CircNet

General Information

circRNA Basic Information

CircID	chr12:124419957\|124430787
Strand	-
CircType	exon
Host Gene	ENSG00000196498.13;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAGCAGAAGTTCTGCCAGCGCTATGACCAGCTCATGGAGGCCTGGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAGCAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTTCCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAGACAGTGGCTGAGTGCGTCCTCTATTACTACCTGACTAAGAAGAATGAGAACTATAAGAGCCTGGTGAGACGGAGCTATCGGCGCCGCGGCAAGAGCCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:124419957\|124430787	hsa-miR-7-5p	0	1	1
chr12:124419957\|124430787	hsa-miR-27a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:124419957\|124430787
ORF Type	ORF1
Protein Length	189
Nucleotide Length	567
Protein Sequence	MEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQRELQERMQSRVGQRGSGLSMSAARSEHEVSEIIDGLSEQENLEKQMRQLAVIPPMLYDADQQRIKFINMNGLMADPMKVYKDRQVMNMWSEQEKETFREKFMQHPKNFGLIASFLERKTVAECVLYYYLTKKNENYKSLVRRSYRRRGKSQ
Nucleotide Sequence	ATGGAGGCCTGGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAGCAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCCAGCTGGCCGTGATCCCGCCCATGCTGTACGACGCTGACCAGCAGCGCATCAAGTTCATCAACATGAACGGGCTTATGGCCGACCCCATGAAGGTGTACAAAGACCGCCAGGTCATGAACATGTGGAGTGAGCAGGAGAAGGAGACCTTCCGGGAGAAGTTCATGCAGCATCCCAAGAACTTTGGCCTGATCGCATCATTCCTGGAGAGGAAGACAGTGGCTGAGTGCGTCCTCTATTACTACCTGACTAAGAAGAATGAGAACTATAAGAGCCTGGTGAGACGGAGCTATCGGCGCCGCGGCAAGAGCCAG

CircID	chr12:124419957\|124430787
ORF Type	ORF2
Protein Length	113
Nucleotide Length	339
Protein Sequence	MNFSRKVSFSCSLHMFMTWRSLYTFMGSAISPFMLMNLMRCWSASYSMGGITASWRICFSRFSCSERPSMISDTSCSLRAADMDSPLPRWPTLLCMRSCSSRCLRISGNCFS*
Nucleotide Sequence	ATGAACTTCTCCCGGAAGGTCTCCTTCTCCTGCTCACTCCACATGTTCATGACCTGGCGGTCTTTGTACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTTGATGAACTTGATGCGCTGCTGGTCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTGGCGCATCTGCTTCTCCAGGTTCTCCTGCTCTGAGAGGCCATCGATGATCTCTGACACCTCGTGCTCGCTGCGGGCGGCCGACATGGACAGCCCACTGCCCCGCTGGCCCACCCTGCTCTGCATGCGCTCCTGCAGCTCGCGCTGCTTGCGGATCTCAGGGAACTGCTTCTCGTAG

CircID	chr12:124419957\|124430787
ORF Type	ORF3
Protein Length	93
Nucleotide Length	279
Protein Sequence	MTSSWRPGRRRWSASRTTPGGGPRRARCASTTRSSSLRSASSASCRSACRAGWASGAVGCPCRPPAASTRCQRSSMASQSRRTWRSRCASWP*
Nucleotide Sequence	ATGACCAGCTCATGGAGGCCTGGGAGAAGAAGGTGGAGCGCATCGAGAACAACCCCCGGCGGCGGGCCAAGGAGAGCAAGGTGCGCGAGTACTACGAGAAGCAGTTCCCTGAGATCCGCAAGCAGCGCGAGCTGCAGGAGCGCATGCAGAGCAGGGTGGGCCAGCGGGGCAGTGGGCTGTCCATGTCGGCCGCCCGCAGCGAGCACGAGGTGTCAGAGATCATCGATGGCCTCTCAGAGCAGGAGAACCTGGAGAAGCAGATGCGCCAGCTGGCCGTGA

CircID	chr12:124419957\|124430787
ORF Type	ORF4
Protein Length	68
Nucleotide Length	204
Protein Sequence	MLHELLPEGLLLLLTPHVHDLAVFVHLHGVGHKPVHVDELDALLVSVVQHGRDHGQLAHLLLQVLLL*
Nucleotide Sequence	ATGCTGCATGAACTTCTCCCGGAAGGTCTCCTTCTCCTGCTCACTCCACATGTTCATGACCTGGCGGTCTTTGTACACCTTCATGGGGTCGGCCATAAGCCCGTTCATGTTGATGAACTTGATGCGCTGCTGGTCAGCGTCGTACAGCATGGGCGGGATCACGGCCAGCTGGCGCATCTGCTTCTCCAGGTTCTCCTGCTCTGA

CircID	chr12:124419957\|124430787
ORF Type	ORF5
Protein Length	76
Nucleotide Length	228
Protein Sequence	VLAAGGRHGQPTAPLAHPALHALLQLALLADLRELLLVVLAHLALLGPPPGVVLDALHLLLPGLHELVIALAELLL
Nucleotide Sequence	GTGCTCGCTGCGGGCGGCCGACATGGACAGCCCACTGCCCCGCTGGCCCACCCTGCTCTGCATGCGCTCCTGCAGCTCGCGCTGCTTGCGGATCTCAGGGAACTGCTTCTCGTAGTACTCGCGCACCTTGCTCTCCTTGGCCCGCCGCCGGGGGTTGTTCTCGATGCGCTCCACCTTCTTCTCCCAGGCCTCCATGAGCTGGTCATAGCGCTGGCAGAACTTCTGCTC

CircID	chr12:124419957\|124430787
ORF Type	ORF6
Protein Length	70
Nucleotide Length	210
Protein Sequence	SLTPRARCGRPTWTAHCPAGPPCSACAPAARAACGSQGTASRSTRAPCSPWPAAGGCSRCAPPSSPRPP*
Nucleotide Sequence	TCTCTGACACCTCGTGCTCGCTGCGGGCGGCCGACATGGACAGCCCACTGCCCCGCTGGCCCACCCTGCTCTGCATGCGCTCCTGCAGCTCGCGCTGCTTGCGGATCTCAGGGAACTGCTTCTCGTAGTACTCGCGCACCTTGCTCTCCTTGGCCCGCCGCCGGGGGTTGTTCTCGATGCGCTCCACCTTCTTCTCCCAGGCCTCCATGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:124419957\|124430787	SLBP	0	0	1
chr12:124419957\|124430787	MOV10	0	0	1
chr12:124419957\|124430787	ELAVL1	0	1	2
chr12:124419957\|124430787	SF3B4	2	0	0
chr12:124419957\|124430787	CELF2	4	0	2
chr12:124419957\|124430787	CNBP	0	0	2
chr12:124419957\|124430787	TAF15	0	1	0
chr12:124419957\|124430787	FMR1	0	0	13
chr12:124419957\|124430787	TROVE2	1	0	0
chr12:124419957\|124430787	XRCC6	0	0	2
chr12:124419957\|124430787	GNL3	0	1	0
chr12:124419957\|124430787	SRSF7	2	0	0
chr12:124419957\|124430787	DROSHA	0	0	2
chr12:124419957\|124430787	FASTKD2	0	0	2
chr12:124419957\|124430787	NOP58	0	0	5
chr12:124419957\|124430787	NONO	0	0	2
chr12:124419957\|124430787	U2AF2	0	3	0
chr12:124419957\|124430787	DDX54	2	0	19
chr12:124419957\|124430787	EFTUD2	0	0	2
chr12:124419957\|124430787	HNRNPM	0	0	4
chr12:124419957\|124430787	RBM15	0	0	1
chr12:124419957\|124430787	HNRNPC	1	0	1
chr12:124419957\|124430787	TRA2A	0	0	3
chr12:124419957\|124430787	AGO2	0	2	0
chr12:124419957\|124430787	MSI2	0	0	2
chr12:124419957\|124430787	MSI1	0	1	0
chr12:124419957\|124430787	ACIN1	0	0	3
chr12:124419957\|124430787	LIN28A	0	0	1
chr12:124419957\|124430787	FXR1	0	0	4
chr12:124419957\|124430787	FXR2	1	0	5
chr12:124419957\|124430787	UCHL5	0	0	1
chr12:124419957\|124430787	SRSF1	0	0	1
chr12:124419957\|124430787	IGF2BP3	0	0	3
chr12:124419957\|124430787	IGF2BP2	0	0	15
chr12:124419957\|124430787	FTO	2	0	0
chr12:124419957\|124430787	TARDBP	20	2	0
chr12:124419957\|124430787	PRKRA	1	0	0
chr12:124419957\|124430787	RBFOX2	0	1	0
chr12:124419957\|124430787	PRPF8	0	2	0
chr12:124419957\|124430787	EIF4G2	2	0	0
chr12:124419957\|124430787	CSTF2T	1	0	4
chr12:124419957\|124430787	CSTF2	0	0	1
chr12:124419957\|124430787	FUS	0	5	0
chr12:124419957\|124430787	RBM22	0	1	0
chr12:124419957\|124430787	ALKBH5	0	1	0
chr12:124419957\|124430787	EWSR1	0	0	1
chr12:124419957\|124430787	EIF4A3	1	6	8
chr12:124419957\|124430787	FBL	2	1	3

CircRNA Information