CircNet

General Information

circRNA Basic Information

CircID	chr12:26663685\|26695650
Strand	-
CircType	exon
Host Gene	ENSG00000123104.11;
Algorism	find_circ;CIRI2;CIRC
Sequence	CTTAATCCTGATTATCGAGATGCCCAAAATGAAGGAAAAAATGTGGTGAAGAGATGGAGTCCCTCCAACTTCAAAGAAAAAACGCCAGGCAGGGGAGAAGATCATGTATACTTTGGTTTCAGTCCCGCATGGCAATGACATTGCATCCCTTTTTGAACTAGATGCCACAACTCTTCAGAGAGCTGACTGCCTGGTTCCAAGGAACTCATATGTTCGGTTAAGGCATTTATGCACCAACACATGGGTAACCAGTACTAGTATCCCCATAGACACAGATGAAGAGAGGCCTGTTATGTTAAAGATTGGAACCTGCCAAACCAAAGAAGATAAAGAAGCGTTCGCAATCGTGTCTGTTCCACTGTCTGAAGTTCGAGACTTAGACTTTGCCAATGATGCCAATAAAGTACTAGCGACCACAGTTAAAAAGCTAGAAAACGGCACAATAACTCAGAATGAAAGGAGGTTTGTAACCAAATTATTGGAAGATCTCATATTCTTTGTTGCTGATGTGCCTAATAATGGACAAGAAGTTCTGGATGTGGTTATCACTAAGCCAAACCGAGAGCGTCAAAAATTGATGAGGGAACAAAACATACTGGCACAGGTATTTGGAATTCTTAAAGCACCCTTTAAAGAGAAAGCAGGAGAAGGCTCGATGCTGAGACTTGAAGATCTGGGGGATCAAAGATATGCACCCTACAAGTACATGCTGCGGCTCTGTTACCGCGTCCTGAGACACTCGCAGCAGGATTACCGGAAAAATCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:26663685\|26695650	hsa-miR-9-5p	0	1	1
chr12:26663685\|26695650	hsa-miR-29b-2-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:26663685\|26695650
ORF Type	ORF1
Protein Length	221
Nucleotide Length	663
Protein Sequence	MYTLVSVPHGNDIASLFELDATTLQRADCLVPRNSYVRLRHLCTNTWVTSTSIPIDTDEERPVMLKIGTCQTKEDKEAFAIVSVPLSEVRDLDFANDANKVLATTVKKLENGTITQNERRFVTKLLEDLIFFVADVPNNGQEVLDVVITKPNRERQKLMREQNILAQVFGILKAPFKEKAGEGSMLRLEDLGDQRYAPYKYMLRLCYRVLRHSQQDYRKNQ
Nucleotide Sequence	ATGTATACTTTGGTTTCAGTCCCGCATGGCAATGACATTGCATCCCTTTTTGAACTAGATGCCACAACTCTTCAGAGAGCTGACTGCCTGGTTCCAAGGAACTCATATGTTCGGTTAAGGCATTTATGCACCAACACATGGGTAACCAGTACTAGTATCCCCATAGACACAGATGAAGAGAGGCCTGTTATGTTAAAGATTGGAACCTGCCAAACCAAAGAAGATAAAGAAGCGTTCGCAATCGTGTCTGTTCCACTGTCTGAAGTTCGAGACTTAGACTTTGCCAATGATGCCAATAAAGTACTAGCGACCACAGTTAAAAAGCTAGAAAACGGCACAATAACTCAGAATGAAAGGAGGTTTGTAACCAAATTATTGGAAGATCTCATATTCTTTGTTGCTGATGTGCCTAATAATGGACAAGAAGTTCTGGATGTGGTTATCACTAAGCCAAACCGAGAGCGTCAAAAATTGATGAGGGAACAAAACATACTGGCACAGGTATTTGGAATTCTTAAAGCACCCTTTAAAGAGAAAGCAGGAGAAGGCTCGATGCTGAGACTTGAAGATCTGGGGGATCAAAGATATGCACCCTACAAGTACATGCTGCGGCTCTGTTACCGCGTCCTGAGACACTCGCAGCAGGATTACCGGAAAAATCAG

CircID	chr12:26663685\|26695650
ORF Type	ORF2
Protein Length	47
Nucleotide Length	141
Protein Sequence	MCWCINALTEHMSSLEPGSQLSEELWHLVQKGMQCHCHAGLKPKYT*
Nucleotide Sequence	ATGTGTTGGTGCATAAATGCCTTAACCGAACATATGAGTTCCTTGGAACCAGGCAGTCAGCTCTCTGAAGAGTTGTGGCATCTAGTTCAAAAAGGGATGCAATGTCATTGCCATGCGGGACTGAAACCAAAGTATACATGA

