CircNet

General Information

circRNA Basic Information

CircID	chr12:26387434\|26475418
Strand	-
CircType	exon
Host Gene	ENSG00000123104.11;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTGGATGTGATGAAGAATGCCTATAACCAAGGATTGGAATGTGACCATGGGGATGATGAGGGTGGAGATGATGGTGTTTCTCCAAAAGATGTTGGACACAATATCTATATTCTGGCCCATCAGTTGGCCCGCCACAATAAACTGTTGCAGCAGATGCTCAAACCAGGATCGGATCCAGATGAAGGAGATGAAGCCTTAAAGTATTATGCCAACCACACTGCACAGATTGAGGACTTGAGAGAGACAAGTTTGATAATAAAACGGTTTCATTTGAGGAGCACATTAAGTCAGAACACAATATGTGGCATTATTTGTACTTCATAGTCCTGGTGAAAGTTAAAGACCCAACAGAATACACTGGACCTGAAAGTTATGTGGCTCAAATGATTGTG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:26387434\|26475418	hsa-miR-143-3p	0	1	1
chr12:26387434\|26475418	hsa-miR-127-3p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:26387434\|26475418
ORF Type	ORF1
Protein Length	105
Nucleotide Length	315
Protein Sequence	MKNAYNQGLECDHGDDEGGDDGVSPKDVGHNIYILAHQLARHNKLLQQMLKPGSDPDEGDEALKYYANHTAQIEDLRETSLIIKRFHLRSTLSQNTICGIICTS*
Nucleotide Sequence	ATGAAGAATGCCTATAACCAAGGATTGGAATGTGACCATGGGGATGATGAGGGTGGAGATGATGGTGTTTCTCCAAAAGATGTTGGACACAATATCTATATTCTGGCCCATCAGTTGGCCCGCCACAATAAACTGTTGCAGCAGATGCTCAAACCAGGATCGGATCCAGATGAAGGAGATGAAGCCTTAAAGTATTATGCCAACCACACTGCACAGATTGAGGACTTGAGAGAGACAAGTTTGATAATAAAACGGTTTCATTTGAGGAGCACATTAAGTCAGAACACAATATGTGGCATTATTTGTACTTCATAG

CircID	chr12:26387434\|26475418
ORF Type	ORF2
Protein Length	61
Nucleotide Length	183
Protein Sequence	MPITKDWNVTMGMMRVEMMVFLQKMLDTISIFWPISWPATINCCSRCSNQDRIQMKEMKP*
Nucleotide Sequence	ATGCCTATAACCAAGGATTGGAATGTGACCATGGGGATGATGAGGGTGGAGATGATGGTGTTTCTCCAAAAGATGTTGGACACAATATCTATATTCTGGCCCATCAGTTGGCCCGCCACAATAAACTGTTGCAGCAGATGCTCAAACCAGGATCGGATCCAGATGAAGGAGATGAAGCCTTAA

CircID	chr12:26387434\|26475418
ORF Type	ORF3
Protein Length	42
Nucleotide Length	126
Protein Sequence	MCSSNETVLLSNLSLSSPQSVQCGWHNTLRLHLLHLDPILV*
Nucleotide Sequence	ATGTGCTCCTCAAATGAAACCGTTTTATTATCAAACTTGTCTCTCTCAAGTCCTCAATCTGTGCAGTGTGGTTGGCATAATACTTTAAGGCTTCATCTCCTTCATCTGGATCCGATCCTGGTTTGA

CircID	chr12:26387434\|26475418
ORF Type	ORF4
Protein Length	40
Nucleotide Length	120
Protein Sequence	MGQNIDIVSNIFWRNTIISTLIIPMVTFQSLVIGILHHIH
Nucleotide Sequence	ATGGGCCAGAATATAGATATTGTGTCCAACATCTTTTGGAGAAACACCATCATCTCCACCCTCATCATCCCCATGGTCACATTCCAATCCTTGGTTATAGGCATTCTTCATCACATCCAC

CircID	chr12:26387434\|26475418
ORF Type	ORF5
Protein Length	31
Nucleotide Length	93
Protein Sequence	MWHYLYFIVLVKVKDPTEYTGPESYVAQMIV
Nucleotide Sequence	ATGTGGCATTATTTGTACTTCATAGTCCTGGTGAAAGTTAAAGACCCAACAGAATACACTGGACCTGAAAGTTATGTGGCTCAAATGATTGTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:26387434\|26475418	ELAVL1	1	3	0
chr12:26387434\|26475418	DHX9	0	1	0
chr12:26387434\|26475418	HNRNPC	1	0	0
chr12:26387434\|26475418	NOP58	0	1	1
chr12:26387434\|26475418	FBL	1	0	0
chr12:26387434\|26475418	HNRNPA1	0	2	0
chr12:26387434\|26475418	U2AF2	2	3	0
chr12:26387434\|26475418	CSTF2T	0	0	2
chr12:26387434\|26475418	LIN28B	0	0	2
chr12:26387434\|26475418	DDX54	0	1	7
chr12:26387434\|26475418	RBFOX2	1	0	0
chr12:26387434\|26475418	FUS	1	0	0
chr12:26387434\|26475418	PRPF8	0	1	0
chr12:26387434\|26475418	HNRNPK	1	0	0
chr12:26387434\|26475418	HNRNPL	2	2	0
chr12:26387434\|26475418	FMR1	1	0	1
chr12:26387434\|26475418	RBM47	0	1	0
chr12:26387434\|26475418	IGF2BP2	3	1	1
chr12:26387434\|26475418	AGO1	0	0	1
chr12:26387434\|26475418	EIF4A3	1	4	7
chr12:26387434\|26475418	AGO2	0	0	1

CircRNA Information