CircNet

General Information

circRNA Basic Information

CircID	chr12:15549094\|15565628
Strand	+
CircType	exon
Host Gene	ENSG00000151490.13;
Algorism	CIRI2;DCC;
Sequence	GAACCAGTTGCTGTTTCTTCCCATGTCGTGACCATCTCCAGCCTTCTTCCTGCCACTGCCTACAATTGTAGTGTCACCAGCTTTAGCCATGACAGCCCCAGTGTCCCTACGTTCATAGCCGTCTCAACAATGGTTACAGAGATGAATCCCAATGTGGTAGTGATCTCCGTGCTGGCCATCCTTAGCACACTTTTAATTGGACTGTTGCTTGTTACCCTCATTATTCTTAGGAAAAAGCATCTGCAGATGGCTAGGGAGTGTGGAGCTGGTACATTTGTCAATTTTGCATCCTTAGAGAGGGATGGAAAGCTTCCATACAACTGGCGTAGGAGTATATTTGCTTTCTTAACCCTGCTACCCTCATGTCTTTGGACTGATTATCTTTTGGCATTTTATATTAATCCTTGTTTGGCAAATGGGAAGTATAAAGTGCAGATATGTTCATGCAATCTAGTAGAGTTTTAAAAAATGAATCTGAAATTATTATTATCTTCTCATGTAAGGAAAAGTAAACAAACCTGATATGTGTTTAATGAAAATTAAATAAAACTGAGGTACCTGATGTAATTATTTAAAGCTGTTCAAGTTTAATTATTATGTTAATCAATTCTTCTGCCCAGATAAATTTGTCTTTTCTTTTTTAATTATCAGGAGTAAAAATGGTTTAAAGAAGAGGAAACTGACAAA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:15549094\|15565628	hsa-miR-28-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:15549094\|15565628
ORF Type	ORF1
Protein Length	112
Nucleotide Length	336
Protein Sequence	MVTEMNPNVVVISVLAILSTLLIGLLLVTLIILRKKHLQMARECGAGTFVNFASLERDGKLPYNWRRSIFAFLTLLPSCLWTDYLLAFYINPCLANGKYKVQICSCNLVEF*
Nucleotide Sequence	ATGGTTACAGAGATGAATCCCAATGTGGTAGTGATCTCCGTGCTGGCCATCCTTAGCACACTTTTAATTGGACTGTTGCTTGTTACCCTCATTATTCTTAGGAAAAAGCATCTGCAGATGGCTAGGGAGTGTGGAGCTGGTACATTTGTCAATTTTGCATCCTTAGAGAGGGATGGAAAGCTTCCATACAACTGGCGTAGGAGTATATTTGCTTTCTTAACCCTGCTACCCTCATGTCTTTGGACTGATTATCTTTTGGCATTTTATATTAATCCTTGTTTGGCAAATGGGAAGTATAAAGTGCAGATATGTTCATGCAATCTAGTAGAGTTTTAA

CircID	chr12:15549094\|15565628
ORF Type	ORF2
Protein Length	54
Nucleotide Length	162
Protein Sequence	MRVTSNSPIKSVLRMASTEITTTLGFISVTIVETAMNVGTLGLSWLKLVTLQL*
Nucleotide Sequence	ATGAGGGTAACAAGCAACAGTCCAATTAAAAGTGTGCTAAGGATGGCCAGCACGGAGATCACTACCACATTGGGATTCATCTCTGTAACCATTGTTGAGACGGCTATGAACGTAGGGACACTGGGGCTGTCATGGCTAAAGCTGGTGACACTACAATTGTAG

CircID	chr12:15549094\|15565628
ORF Type	ORF3
Protein Length	38
Nucleotide Length	114
Protein Sequence	MPKDNQSKDMRVAGLRKQIYSYASCMEAFHPSLRMQN*
Nucleotide Sequence	ATGCCAAAAGATAATCAGTCCAAAGACATGAGGGTAGCAGGGTTAAGAAAGCAAATATACTCCTACGCCAGTTGTATGGAAGCTTTCCATCCCTCTCTAAGGATGCAAAATTGA

CircID	chr12:15549094\|15565628
ORF Type	ORF4
Protein Length	30
Nucleotide Length	90
Protein Sequence	MAKAGDTTIVGSGRKKAGDGHDMGRNSNWF
Nucleotide Sequence	ATGGCTAAAGCTGGTGACACTACAATTGTAGGCAGTGGCAGGAAGAAGGCTGGAGATGGTCACGACATGGGAAGAAACAGCAACTGGTTC

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:15549094\|15565628	U2AF2	1	0	0
chr12:15549094\|15565628	MOV10	1	0	0
chr12:15549094\|15565628	FUS	0	2	1
chr12:15549094\|15565628	HNRNPA1	5	2	0
chr12:15549094\|15565628	CSTF2T	0	1	0
chr12:15549094\|15565628	CSTF2	3	2	0
chr12:15549094\|15565628	TARDBP	3	3	0
chr12:15549094\|15565628	WDR33	1	0	0
chr12:15549094\|15565628	FIP1L1	1	0	0
chr12:15549094\|15565628	PTBP1	0	4	0
chr12:15549094\|15565628	HNRNPC	1	1	0
chr12:15549094\|15565628	ELAVL1	2	1	0

CircRNA Information