CircRNA Information

General Information
circRNA Basic Information
CircID chr12:132727417|132728138
Strand -
CircType exon
Host Gene ENSG00000176915.13;
Algorism CIRI2;
Sequence CTTCCTTTCACCGCGGGACTGGGCCAACTCTGTCTGTCCGAGGGTGAGTAGCACAGGACAGCACTCTTCCATCTGTGCACGGCCGGGAACTGATGGGGGTCGACGTCTGCACATTCAAGAGCGGCCAAAACATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:132727417|132728138 hsa-miR-328-5p 0 0 1
chr12:132727417|132728138 hsa-miR-328-3p 0 0 1
chr12:132727417|132728138 hsa-miR-488-5p 0 0 1
chr12:132727417|132728138 hsa-miR-488-3p 0 0 1
chr12:132727417|132728138 hsa-miR-551a 0 0 1
chr12:132727417|132728138 hsa-miR-551b-5p 0 0 1
chr12:132727417|132728138 hsa-miR-551b-3p 0 0 1
chr12:132727417|132728138 hsa-miR-571 0 1 1
chr12:132727417|132728138 hsa-miR-626 0 0 1
chr12:132727417|132728138 hsa-miR-1324 0 0 1
chr12:132727417|132728138 hsa-miR-512-3p 0 1 1
chr12:132727417|132728138 hsa-miR-7 0 0 1
chr12:132727417|132728138 hsa-miR-1973 0 1 0
chr12:132727417|132728138 hsa-miR-3917 0 1 0
chr12:132727417|132728138 hsa-miR-6077 0 1 0
chr12:132727417|132728138 hsa-miR-7974 1 0 0
chr12:132727417|132728138 hsa-miR-4665-3p 1 0 0
chr12:132727417|132728138 hsa-miR-1273h-3p 1 1 0
chr12:132727417|132728138 hsa-miR-24-3p 0 1 0
chr12:132727417|132728138 hsa-miR-6762-3p 1 0 0
chr12:132727417|132728138 hsa-miR-941 0 1 0
chr12:132727417|132728138 hsa-miR-4715-5p 0 1 0
chr12:132727417|132728138 hsa-miR-6743-3p 1 1 0
chr12:132727417|132728138 hsa-miR-584-3p 0 1 0
chr12:132727417|132728138 hsa-miR-6859-3p 0 1 0
chr12:132727417|132728138 hsa-miR-193b-3p 1 0 0
chr12:132727417|132728138 hsa-miR-10392-3p 1 0 0
chr12:132727417|132728138 hsa-miR-3130-5p 0 1 0
chr12:132727417|132728138 hsa-miR-3085-3p 1 0 0
chr12:132727417|132728138 hsa-miR-6744-3p 1 0 0
chr12:132727417|132728138 hsa-miR-6876-3p 0 1 0
chr12:132727417|132728138 hsa-miR-6737-3p 0 1 0
chr12:132727417|132728138 hsa-miR-7157-3p 0 1 0
chr12:132727417|132728138 hsa-miR-217-3p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:132727417|132728138
ORF Type ORF1
Protein Length 42
Nucleotide Length 126
Protein Sequence MAALECADVDPHQFPAVHRWKSAVLCYSPSDRQSWPSPAVKG
Nucleotide Sequence TTGGCCGCTCTTGAATGTGCAGACGTCGACCCCCATCAGTTCCCGGCCGTGCACAGATGGAAGAGTGCTGTCCTGTGCTACTCACCCTCGGACAGACAGAGTTGGCCCAGTCCCGCGGTGAAAGGA

CircID chr12:132727417|132728138
ORF Type ORF2
Protein Length 41
Nucleotide Length 126
Protein Sequence MFWPLLNVQTSTPISSRPCTDGRVLSCATHPRTDRVGPVPR
Nucleotide Sequence ATGTTTTGGCCGCTCTTGAATGTGCAGACGTCGACCCCCATCAGTTCCCGGCCGTGCACAGATGGAAGAGTGCTGTCCTGTGCTACTCACCCTCGGACAGACAGAGTTGGCCCAGTCCCGCGGTGA

CircID chr12:132727417|132728138
ORF Type ORF3
Protein Length 38
Nucleotide Length 114
Protein Sequence MCRRRPPSVPGRAQMEECCPVLLTLGQTELAQSRGERK
Nucleotide Sequence ATGTGCAGACGTCGACCCCCATCAGTTCCCGGCCGTGCACAGATGGAAGAGTGCTGTCCTGTGCTACTCACCCTCGGACAGACAGAGTTGGCCCAGTCCCGCGGTGAAAGGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites