CircRNA Information

General Information
circRNA Basic Information
CircID chr12:132950473|132950677
Strand +
CircType exon
Host Gene
Algorism CIRI2;
Sequence CTGTGTATCTGTGTGTGTCTGTGAGTGTATGTGCGATGTACTCAGGGTGTCTGTGTATGCCTGTCTTTGTGTGTGTGTACGTGTGCATCAGTGTGTGTGCACGTCTGTGTGTGATGTACGGGTGTATTAGTGTGTCTGAGTGTGTGTGCGTCTGTGTGTGTGCATGTCTGCGCATGTCTGTACGTGTGCGTCTGTGTGTGCATGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:132950473|132950677 hsa-miR-99a-5p 0 0 1
chr12:132950473|132950677 hsa-miR-99a-3p 0 0 1
chr12:132950473|132950677 hsa-miR-100-5p 0 0 1
chr12:132950473|132950677 hsa-miR-100-3p 0 0 1
chr12:132950473|132950677 hsa-miR-99b-5p 0 0 1
chr12:132950473|132950677 hsa-miR-99b-3p 0 0 1
chr12:132950473|132950677 hsa-miR-377-5p 0 0 1
chr12:132950473|132950677 hsa-miR-377-3p 0 0 1
chr12:132950473|132950677 hsa-miR-603 0 1 1
chr12:132950473|132950677 hsa-miR-655-5p 0 0 1
chr12:132950473|132950677 hsa-miR-655-3p 0 0 1
chr12:132950473|132950677 hsa-miR-1324 0 0 1
chr12:132950473|132950677 hsa-miR-125a-5p 0 0 1
chr12:132950473|132950677 hsa-miR-362-3p 0 0 1
chr12:132950473|132950677 hsa-miR-125b 0 0 1
chr12:132950473|132950677 hsa-miR-329 0 0 1
chr12:132950473|132950677 hsa-miR-499-3p 0 0 1
chr12:132950473|132950677 hsa-miR-466 1 1 0
chr12:132950473|132950677 hsa-miR-3166 0 1 0
chr12:132950473|132950677 hsa-miR-3941 0 1 0
chr12:132950473|132950677 hsa-miR-5683 0 1 0
chr12:132950473|132950677 hsa-miR-5689 0 1 0
chr12:132950473|132950677 hsa-miR-6863 0 1 0
chr12:132950473|132950677 hsa-miR-8485 1 1 0
chr12:132950473|132950677 hsa-miR-2467-3p 1 0 0
chr12:132950473|132950677 hsa-miR-6767-5p 1 1 0
chr12:132950473|132950677 hsa-miR-4524a-3p 0 1 0
chr12:132950473|132950677 hsa-miR-3620-3p 0 1 0
chr12:132950473|132950677 hsa-miR-3177-5p 0 1 0
chr12:132950473|132950677 hsa-miR-574-3p 1 1 0
chr12:132950473|132950677 hsa-miR-499a-3p 0 1 0
chr12:132950473|132950677 hsa-miR-4789-3p 0 1 0
chr12:132950473|132950677 hsa-miR-5583-5p 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:132950473|132950677
ORF Type ORF1
Protein Length 33
Nucleotide Length 102
Protein Sequence MCDVLRVSVYACLCVCVRVHQCVCTSVCDVRVY
Nucleotide Sequence ATGTGCGATGTACTCAGGGTGTCTGTGTATGCCTGTCTTTGTGTGTGTGTACGTGTGCATCAGTGTGTGTGCACGTCTGTGTGTGATGTACGGGTGTATTAG

CircID chr12:132950473|132950677
ORF Type ORF2
Protein Length 65
Nucleotide Length 195
Protein Sequence MCVSVSVCAMYSGCLCMPVFVCVYVCISVCARLCVMYGCISVSECVCVCVCACLRMSVRVRLCVH
Nucleotide Sequence CTGTGTGTGTCTGTGAGTGTATGTGCGATGTACTCAGGGTGTCTGTGTATGCCTGTCTTTGTGTGTGTGTACGTGTGCATCAGTGTGTGTGCACGTCTGTGTGTGATGTACGGGTGTATTAGTGTGTCTGAGTGTGTGTGCGTCTGTGTGTGTGCATGTCTGCGCATGTCTGTACGTGTGCGTCTGTGTGTGCAT

CircID chr12:132950473|132950677
ORF Type ORF3
Protein Length 58
Nucleotide Length 174
Protein Sequence MRRHAHTQTHTHSDTLIHPYITHRRAHTLMHTYTHTKTGIHRHPEYIAHTLTDTHRYT
Nucleotide Sequence ATGCGCAGACATGCACACACACAGACGCACACACACTCAGACACACTAATACACCCGTACATCACACACAGACGTGCACACACACTGATGCACACGTACACACACACAAAGACAGGCATACACAGACACCCTGAGTACATCGCACATACACTCACAGACACACACAGATACACA

CircID chr12:132950473|132950677
ORF Type ORF4
Protein Length 53
Nucleotide Length 162
Protein Sequence MHTQTHTYRHAQTCTHTDAHTLRHTNTPVHHTQTCTHTDAHVHTHKDRHTQTP
Nucleotide Sequence ATGCACACACAGACGCACACGTACAGACATGCGCAGACATGCACACACACAGACGCACACACACTCAGACACACTAATACACCCGTACATCACACACAGACGTGCACACACACTGATGCACACGTACACACACACAAAGACAGGCATACACAGACACCCTGA

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites