CircNet

General Information

circRNA Basic Information

CircID	chr12:128814775\|128815070
Strand	-
CircType	exon
Host Gene	ENSG00000139370.10;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTTAAAGATCGAGGTCCGGAAGCCACTAGGAGATTTTTTAATTGGTTTTATTGGAGCATTAACCTGGGAGCGATCCTGTCGTTAGGTGGCATTGCCTATATTCAGCAGAACGTCAGCTTTGTCACTGGTTATGCGATCCCCACTGTCTGCGTCGGCCTTGCTTTTGTGGTCTTCCTCTGTGGCCAGAGCGTTTTCATCACCAAGCCTCCTGATGGCAGTGCCTTCACCGACATGTTCAAGATACTGACGTATTCCTGCTGTTCCCAGAAGCGAAGTGGAGAGCGCCAGAGTAATGG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:128814775\|128815070	hsa-miR-34a-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-34a-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-214-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-214-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-185-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-185-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-370-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-370-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-346	0	0	1
chr12:128814775\|128815070	hsa-miR-449a	0	0	1
chr12:128814775\|128815070	hsa-miR-412-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-412-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-519e-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-519e-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-632	0	0	1
chr12:128814775\|128815070	hsa-miR-649	0	0	1
chr12:128814775\|128815070	hsa-miR-449b-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-449b-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-668-5p	0	0	1
chr12:128814775\|128815070	hsa-miR-668-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-920	0	0	1
chr12:128814775\|128815070	hsa-miR-922	0	0	1
chr12:128814775\|128815070	hsa-miR-1234-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-663b	0	0	1
chr12:128814775\|128815070	hsa-miR-1256	0	0	1
chr12:128814775\|128815070	hsa-miR-1234	0	0	1
chr12:128814775\|128815070	hsa-miR-671-5p	1	1	1
chr12:128814775\|128815070	hsa-miR-490-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-339-3p	0	0	1
chr12:128814775\|128815070	hsa-miR-515-3p	0	1	1
chr12:128814775\|128815070	hsa-miR-34c-5p	0	1	1
chr12:128814775\|128815070	hsa-miR-637	1	0	0
chr12:128814775\|128815070	hsa-miR-4689	1	0	0
chr12:128814775\|128815070	hsa-miR-4784	1	0	0
chr12:128814775\|128815070	hsa-miR-6090	1	0	0
chr12:128814775\|128815070	hsa-miR-12115	1	0	0
chr12:128814775\|128815070	hsa-miR-12117	0	1	0
chr12:128814775\|128815070	hsa-miR-4435	1	1	0
chr12:128814775\|128815070	hsa-miR-7851-3p	1	1	0
chr12:128814775\|128815070	hsa-miR-6089	1	0	0
chr12:128814775\|128815070	hsa-miR-3192-5p	1	1	0
chr12:128814775\|128815070	hsa-miR-7847-3p	1	0	0
chr12:128814775\|128815070	hsa-miR-3677-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6727-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-3190-3p	1	0	0
chr12:128814775\|128815070	hsa-miR-6805-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6827-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6717-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6824-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6781-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-3120-5p	0	1	0
chr12:128814775\|128815070	hsa-miR-3074-5p	0	1	0
chr12:128814775\|128815070	hsa-miR-605-3p	1	1	0
chr12:128814775\|128815070	hsa-miR-335-3p	0	1	0
chr12:128814775\|128815070	hsa-miR-597-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-6775-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-1343-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-4726-5p	1	0	0
chr12:128814775\|128815070	hsa-miR-3059-5p	0	1	0
chr12:128814775\|128815070	hsa-miR-6876-3p	0	1	0
chr12:128814775\|128815070	hsa-miR-487a-5p	0	1	0
chr12:128814775\|128815070	hsa-miR-190b-5p	0	1	0

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:128814775\|128815070
ORF Type	ORF1
Protein Length	39
Nucleotide Length	117
Protein Sequence	MRSPLSASALLLWSSSVARAFSSPSLLMAVPSPTCSRY*
Nucleotide Sequence	ATGCGATCCCCACTGTCTGCGTCGGCCTTGCTTTTGTGGTCTTCCTCTGTGGCCAGAGCGTTTTCATCACCAAGCCTCCTGATGGCAGTGCCTTCACCGACATGTTCAAGATACTGA

CircID	chr12:128814775\|128815070
ORF Type	ORF2
Protein Length	35
Nucleotide Length	105
Protein Sequence	MSVKALPSGGLVMKTLWPQRKTTKARPTQTVGIA*
Nucleotide Sequence	ATGTCGGTGAAGGCACTGCCATCAGGAGGCTTGGTGATGAAAACGCTCTGGCCACAGAGGAAGACCACAAAAGCAAGGCCGACGCAGACAGTGGGGATCGCATAA

CircID	chr12:128814775\|128815070
ORF Type	ORF3
Protein Length	71
Nucleotide Length	213
Protein Sequence	ITLALSTSLLGTAGIRQYLEHVGEGTAIRRLGDENALATEEDHKSKADADSGDRITSDKADVLLNIGNAT*
Nucleotide Sequence	ATTACTCTGGCGCTCTCCACTTCGCTTCTGGGAACAGCAGGAATACGTCAGTATCTTGAACATGTCGGTGAAGGCACTGCCATCAGGAGGCTTGGTGATGAAAACGCTCTGGCCACAGAGGAAGACCACAAAAGCAAGGCCGACGCAGACAGTGGGGATCGCATAACCAGTGACAAAGCTGACGTTCTGCTGAATATAGGCAATGCCACCTAA

CircID	chr12:128814775\|128815070
ORF Type	ORF1
Protein Length	36
Nucleotide Length	111
Protein Sequence	MNMSVKALPSGGLVMKTLWPQRKTTKARPTQTVGIA
Nucleotide Sequence	TTGAACATGTCGGTGAAGGCACTGCCATCAGGAGGCTTGGTGATGAAAACGCTCTGGCCACAGAGGAAGACCACAAAAGCAAGGCCGACGCAGACAGTGGGGATCGCATAA

CircID	chr12:128814775\|128815070
ORF Type	ORF2
Protein Length	68
Nucleotide Length	207
Protein Sequence	MALSTSLLGTAGIRQYLEHVGEGTAIRRLGDENALATEEDHKSKADADSGDRITSDKADVLLNIGNAT
Nucleotide Sequence	CTGGCGCTCTCCACTTCGCTTCTGGGAACAGCAGGAATACGTCAGTATCTTGAACATGTCGGTGAAGGCACTGCCATCAGGAGGCTTGGTGATGAAAACGCTCTGGCCACAGAGGAAGACCACAAAAGCAAGGCCGACGCAGACAGTGGGGATCGCATAACCAGTGACAAAGCTGACGTTCTGCTGAATATAGGCAATGCCACCTAA

CircID	chr12:128814775\|128815070
ORF Type	ORF3
Protein Length	77
Nucleotide Length	231
Protein Sequence	MGAILSLGGIAYIQQNVSFVTGYAIPTVCVGLAFVVFLCGQSVFITKPPDGSAFTDMFKILTYSCCSQKRSGERQSN
Nucleotide Sequence	CTGGGAGCGATCCTGTCGTTAGGTGGCATTGCCTATATTCAGCAGAACGTCAGCTTTGTCACTGGTTATGCGATCCCCACTGTCTGCGTCGGCCTTGCTTTTGTGGTCTTCCTCTGTGGCCAGAGCGTTTTCATCACCAAGCCTCCTGATGGCAGTGCCTTCACCGACATGTTCAAGATACTGACGTATTCCTGCTGTTCCCAGAAGCGAAGTGGAGAGCGCCAGAGTAAT

CircID	chr12:128814775\|128815070
ORF Type	ORF4
Protein Length	51
Nucleotide Length	156
Protein Sequence	MPIFSRTSALSLVMRSPLSASALLLWSSSVARAFSSPSLLMAVPSPTCSRY
Nucleotide Sequence	TTGCCTATATTCAGCAGAACGTCAGCTTTGTCACTGGTTATGCGATCCCCACTGTCTGCGTCGGCCTTGCTTTTGTGGTCTTCCTCTGTGGCCAGAGCGTTTTCATCACCAAGCCTCCTGATGGCAGTGCCTTCACCGACATGTTCAAGATACTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:128814775\|128815070	U2AF2	5	6	5
chr12:128814775\|128815070	ELAVL1	0	1	3
chr12:128814775\|128815070	CELF2	0	4	0
chr12:128814775\|128815070	PRPF8	0	5	1
chr12:128814775\|128815070	TAF15	0	2	0
chr12:128814775\|128815070	FMR1	0	1	0
chr12:128814775\|128815070	TROVE2	0	2	0
chr12:128814775\|128815070	FUS	2	1	0
chr12:128814775\|128815070	DGCR8	0	3	0
chr12:128814775\|128815070	SRSF1	0	1	1
chr12:128814775\|128815070	NOP58	2	2	0
chr12:128814775\|128815070	U2AF1	0	1	0
chr12:128814775\|128815070	NOP56	2	0	0
chr12:128814775\|128815070	SRSF9	0	0	1
chr12:128814775\|128815070	HNRNPU	0	1	0
chr12:128814775\|128815070	DDX54	0	1	3
chr12:128814775\|128815070	RBM10	1	3	0
chr12:128814775\|128815070	HNRNPM	0	2	0
chr12:128814775\|128815070	HNRNPC	0	1	1
chr12:128814775\|128815070	KHSRP	1	0	0
chr12:128814775\|128815070	ZNF184	0	2	0
chr12:128814775\|128815070	DDX3X	0	0	1
chr12:128814775\|128815070	SMNDC1	0	0	1
chr12:128814775\|128815070	HNRNPA1	0	1	0
chr12:128814775\|128815070	LIN28B	0	0	2
chr12:128814775\|128815070	SND1	0	1	6
chr12:128814775\|128815070	GTF2F1	0	1	0
chr12:128814775\|128815070	IGF2BP3	0	0	2
chr12:128814775\|128815070	IGF2BP2	0	1	5
chr12:128814775\|128815070	TARDBP	1	7	0
chr12:128814775\|128815070	BUD13	0	0	1
chr12:128814775\|128815070	RBFOX2	0	2	1
chr12:128814775\|128815070	EIF4G2	0	1	0
chr12:128814775\|128815070	DDX42	0	1	0
chr12:128814775\|128815070	CSTF2T	0	1	0
chr12:128814775\|128815070	TIA1	0	1	0
chr12:128814775\|128815070	RBM22	0	2	0
chr12:128814775\|128815070	XRN2	0	1	0
chr12:128814775\|128815070	HNRNPK	0	1	0
chr12:128814775\|128815070	FBL	1	2	1
chr12:128814775\|128815070	EIF4A3	2	4	3
chr12:128814775\|128815070	AGO2	0	0	2

CircRNA Information