CircRNA Information

General Information
circRNA Basic Information
CircID chr12:12915510|12915683
Strand +
CircType exon
Host Gene ENSG00000013588.5;
Algorism CIRI2;
Sequence CCTGTCTCTACTAAAAATACAAAAATCAGCCGGGCATGGTGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAGAAGGAGAAACAACAGTCCAGAGATGATGCCATTTCCGGGGAAAGAGGTTGACTTGAGGAAGGCAGCCATGGGAATAAAAGCTCCCACAGATCCTTTTCA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:12915510|12915683 hsa-miR-326 1 0 1
chr12:12915510|12915683 hsa-miR-422a 0 0 1
chr12:12915510|12915683 hsa-miR-604 0 0 1
chr12:12915510|12915683 hsa-miR-647 0 0 1
chr12:12915510|12915683 hsa-miR-411-5p 0 0 1
chr12:12915510|12915683 hsa-miR-411-3p 0 0 1
chr12:12915510|12915683 hsa-miR-920 0 0 1
chr12:12915510|12915683 hsa-miR-1237-5p 0 0 1
chr12:12915510|12915683 hsa-miR-1237-3p 0 0 1
chr12:12915510|12915683 hsa-miR-1248 1 0 1
chr12:12915510|12915683 hsa-miR-1288-5p 0 0 1
chr12:12915510|12915683 hsa-miR-1288-3p 0 0 1
chr12:12915510|12915683 hsa-miR-330-5p 1 0 1
chr12:12915510|12915683 hsa-miR-378 0 0 1
chr12:12915510|12915683 hsa-miR-1269 0 0 1
chr12:12915510|12915683 hsa-miR-612 1 0 0
chr12:12915510|12915683 hsa-miR-943 1 0 0
chr12:12915510|12915683 hsa-miR-1281 1 0 0
chr12:12915510|12915683 hsa-miR-1470 1 0 0
chr12:12915510|12915683 hsa-miR-4268 1 0 0
chr12:12915510|12915683 hsa-miR-4279 1 1 0
chr12:12915510|12915683 hsa-miR-4642 0 1 0
chr12:12915510|12915683 hsa-miR-5193 1 1 0
chr12:12915510|12915683 hsa-miR-6749-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6747-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6892-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6881-3p 1 1 0
chr12:12915510|12915683 hsa-miR-6875-3p 1 1 0
chr12:12915510|12915683 hsa-miR-6762-3p 1 0 0
chr12:12915510|12915683 hsa-miR-7110-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6832-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6845-3p 1 0 0
chr12:12915510|12915683 hsa-miR-877-3p 1 1 0
chr12:12915510|12915683 hsa-miR-6868-3p 1 0 0
chr12:12915510|12915683 hsa-miR-942-5p 1 0 0
chr12:12915510|12915683 hsa-miR-4753-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6882-3p 1 1 0
chr12:12915510|12915683 hsa-miR-6740-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4436b-5p 1 0 0
chr12:12915510|12915683 hsa-miR-3667-3p 1 0 0
chr12:12915510|12915683 hsa-miR-3191-5p 1 0 0
chr12:12915510|12915683 hsa-miR-6809-3p 1 1 0
chr12:12915510|12915683 hsa-miR-7111-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6780a-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6830-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4667-3p 1 0 0
chr12:12915510|12915683 hsa-miR-593-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4707-5p 1 0 0
chr12:12915510|12915683 hsa-miR-1236-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4778-3p 0 1 0
chr12:12915510|12915683 hsa-miR-1238-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6867-3p 1 0 0
chr12:12915510|12915683 hsa-miR-208a-5p 0 1 0
chr12:12915510|12915683 hsa-miR-6758-3p 1 0 0
chr12:12915510|12915683 hsa-miR-5088-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6880-3p 1 0 0
chr12:12915510|12915683 hsa-miR-130b-5p 1 1 0
chr12:12915510|12915683 hsa-miR-6515-3p 1 0 0
chr12:12915510|12915683 hsa-miR-3127-3p 1 0 0
chr12:12915510|12915683 hsa-miR-320a-5p 1 1 0
chr12:12915510|12915683 hsa-miR-4685-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4755-5p 1 0 0
chr12:12915510|12915683 hsa-miR-6754-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4745-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6791-3p 1 0 0
chr12:12915510|12915683 hsa-miR-7107-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6756-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6792-3p 1 1 0
chr12:12915510|12915683 hsa-miR-6829-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4723-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4691-5p 1 1 0
chr12:12915510|12915683 hsa-miR-6781-3p 1 0 0
chr12:12915510|12915683 hsa-miR-5006-3p 1 0 0
chr12:12915510|12915683 hsa-miR-4769-3p 1 0 0
chr12:12915510|12915683 hsa-miR-6833-3p 1 0 0
chr12:12915510|12915683 hsa-miR-412-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:12915510|12915683
ORF Type ORF1
Protein Length 57
Nucleotide Length 171
Protein Sequence LSLLKIQKSAGHGGGGGGGEGGEGRRRNNSPEMMPFPGKEVDLRKAAMGIKAPTDPF
Nucleotide Sequence CTGTCTCTACTAAAAATACAAAAATCAGCCGGGCATGGTGGAGGAGGAGGAGGAGGAGAAGGAGGAGAAGGAAGAAGGAGAAACAACAGTCCAGAGATGATGCCATTTCCGGGGAAAGAGGTTGACTTGAGGAAGGCAGCCATGGGAATAAAAGCTCCCACAGATCCTTTT
CircID chr12:12915510|12915683
ORF Type ORF2
Protein Length 48
Nucleotide Length 144
Protein Sequence MAAFLKSTSFPGNGIISGLLFLLLPSPPSPPPPPPPCPADFCIFSRDR
Nucleotide Sequence ATGGCTGCCTTCCTCAAGTCAACCTCTTTCCCCGGAAATGGCATCATCTCTGGACTGTTGTTTCTCCTTCTTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCCACCATGCCCGGCTGATTTTTGTATTTTTAGTAGAGACAGG
CircID chr12:12915510|12915683
ORF Type ORF3
Protein Length 54
Nucleotide Length 162
Protein Sequence MWELLFPWLPSSSQPLSPEMASSLDCCFSFFLLLLLLLLLLHHARLIFVFLVET
Nucleotide Sequence CTGTGGGAGCTTTTATTCCCATGGCTGCCTTCCTCAAGTCAACCTCTTTCCCCGGAAATGGCATCATCTCTGGACTGTTGTTTCTCCTTCTTCCTTCTCCTCCTTCTCCTCCTCCTCCTCCTCCACCATGCCCGGCTGATTTTTGTATTTTTAGTAGAGACA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab