CircNet

General Information

circRNA Basic Information

CircID	chr12:23755638\|23896024
Strand	-
CircType	exon
Host Gene	ENSG00000134532.15;
Algorism	CIRI2;find_circ;DCC;
Sequence	GATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:23755638\|23896024
ORF Type	ORF1
Protein Length	176
Nucleotide Length	528
Protein Sequence	MSSKRPASPYGEADGEVAMVTSRQKVEEEESDGLPAFHLPLHVSFPNKPHSEEFQPVSLLTQETCGHRTPTSQHNTMEVDGNKVMSSFAPHNSSTSPQKAEEGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNEPEETPSIEKLLSKDWKDKLLAMGSGNFGEIK
Nucleotide Sequence	ATGTCTTCCAAGCGACCAGCCTCTCCGTATGGGGAAGCAGATGGAGAGGTAGCCATGGTGACAAGCAGACAGAAAGTGGAAGAAGAGGAGAGTGACGGGCTCCCAGCCTTTCACCTTCCCTTGCATGTGAGTTTTCCCAACAAGCCTCACTCTGAGGAATTTCAGCCAGTTTCTCTGCTGACGCAAGAGACTTGTGGCCATAGGACTCCCACTTCTCAGCACAATACAATGGAAGTTGATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAGCTGATGTTGTTGACACCTTGAAGCAGAGGAAAATGGAAGAGCTCATCAAAAACGAGCCGGAAGAAACCCCCAGTATTGAAAAACTACTCTCAAAGGACTGGAAAGACAAGCTTCTTGCAATGGGATCGGGGAACTTTGGCGAAATAAAA

CircID	chr12:23755638\|23896024
ORF Type	ORF2
Protein Length	67
Nucleotide Length	201
Protein Sequence	MATSLLRQQRNWLKFLRVRLVGKTHMQGKVKGWEPVTLLFFHFLSACHHGYLSICFPIRRGWSLGRH
Nucleotide Sequence	ATGGCCACAAGTCTCTTGCGTCAGCAGAGAAACTGGCTGAAATTCCTCAGAGTGAGGCTTGTTGGGAAAACTCACATGCAAGGGAAGGTGAAAGGCTGGGAGCCCGTCACTCTCCTCTTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTGCTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACAT

CircID	chr12:23755638\|23896024
ORF Type	ORF3
Protein Length	47
Nucleotide Length	141
Protein Sequence	MAIKLCLHLPHTTHLPHLRRQKKVGDRVASPCLVQPWELLNGARAV*
Nucleotide Sequence	ATGGCAATAAAGTTATGTCTTCATTTGCCCCACACAACTCATCTACCTCACCTCAGAAGGCAGAAGAAGGTGGGCGACAGAGTGGCGAGTCCTTGTCTAGTACAGCCCTGGGAACTCCTGAACGGCGCAAGGGCAGTTTAG

CircID	chr12:23755638\|23896024
ORF Type	ORF4
Protein Length	45
Nucleotide Length	135
Protein Sequence	MSSSIFLCFKVSTTSAKLPLRRSGVPRAVLDKDSPLCRPPSSAF*
Nucleotide Sequence	ATGAGCTCTTCCATTTTCCTCTGCTTCAAGGTGTCAACAACATCAGCTAAACTGCCCTTGCGCCGTTCAGGAGTTCCCAGGGCTGTACTAGACAAGGACTCGCCACTCTGTCGCCCACCTTCTTCTGCCTTCTGA

CircID	chr12:23755638\|23896024
ORF Type	ORF5
Protein Length	76
Nucleotide Length	228
Protein Sequence	LYCAEKWESYGHKSLASAEKLAEIPQSEACWENSHAREGERLGARHSPLLPLSVCLSPWLPLHLLPHTERLVAWKT
Nucleotide Sequence	TTGTATTGTGCTGAGAAGTGGGAGTCCTATGGCCACAAGTCTCTTGCGTCAGCAGAGAAACTGGCTGAAATTCCTCAGAGTGAGGCTTGTTGGGAAAACTCACATGCAAGGGAAGGTGAAAGGCTGGGAGCCCGTCACTCTCCTCTTCTTCCACTTTCTGTCTGCTTGTCACCATGGCTACCTCTCCATCTGCTTCCCCATACGGAGAGGCTGGTCGCTTGGAAGACA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:23755638\|23896024	NOP56	0	1	0
chr12:23755638\|23896024	BUD13	1	1	6
chr12:23755638\|23896024	NOP58	1	0	1
chr12:23755638\|23896024	U2AF1	0	0	1
chr12:23755638\|23896024	EIF3A	1	0	0
chr12:23755638\|23896024	EIF3B	1	0	0
chr12:23755638\|23896024	U2AF2	1	0	1
chr12:23755638\|23896024	SRSF9	0	0	2
chr12:23755638\|23896024	AGO2	1	0	0
chr12:23755638\|23896024	EIF3D	1	0	0
chr12:23755638\|23896024	EWSR1	0	2	0
chr12:23755638\|23896024	PRPF8	0	0	2
chr12:23755638\|23896024	TAF15	1	0	0
chr12:23755638\|23896024	SF3A3	1	0	0
chr12:23755638\|23896024	SRSF1	0	1	5
chr12:23755638\|23896024	PTBP1	1	0	0
chr12:23755638\|23896024	IGF2BP2	1	4	6
chr12:23755638\|23896024	TRA2A	0	0	1
chr12:23755638\|23896024	EIF4A3	0	0	1
chr12:23755638\|23896024	FUS	0	0	1

CircRNA Information