGTCDCSPSCSLLALLQ
Nucleotide Sequence CTGGGCCGGGAGGAGGCCGGAGTCGCTTCTGGGACCTGTGATTGCTCTCCCTCCTGCAGTCTCCTAGCCCTCCTTCAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab