CircNet

General Information

circRNA Basic Information

CircID	chr12:19336515\|19343434
Strand	+
CircType	exon
Host Gene	ENSG00000052126.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAATTGGAACGAGCATGGAGAGAATATGATAAGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:19336515\|19343434	hsa-miR-29a-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:19336515\|19343434
ORF Type	ORF1
Protein Length	49
Nucleotide Length	147
Protein Sequence	MQEQLDHLGEVQTESAGIQRAQIQKELWRIQDVMEGLSKHKQQRGTTEI
Nucleotide Sequence	ATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCAGACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAAGGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:19336515\|19343434	ELAVL1	1	10	1
chr12:19336515\|19343434	CPSF7	1	0	0
chr12:19336515\|19343434	CPSF1	0	2	0
chr12:19336515\|19343434	FUS	1	0	0
chr12:19336515\|19343434	NOP58	0	2	1
chr12:19336515\|19343434	U2AF2	5	3	0
chr12:19336515\|19343434	DDX54	0	0	4
chr12:19336515\|19343434	FIP1L1	0	1	0
chr12:19336515\|19343434	PTBP1	1	0	0
chr12:19336515\|19343434	HNRNPC	23	29	0
chr12:19336515\|19343434	ZC3H7B	0	1	0
chr12:19336515\|19343434	HNRNPA1	3	1	0
chr12:19336515\|19343434	LIN28B	0	2	0
chr12:19336515\|19343434	IGF2BP2	1	0	4
chr12:19336515\|19343434	TARDBP	0	1	0
chr12:19336515\|19343434	BUD13	0	0	1
chr12:19336515\|19343434	RBFOX2	1	0	0
chr12:19336515\|19343434	CSTF2T	0	0	1
chr12:19336515\|19343434	TIA1	0	1	0
chr12:19336515\|19343434	TIAL1	0	1	0
chr12:19336515\|19343434	EIF4A3	2	2	4
chr12:19336515\|19343434	FBL	0	0	1

CircRNA Information