CircID	chr12:26663685\|26695650
ORF Type	ORF3
Protein Length	47
Nucleotide Length	141
Protein Sequence	MSLPCGTETKVYMIFSPAWRFFFEVGGTPSLHHIFSFILGISIIRIK
Nucleotide Sequence	ATGTCATTGCCATGCGGGACTGAAACCAAAGTATACATGATCTTCTCCCCTGCCTGGCGTTTTTTCTTTGAAGTTGGAGGGACTCCATCTCTTCACCACATTTTTTCCTTCATTTTGGGCATCTCGATAATCAGGATTAAG

CircID	chr12:26663685\|26695650
ORF Type	ORF4
Protein Length	89
Nucleotide Length	267
Protein Sequence	VPFSSFLTVVASTLLASLAKSKSRTSDSGTDTIANASLSSLVWQVPIFNITGLSSSVSMGILVLVTHVLVHKCLNRTYEFLGTRQSAL*
Nucleotide Sequence	GTGCCGTTTTCTAGCTTTTTAACTGTGGTCGCTAGTACTTTATTGGCATCATTGGCAAAGTCTAAGTCTCGAACTTCAGACAGTGGAACAGACACGATTGCGAACGCTTCTTTATCTTCTTTGGTTTGGCAGGTTCCAATCTTTAACATAACAGGCCTCTCTTCATCTGTGTCTATGGGGATACTAGTACTGGTTACCCATGTGTTGGTGCATAAATGCCTTAACCGAACATATGAGTTCCTTGGAACCAGGCAGTCAGCTCTCTGA

CircID	chr12:26663685\|26695650
ORF Type	ORF5
Protein Length	88
Nucleotide Length	264
Protein Sequence	VSQDAVTEPQHVLVGCISLIPQIFKSQHRAFSCFLFKGCFKNSKYLCQYVLFPHQFLTLSVWLSDNHIQNFLSIIRHISNKEYEIFQ*
Nucleotide Sequence	GTGTCTCAGGACGCGGTAACAGAGCCGCAGCATGTACTTGTAGGGTGCATATCTTTGATCCCCCAGATCTTCAAGTCTCAGCATCGAGCCTTCTCCTGCTTTCTCTTTAAAGGGTGCTTTAAGAATTCCAAATACCTGTGCCAGTATGTTTTGTTCCCTCATCAATTTTTGACGCTCTCGGTTTGGCTTAGTGATAACCACATCCAGAACTTCTTGTCCATTATTAGGCACATCAGCAACAAAGAATATGAGATCTTCCAATAA

CircID	chr12:26663685\|26695650
ORF Type	ORF6
Protein Length	36
Nucleotide Length	108
Protein Sequence	MESLQLQRKNARQGRRSCILWFQSRMAMTLHPFLN*
Nucleotide Sequence	ATGGAGTCCCTCCAACTTCAAAGAAAAAACGCCAGGCAGGGGAGAAGATCATGTATACTTTGGTTTCAGTCCCGCATGGCAATGACATTGCATCCCTTTTTGAACTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:26663685\|26695650	IGF2BP2	1	1	3
chr12:26663685\|26695650	BUD13	0	0	4
chr12:26663685\|26695650	ELAVL1	2	2	1
chr12:26663685\|26695650	CSTF2	0	2	0
chr12:26663685\|26695650	HNRNPC	0	1	0
chr12:26663685\|26695650	U2AF2	9	0	1
chr12:26663685\|26695650	CSTF2T	0	0	3
chr12:26663685\|26695650	DDX54	0	0	12
chr12:26663685\|26695650	RBFOX2	1	0	0
chr12:26663685\|26695650	FUS	3	0	0
chr12:26663685\|26695650	PRPF8	0	2	0
chr12:26663685\|26695650	PTBP1	0	1	0
chr12:26663685\|26695650	EIF4A3	4	2	14
chr12:26663685\|26695650	AGO2	0	1	1
chr12:26663685\|26695650	FMR1	0	0	1
chr12:26663685\|26695650	SRSF1	0	0	3
chr12:26663685\|26695650	IGF2BP3	0	0	1
chr12:26663685\|26695650	FBL	0	3	1
chr12:26663685\|26695650	TRA2A	0	0	1
chr12:26663685\|26695650	MOV10	0	0	1
chr12:26663685\|26695650	NOP58	1	1	2

CircRNA Information