CircNet

General Information

circRNA Basic Information

CircID	chr12:130979020\|130979246
Strand	-
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCCTCAGCGCCCAAGGCAGGTGTTGCAGGAAGCCCGTTCATGAGGTGGGTGTGGGTGGTGCCAGCCAGGTCTGGGGACACCAGCGTCAGCTGCCCCAGGCCTCTGTGCAACCCCCACAGTCGCACCCTTTTGCGGTAACCCACATTACTGGGCACTCGGGAAGGCTGTTTTCTTTCCCAGGAGCCCTAAGGACAGATGCCGCAGGGCTTGGAGTTGTACCCCGTAGC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:130979020\|130979246	hsa-miR-570-5p	0	0	1
chr12:130979020\|130979246	hsa-miR-570-3p	0	0	1
chr12:130979020\|130979246	hsa-miR-631	0	1	1
chr12:130979020\|130979246	hsa-miR-635	0	1	1
chr12:130979020\|130979246	hsa-miR-661	0	1	1
chr12:130979020\|130979246	hsa-miR-1296-5p	0	0	1
chr12:130979020\|130979246	hsa-miR-1296-3p	0	0	1
chr12:130979020\|130979246	hsa-miR-887-5p	0	0	1
chr12:130979020\|130979246	hsa-miR-887-3p	0	0	1
chr12:130979020\|130979246	hsa-miR-491-5p	0	0	1
chr12:130979020\|130979246	hsa-miR-486-3p	0	1	1
chr12:130979020\|130979246	hsa-miR-299-3p	0	1	1
chr12:130979020\|130979246	hsa-miR-1224-3p	0	0	1
chr12:130979020\|130979246	hsa-miR-409-5p	0	0	1
chr12:130979020\|130979246	hsa-miR-516a-3p	0	0	1
chr12:130979020\|130979246	hsa-miR-220b	0	0	1
chr12:130979020\|130979246	hsa-miR-138	0	0	1
chr12:130979020\|130979246	hsa-miR-3153	0	1	0
chr12:130979020\|130979246	hsa-miR-4297	0	1	0
chr12:130979020\|130979246	hsa-miR-4734	1	0	0
chr12:130979020\|130979246	hsa-miR-138-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-593-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-6842-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-6759-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-433-3p	1	0	0
chr12:130979020\|130979246	hsa-miR-1292-5p	1	0	0
chr12:130979020\|130979246	hsa-miR-6793-5p	1	1	0
chr12:130979020\|130979246	hsa-miR-6796-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-23a-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-6765-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-3691-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-6852-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-5088-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-204-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-7154-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-146b-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-3189-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-3158-3p	1	0	0
chr12:130979020\|130979246	hsa-miR-4772-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-2277-5p	1	0	0
chr12:130979020\|130979246	hsa-miR-3173-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-1228-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-6803-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-6774-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-6780a-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-6739-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-498-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-4700-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-4646-5p	0	1	0
chr12:130979020\|130979246	hsa-miR-3085-3p	0	1	0
chr12:130979020\|130979246	hsa-miR-6733-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:130979020\|130979246
ORF Type	ORF1
Protein Length	32
Nucleotide Length	99
Protein Sequence	MRWVWVVPARSGDTSVSCPRPLCNPHSRTLLR
Nucleotide Sequence	ATGAGGTGGGTGTGGGTGGTGCCAGCCAGGTCTGGGGACACCAGCGTCAGCTGCCCCAGGCCTCTGTGCAACCCCCACAGTCGCACCCTTTTGCGGTAA

CircID	chr12:130979020\|130979246
ORF Type	ORF2
Protein Length	51
Nucleotide Length	156
Protein Sequence	MGTPASAAPGLCATPTVAPFCGNPHYWALGKAVFFPRSPKDRCRRAWSCTP
Nucleotide Sequence	CTGGGGACACCAGCGTCAGCTGCCCCAGGCCTCTGTGCAACCCCCACAGTCGCACCCTTTTGCGGTAACCCACATTACTGGGCACTCGGGAAGGCTGTTTTCTTTCCCAGGAGCCCTAAGGACAGATGCCGCAGGGCTTGGAGTTGTACCCCGTAG

CircID	chr12:130979020\|130979246
ORF Type	ORF3
Protein Length	46
Nucleotide Length	138
Protein Sequence	MPQASVQPPQSHPFAVTHITGHSGRLFSFPGALRTDAAGLGVVPRS
Nucleotide Sequence	CTGCCCCAGGCCTCTGTGCAACCCCCACAGTCGCACCCTTTTGCGGTAACCCACATTACTGGGCACTCGGGAAGGCTGTTTTCTTTCCCAGGAGCCCTAAGGACAGATGCCGCAGGGCTTGGAGTTGTACCCCGTAGC

CircID	chr12:130979020\|130979246
ORF Type	ORF4
Protein Length	39
Nucleotide Length	117
Protein Sequence	MWGLHRGLGQLTLVSPDLAGTTHTHLMNGLPATPALGAE
Nucleotide Sequence	CTGTGGGGGTTGCACAGAGGCCTGGGGCAGCTGACGCTGGTGTCCCCAGACCTGGCTGGCACCACCCACACCCACCTCATGAACGGGCTTCCTGCAACACCTGCCTTGGGCGCTGAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information