CircNet

General Information

circRNA Basic Information

CircID	chr12:19274516\|19322667
Strand	+
CircType	exon
Host Gene	ENSG00000052126.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	CCAGAGGAGCTTACGCTGCTGCTAATAAAGCTGAGACGGCAGCAAGCCGAACTGAGTAGTATCCGGGAGCATACGTTAGCACAGCTCATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:19274516\|19322667	hsa-miR-134-3p	0	1	1
chr12:19274516\|19322667	hsa-miR-148a-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:19274516\|19322667
ORF Type	ORF1
Protein Length	88
Nucleotide Length	264
Protein Sequence	MQLKLEAHSPKAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMHADNPAAIQTVVLQRDDLQNGLLSTCRELSRATA
Nucleotide Sequence	ATGCAGCTAAAGCTTGAGGCCCACAGCCCAAAGGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAGAGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGATAGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCC

CircID	chr12:19274516\|19322667
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MQITQQPFRQWCYKGMIYKMDCLVRVENFLEPL
Nucleotide Sequence	ATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGACTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTG

CircID	chr12:19274516\|19322667
ORF Type	ORF3
Protein Length	31
Nucleotide Length	93
Protein Sequence	MAAGLSACISISWLADSKACSSVYFSLWSC*
Nucleotide Sequence	ATGGCTGCTGGGTTATCTGCATGCATTTCTATCTCTTGGCTGGCTGATAGCAAAGCTTGCTCAAGCGTGTATTTCTCCTTGTGGAGTTGCTGA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:19274516\|19322667	ELAVL1	1	4	1
chr12:19274516\|19322667	PRPF8	0	2	0
chr12:19274516\|19322667	UPF1	0	2	0
chr12:19274516\|19322667	TAF15	1	0	0
chr12:19274516\|19322667	FMR1	0	1	3
chr12:19274516\|19322667	FUS	1	0	0
chr12:19274516\|19322667	NOP58	0	1	1
chr12:19274516\|19322667	U2AF2	5	7	0
chr12:19274516\|19322667	DDX54	1	0	5
chr12:19274516\|19322667	HNRNPK	1	0	0
chr12:19274516\|19322667	PTBP1	0	2	0
chr12:19274516\|19322667	HNRNPC	1	21	0
chr12:19274516\|19322667	ZNF184	1	0	0
chr12:19274516\|19322667	AUH	1	0	0
chr12:19274516\|19322667	HNRNPA1	0	2	0
chr12:19274516\|19322667	LIN28B	0	0	1
chr12:19274516\|19322667	IGF2BP3	0	0	1
chr12:19274516\|19322667	IGF2BP2	0	1	0
chr12:19274516\|19322667	TARDBP	0	1	0
chr12:19274516\|19322667	BUD13	1	0	0
chr12:19274516\|19322667	RBFOX2	0	1	0
chr12:19274516\|19322667	CSTF2T	0	0	1
chr12:19274516\|19322667	AGO2	0	0	1
chr12:19274516\|19322667	EWSR1	1	0	0
chr12:19274516\|19322667	EIF4A3	2	2	6
chr12:19274516\|19322667	FBL	1	1	0

CircRNA Information