CircNet

General Information

circRNA Basic Information

CircID	chr12:19251827\|19251967
Strand	+
CircType	exon
Host Gene
Algorism	CIRI2;
Sequence	CCTGGGAGGTAGCTGGCTCACTGTTAGGTCCTGACCATTGTCTTGGCACAACGGAGGAGTGGACTGCTCAGGACCACAGGAAGGGCAGGGAAGGGAAGACAATGATTCTAGCCTTTTCTCAATTCTACCAAAGTTTGTCCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:19251827\|19251967	hsa-miR-204-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-204-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-211-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-211-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-212-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-212-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-132-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-132-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-379-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-379-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-511-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-511-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-539-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-539-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-580-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-580-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-623	0	0	1
chr12:19251827\|19251967	hsa-miR-938	0	0	1
chr12:19251827\|19251967	hsa-miR-1227-5p	0	0	1
chr12:19251827\|19251967	hsa-miR-1227-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-1200	0	1	1
chr12:19251827\|19251967	hsa-miR-483-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-455-3p	0	0	1
chr12:19251827\|19251967	hsa-miR-1274a	0	0	1
chr12:19251827\|19251967	hsa-miR-9	0	0	1
chr12:19251827\|19251967	hsa-miR-1300	0	0	1
chr12:19251827\|19251967	hsa-miR-4274	0	1	0
chr12:19251827\|19251967	hsa-miR-203a-5p	0	1	0
chr12:19251827\|19251967	hsa-miR-18a-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-6845-3p	1	0	0
chr12:19251827\|19251967	hsa-miR-6858-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-6809-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-6830-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-4446-5p	0	1	0
chr12:19251827\|19251967	hsa-miR-6886-3p	1	1	0
chr12:19251827\|19251967	hsa-miR-5197-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-7152-5p	0	1	0
chr12:19251827\|19251967	hsa-miR-6734-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-4685-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-4755-5p	0	1	0
chr12:19251827\|19251967	hsa-miR-6831-5p	0	1	0
chr12:19251827\|19251967	hsa-miR-6783-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-5006-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-6766-3p	0	1	0
chr12:19251827\|19251967	hsa-miR-203b-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:19251827\|19251967
ORF Type	ORF1
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSWHNGGVDCSGPQEGQGREDNDSSLFSILPKFV
Nucleotide Sequence	TTGTCTTGGCACAACGGAGGAGTGGACTGCTCAGGACCACAGGAAGGGCAGGGAAGGGAAGACAATGATTCTAGCCTTTTCTCAATTCTACCAAAGTTTGTC

CircID	chr12:19251827\|19251967
ORF Type	ORF2
Protein Length	40
Nucleotide Length	120
Protein Sequence	MLGPDHCLGTTEEWTAQDHRKGREGKTMILAFSQFYQSLS
Nucleotide Sequence	CTGTTAGGTCCTGACCATTGTCTTGGCACAACGGAGGAGTGGACTGCTCAGGACCACAGGAAGGGCAGGGAAGGGAAGACAATGATTCTAGCCTTTTCTCAATTCTACCAAAGTTTGTCC

CircID	chr12:19251827\|19251967
ORF Type	ORF3
Protein Length	34
Nucleotide Length	102
Protein Sequence	MSSLPCPSCGPEQSTPPLCQDNGQDLTVSQLPPR
Nucleotide Sequence	TTGTCTTCCCTTCCCTGCCCTTCCTGTGGTCCTGAGCAGTCCACTCCTCCGTTGTGCCAAGACAATGGTCAGGACCTAACAGTGAGCCAGCTACCTCCCAGG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information