CircRNA Information

General Information
circRNA Basic Information
CircID chr12:124012999|124013210
Strand -
CircType exon
Host Gene ENSG00000179195.14;
Algorism CIRI2;
Sequence CTACATTGACCCAAGAAATATTTACGCAATCCCTAGCAGAACATTGTTTCTGAGGAGGCATATGTGAGATTGATTTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGAAAGA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:124012999|124013210 hsa-miR-181c-5p 0 0 1
chr12:124012999|124013210 hsa-miR-181c-3p 0 0 1
chr12:124012999|124013210 hsa-miR-216a-5p 0 0 1
chr12:124012999|124013210 hsa-miR-216a-3p 0 0 1
chr12:124012999|124013210 hsa-miR-134-5p 0 0 1
chr12:124012999|124013210 hsa-miR-134-3p 0 0 1
chr12:124012999|124013210 hsa-miR-492 0 1 1
chr12:124012999|124013210 hsa-miR-181d-5p 0 0 1
chr12:124012999|124013210 hsa-miR-181d-3p 0 0 1
chr12:124012999|124013210 hsa-miR-520g-5p 0 0 1
chr12:124012999|124013210 hsa-miR-520g-3p 0 0 1
chr12:124012999|124013210 hsa-miR-520h 0 0 1
chr12:124012999|124013210 hsa-miR-578 0 0 1
chr12:124012999|124013210 hsa-miR-603 0 0 1
chr12:124012999|124013210 hsa-miR-635 0 0 1
chr12:124012999|124013210 hsa-miR-649 0 0 1
chr12:124012999|124013210 hsa-miR-650 1 1 1
chr12:124012999|124013210 hsa-miR-1287-5p 0 0 1
chr12:124012999|124013210 hsa-miR-1287-3p 0 0 1
chr12:124012999|124013210 hsa-miR-1305 0 0 1
chr12:124012999|124013210 hsa-miR-532-5p 0 0 1
chr12:124012999|124013210 hsa-miR-342-3p 0 0 1
chr12:124012999|124013210 hsa-miR-181a 0 0 1
chr12:124012999|124013210 hsa-miR-181b 0 0 1
chr12:124012999|124013210 hsa-miR-638 1 0 0
chr12:124012999|124013210 hsa-miR-3193 0 1 0
chr12:124012999|124013210 hsa-miR-4324 0 1 0
chr12:124012999|124013210 hsa-miR-4260 1 0 0
chr12:124012999|124013210 hsa-miR-3612 1 1 0
chr12:124012999|124013210 hsa-miR-3649 0 1 0
chr12:124012999|124013210 hsa-miR-4443 0 1 0
chr12:124012999|124013210 hsa-miR-4642 1 0 0
chr12:124012999|124013210 hsa-miR-1843 0 1 0
chr12:124012999|124013210 hsa-miR-1247-3p 1 1 0
chr12:124012999|124013210 hsa-miR-766-5p 1 0 0
chr12:124012999|124013210 hsa-miR-6727-5p 1 0 0
chr12:124012999|124013210 hsa-miR-6806-5p 1 0 0
chr12:124012999|124013210 hsa-miR-6821-5p 0 1 0
chr12:124012999|124013210 hsa-miR-1226-5p 0 1 0
chr12:124012999|124013210 hsa-miR-3691-5p 0 1 0
chr12:124012999|124013210 hsa-miR-4695-3p 0 1 0
chr12:124012999|124013210 hsa-miR-1285-5p 0 1 0
chr12:124012999|124013210 hsa-miR-6775-5p 1 0 0
chr12:124012999|124013210 hsa-miR-328-5p 1 0 0
chr12:124012999|124013210 hsa-miR-3198 0 1 0
chr12:124012999|124013210 hsa-miR-769-3p 0 1 0
chr12:124012999|124013210 hsa-miR-6829-3p 0 1 0
chr12:124012999|124013210 hsa-miR-7-1-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


    by mir_boxplot.py


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    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:124012999|124013210
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MWTSEHPRRMALRSQSQTSLPGIPARCLHS
Nucleotide Sequence ATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGA

CircID chr12:124012999|124013210
ORF Type ORF2
Protein Length 46
Nucleotide Length 138
Protein Sequence MLVHAKCVPQVDFECGPLSIHAGWLSGPSHRRRFLGFQHDASIVER
Nucleotide Sequence TTGTTGGTTCATGCCAAGTGTGTTCCACAGGTTGACTTTGAATGTGGACCTCTGAGCATCCACGCAGGATGGCTCTCAGGTCCCAGTCACAGACGTCGCTTCCTGGGATTCCAGCACGATGCCTCCATAGTTGAAAGA

CircID chr12:124012999|124013210
ORF Type ORF3
Protein Length 25
Nucleotide Length 78
Protein Sequence MGPESHPAWMLRGPHSKSTCGTHLA
Nucleotide Sequence CTGGGACCTGAGAGCCATCCTGCGTGGATGCTCAGAGGTCCACATTCAAAGTCAACCTGTGGAACACACTTGGCATGA

CircID chr12:124012999|124013210
ORF Type ORF4
Protein Length 43
Nucleotide Length 132
Protein Sequence MRAILRGCSEVHIQSQPVEHTWHEPTNQSHICLLRNNVLLGIA
Nucleotide Sequence CTGAGAGCCATCCTGCGTGGATGCTCAGAGGTCCACATTCAAAGTCAACCTGTGGAACACACTTGGCATGAACCAACAAATCAATCTCACATATGCCTCCTCAGAAACAATGTTCTGCTAGGGATTGCGTAA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites