CircRNA Information

General Information
circRNA Basic Information
CircID chr12:14942446|14942551
Strand +
CircType exon
Host Gene ENSG00000111348.7;
Algorism CIRI2;
Sequence CTGTCGATTAAGAAGGAGTGGACAGAATGAATGCATCCACCCCTTTCCCCACCCTTGCCACCTGGAAGAATTCTCTCAGGCGTGTTCAGCACCCTGTCCCTCCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:14942446|14942551 hsa-miR-31-5p 0 0 1
chr12:14942446|14942551 hsa-miR-31-3p 0 0 1
chr12:14942446|14942551 hsa-miR-586 0 0 1
chr12:14942446|14942551 hsa-miR-608 1 0 1
chr12:14942446|14942551 hsa-miR-1298-5p 0 0 1
chr12:14942446|14942551 hsa-miR-1298-3p 0 0 1
chr12:14942446|14942551 hsa-miR-765 0 1 1
chr12:14942446|14942551 hsa-miR-1237-5p 0 0 1
chr12:14942446|14942551 hsa-miR-1237-3p 0 0 1
chr12:14942446|14942551 hsa-miR-1248 0 0 1
chr12:14942446|14942551 hsa-miR-491-5p 1 0 1
chr12:14942446|14942551 hsa-miR-483-3p 0 0 1
chr12:14942446|14942551 hsa-miR-664 0 0 1
chr12:14942446|14942551 hsa-miR-614 1 0 0
chr12:14942446|14942551 hsa-miR-762 1 0 0
chr12:14942446|14942551 hsa-miR-940 1 0 0
chr12:14942446|14942551 hsa-miR-1293 1 0 0
chr12:14942446|14942551 hsa-miR-2110 1 0 0
chr12:14942446|14942551 hsa-miR-3141 1 0 0
chr12:14942446|14942551 hsa-miR-3153 0 1 0
chr12:14942446|14942551 hsa-miR-3165 0 1 0
chr12:14942446|14942551 hsa-miR-4257 1 0 0
chr12:14942446|14942551 hsa-miR-4271 1 0 0
chr12:14942446|14942551 hsa-miR-3936 1 1 0
chr12:14942446|14942551 hsa-miR-2392 1 0 0
chr12:14942446|14942551 hsa-miR-4651 1 1 0
chr12:14942446|14942551 hsa-miR-4689 1 0 0
chr12:14942446|14942551 hsa-miR-5787 1 0 0
chr12:14942446|14942551 hsa-miR-6069 1 0 0
chr12:14942446|14942551 hsa-miR-6086 1 0 0
chr12:14942446|14942551 hsa-miR-6132 1 0 0
chr12:14942446|14942551 hsa-miR-6133 1 0 0
chr12:14942446|14942551 hsa-miR-6745 1 0 0
chr12:14942446|14942551 hsa-miR-7150 1 0 0
chr12:14942446|14942551 hsa-miR-22-5p 0 1 0
chr12:14942446|14942551 hsa-miR-4433b-3p 1 0 0
chr12:14942446|14942551 hsa-miR-92a-2-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6747-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6809-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4433a-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6857-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6510-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6757-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4695-5p 1 0 0
chr12:14942446|14942551 hsa-miR-3622b-5p 1 0 0
chr12:14942446|14942551 hsa-miR-7845-5p 0 1 0
chr12:14942446|14942551 hsa-miR-6783-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6742-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6716-5p 1 0 0
chr12:14942446|14942551 hsa-miR-3151-5p 1 0 0
chr12:14942446|14942551 hsa-miR-1292-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6748-5p 1 0 0
chr12:14942446|14942551 hsa-miR-3126-5p 0 1 0
chr12:14942446|14942551 hsa-miR-6881-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6782-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6810-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6786-5p 1 0 0
chr12:14942446|14942551 hsa-miR-30c-2-3p 1 0 0
chr12:14942446|14942551 hsa-miR-885-3p 1 0 0
chr12:14942446|14942551 hsa-miR-1908-5p 1 0 0
chr12:14942446|14942551 hsa-miR-296-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6823-5p 1 0 0
chr12:14942446|14942551 hsa-miR-92b-5p 1 0 0
chr12:14942446|14942551 hsa-miR-149-3p 1 1 0
chr12:14942446|14942551 hsa-miR-3681-5p 0 1 0
chr12:14942446|14942551 hsa-miR-625-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6761-5p 0 1 0
chr12:14942446|14942551 hsa-miR-1207-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4763-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6769b-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6812-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6816-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6865-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6870-5p 1 0 0
chr12:14942446|14942551 hsa-miR-1343-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6743-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6756-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6769a-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6815-5p 0 1 0
chr12:14942446|14942551 hsa-miR-6819-5p 1 0 0
chr12:14942446|14942551 hsa-miR-10401-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6722-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6763-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6779-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6797-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6808-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4728-5p 1 0 0
chr12:14942446|14942551 hsa-miR-5196-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6780b-5p 1 0 0
chr12:14942446|14942551 hsa-miR-1909-3p 1 0 0
chr12:14942446|14942551 hsa-miR-328-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4649-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4725-3p 1 0 0
chr12:14942446|14942551 hsa-miR-4745-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6729-5p 1 0 0
chr12:14942446|14942551 hsa-miR-675-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6795-5p 1 1 0
chr12:14942446|14942551 hsa-miR-6883-5p 1 0 0
chr12:14942446|14942551 hsa-miR-30c-1-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6731-5p 1 0 0
chr12:14942446|14942551 hsa-miR-6758-5p 1 0 0
chr12:14942446|14942551 hsa-miR-4716-3p 1 0 0
chr12:14942446|14942551 hsa-miR-6785-5p 0 1 0
chr12:14942446|14942551 hsa-miR-10395-3p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:14942446|14942551
ORF Type ORF1
Protein Length 25
Nucleotide Length 75
Protein Sequence MHPPLSPPLPPGRILSGVFSTLSLL
Nucleotide Sequence ATGCATCCACCCCTTTCCCCACCCTTGCCACCTGGAAGAATTCTCTCAGGCGTGTTCAGCACCCTGTCCCTCCTC
CircID chr12:14942446|14942551
ORF Type ORF2
Protein Length 26
Nucleotide Length 78
Protein Sequence MNASTPFPTLATWKNSLRRVQHPVPP
Nucleotide Sequence ATGAATGCATCCACCCCTTTCCCCACCCTTGCCACCTGGAAGAATTCTCTCAGGCGTGTTCAGCACCCTGTCCCTCCT
CircID chr12:14942446|14942551
ORF Type ORF3
Protein Length 29
Nucleotide Length 87
Protein Sequence MNTPERILPGGKGGERGGCIHSVHSFLID
Nucleotide Sequence CTGAACACGCCTGAGAGAATTCTTCCAGGTGGCAAGGGTGGGGAAAGGGGTGGATGCATTCATTCTGTCCACTCCTTCTTAATCGAC
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab