CircRNA Information

General Information
circRNA Basic Information
CircID chr12:12908530|12908645
Strand +
CircType exon
Host Gene ENSG00000013588.5;
Algorism CIRI2;
Sequence CAACAGGGAAAGGGGCTTCCTCCCCCGGACGAGCTTGGTCAGACTGACAGCATGAGCCAGCAGGCAGGAGAAGCAGATGGAAAAGAGGATCCCAAAGAGGAAGAAGCGTGTGGGCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:12908530|12908645 hsa-miR-223-5p 0 0 1
chr12:12908530|12908645 hsa-miR-223-3p 0 0 1
chr12:12908530|12908645 hsa-miR-149-5p 0 0 1
chr12:12908530|12908645 hsa-miR-149-3p 0 0 1
chr12:12908530|12908645 hsa-miR-370-5p 0 0 1
chr12:12908530|12908645 hsa-miR-370-3p 0 0 1
chr12:12908530|12908645 hsa-miR-587 0 0 1
chr12:12908530|12908645 hsa-miR-622 0 1 1
chr12:12908530|12908645 hsa-miR-626 0 0 1
chr12:12908530|12908645 hsa-miR-638 1 0 1
chr12:12908530|12908645 hsa-miR-671-5p 0 0 1
chr12:12908530|12908645 hsa-miR-339-5p 0 0 1
chr12:12908530|12908645 hsa-miR-769-3p 1 0 1
chr12:12908530|12908645 hsa-miR-450b-3p 1 1 1
chr12:12908530|12908645 hsa-miR-1274a 0 0 1
chr12:12908530|12908645 hsa-miR-1274b 0 0 1
chr12:12908530|12908645 hsa-miR-9 0 0 1
chr12:12908530|12908645 hsa-miR-24 0 0 1
chr12:12908530|12908645 hsa-miR-1976 1 1 0
chr12:12908530|12908645 hsa-miR-3909 1 0 0
chr12:12908530|12908645 hsa-miR-4654 1 0 0
chr12:12908530|12908645 hsa-miR-4686 0 1 0
chr12:12908530|12908645 hsa-miR-4741 1 0 0
chr12:12908530|12908645 hsa-miR-12116 1 0 0
chr12:12908530|12908645 hsa-miR-6881-3p 1 1 0
chr12:12908530|12908645 hsa-miR-6875-3p 0 1 0
chr12:12908530|12908645 hsa-miR-23b-5p 1 0 0
chr12:12908530|12908645 hsa-miR-877-3p 1 0 0
chr12:12908530|12908645 hsa-miR-7109-5p 1 0 0
chr12:12908530|12908645 hsa-miR-3944-3p 1 0 0
chr12:12908530|12908645 hsa-miR-5580-5p 0 1 0
chr12:12908530|12908645 hsa-miR-3667-3p 1 0 0
chr12:12908530|12908645 hsa-miR-7111-3p 1 0 0
chr12:12908530|12908645 hsa-miR-6769a-3p 0 1 0
chr12:12908530|12908645 hsa-miR-7151-5p 1 0 0
chr12:12908530|12908645 hsa-miR-5088-3p 1 0 0
chr12:12908530|12908645 hsa-miR-335-3p 0 1 0
chr12:12908530|12908645 hsa-miR-130b-5p 0 1 0
chr12:12908530|12908645 hsa-miR-6847-3p 0 1 0
chr12:12908530|12908645 hsa-miR-7111-5p 1 1 0
chr12:12908530|12908645 hsa-miR-6754-3p 1 0 0
chr12:12908530|12908645 hsa-miR-1271-3p 1 0 0
chr12:12908530|12908645 hsa-miR-6893-3p 0 1 0
chr12:12908530|12908645 hsa-miR-11181-5p 0 1 0
chr12:12908530|12908645 hsa-miR-4723-3p 1 0 0
chr12:12908530|12908645 hsa-miR-6781-3p 1 1 0
chr12:12908530|12908645 hsa-miR-99b-3p 0 1 0
chr12:12908530|12908645 hsa-miR-4676-3p 1 0 0
chr12:12908530|12908645 hsa-miR-130a-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:12908530|12908645
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MLLLPAGSCCQSDQARPGEEAPFPV
Nucleotide Sequence CTGCTTCTCCTGCCTGCTGGCTCATGCTGTCAGTCTGACCAAGCTCGTCCGGGGGAGGAAGCCCCTTTCCCTGTT

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites