CircRNA Information

General Information
circRNA Basic Information
CircID chr12:14774831|14774976
Strand +
CircType exon
Host Gene ENSG00000246705.4;
Algorism CIRI2;
Sequence CTCCCCGCTAGATGTCACCGGCCCTCCATGACATCCAGCACATTCAAAAGCATTGCGGGACGACCATGAAAAGGGCCTTTGCTGGGGGAGCCAGCTCCCTGAGGGCGGCGTCAGGGTCATTTGCTCTTCGTCTTCTGACTCTCCGT
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:14774831|14774976 hsa-miR-149-5p 0 0 1
chr12:14774831|14774976 hsa-miR-149-3p 0 0 1
chr12:14774831|14774976 hsa-miR-489-5p 0 0 1
chr12:14774831|14774976 hsa-miR-489-3p 0 0 1
chr12:14774831|14774976 hsa-miR-504-5p 0 0 1
chr12:14774831|14774976 hsa-miR-504-3p 0 0 1
chr12:14774831|14774976 hsa-miR-545-5p 0 0 1
chr12:14774831|14774976 hsa-miR-545-3p 0 0 1
chr12:14774831|14774976 hsa-miR-920 0 0 1
chr12:14774831|14774976 hsa-miR-1287-5p 0 0 1
chr12:14774831|14774976 hsa-miR-1287-3p 0 0 1
chr12:14774831|14774976 hsa-miR-1266-5p 0 0 1
chr12:14774831|14774976 hsa-miR-1266-3p 0 0 1
chr12:14774831|14774976 hsa-miR-361-3p 0 0 1
chr12:14774831|14774976 hsa-miR-490-5p 0 0 1
chr12:14774831|14774976 hsa-miR-4300 0 1 0
chr12:14774831|14774976 hsa-miR-4487 0 1 0
chr12:14774831|14774976 hsa-miR-4785 1 0 0
chr12:14774831|14774976 hsa-miR-5739 0 1 0
chr12:14774831|14774976 hsa-miR-9899 1 0 0
chr12:14774831|14774976 hsa-miR-12128 0 1 0
chr12:14774831|14774976 hsa-miR-6515-5p 0 1 0
chr12:14774831|14774976 hsa-miR-4709-3p 0 1 0
chr12:14774831|14774976 hsa-miR-4725-5p 0 1 0
chr12:14774831|14774976 hsa-miR-185-3p 0 1 0
chr12:14774831|14774976 hsa-miR-3691-5p 0 1 0
chr12:14774831|14774976 hsa-miR-4732-3p 0 1 0
chr12:14774831|14774976 hsa-miR-4632-3p 0 1 0
chr12:14774831|14774976 hsa-miR-335-3p 0 1 0
chr12:14774831|14774976 hsa-miR-6768-3p 0 1 0
chr12:14774831|14774976 hsa-miR-431-3p 1 1 0
chr12:14774831|14774976 hsa-miR-1343-5p 1 0 0
chr12:14774831|14774976 hsa-miR-5001-5p 0 1 0
chr12:14774831|14774976 hsa-miR-6726-5p 0 1 0
chr12:14774831|14774976 hsa-miR-6754-5p 0 1 0
chr12:14774831|14774976 hsa-miR-6889-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:14774831|14774976
ORF Type ORF1
Protein Length 31
Nucleotide Length 93
Protein Sequence MRDDHEKGLCWGSQLPEGGVRVICSSSSDSP
Nucleotide Sequence TTGCGGGACGACCATGAAAAGGGCCTTTGCTGGGGGAGCCAGCTCCCTGAGGGCGGCGTCAGGGTCATTTGCTCTTCGTCTTCTGACTCTCCG

CircID chr12:14774831|14774976
ORF Type ORF2
Protein Length 45
Nucleotide Length 135
Protein Sequence MSPALHDIQHIQKHCGTTMKRAFAGGASSLRAASGSFALRLLTLR
Nucleotide Sequence ATGTCACCGGCCCTCCATGACATCCAGCACATTCAAAAGCATTGCGGGACGACCATGAAAAGGGCCTTTGCTGGGGGAGCCAGCTCCCTGAGGGCGGCGTCAGGGTCATTTGCTCTTCGTCTTCTGACTCTCCGT

CircID chr12:14774831|14774976
ORF Type ORF3
Protein Length 40
Nucleotide Length 120
Protein Sequence MTLTPPSGSWLPQQRPFSWSSRNAFECAGCHGGPVTSSGE
Nucleotide Sequence ATGACCCTGACGCCGCCCTCAGGGAGCTGGCTCCCCCAGCAAAGGCCCTTTTCATGGTCGTCCCGCAATGCTTTTGAATGTGCTGGATGTCATGGAGGGCCGGTGACATCTAGCGGGGAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites