CircNet

General Information

circRNA Basic Information

CircID	chr12:27368262\|27418196
Strand	+
CircType	exon
Host Gene	ENSG00000029153.14;
Algorism	find_circ;CIRI2;DCC;
Sequence	GTAAAGTGTTGAGAGAGGAGAACCAGTGCATTGCTCCTGTGGTTTCCAGCCGCGTGAGTCCAGGGACAAGACCAACAGCTATGGGGTCTTTCAGCTCACACATGACAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGACCCATCCCAGTTACAGTCTTCTTCATACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTATGTCAAATAAGGAGTTGTTTCCACCAAGTCCTTCTGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCCACTCCTCA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:27368262\|27418196	hsa-miR-29b-1-5p	0	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:27368262\|27418196
ORF Type	ORF1
Protein Length	86
Nucleotide Length	258
Protein Sequence	MGSFSSHMTEFPRKRKGSDSDPSQLQSSSYLDDSSPTGLMKDTHTVNCRSMSNKELFPPSPSEMGELEATRQNQSTVAVHSHEPLL
Nucleotide Sequence	ATGGGGTCTTTCAGCTCACACATGACAGAGTTTCCACGAAAACGCAAAGGAAGTGATTCAGACCCATCCCAGTTACAGTCTTCTTCATACCTTGATGATTCGAGTCCAACAGGTTTAATGAAAGATACTCATACTGTAAACTGCAGGAGTATGTCAAATAAGGAGTTGTTTCCACCAAGTCCTTCTGAAATGGGGGAGCTAGAGGCTACCAGGCAAAACCAGAGTACTGTTGCTGTCCACAGCCATGAGCCACTCCTC

CircID	chr12:27368262\|27418196
ORF Type	ORF2
Protein Length	34
Nucleotide Length	102
Protein Sequence	MCELKDPIAVGLVPGLTRLETTGAMHWFSSLNTL
Nucleotide Sequence	ATGTGTGAGCTGAAAGACCCCATAGCTGTTGGTCTTGTCCCTGGACTCACGCGGCTGGAAACCACAGGAGCAATGCACTGGTTCTCCTCTCTCAACACTTTA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:27368262\|27418196	MOV10	0	0	1
chr12:27368262\|27418196	ELAVL1	0	2	1
chr12:27368262\|27418196	CELF2	1	0	0
chr12:27368262\|27418196	PRPF8	0	1	2
chr12:27368262\|27418196	TAF15	1	0	0
chr12:27368262\|27418196	FMR1	0	0	3
chr12:27368262\|27418196	CPSF3	0	1	0
chr12:27368262\|27418196	SRSF1	0	0	1
chr12:27368262\|27418196	U2AF2	2	0	0
chr12:27368262\|27418196	DDX54	0	1	1
chr12:27368262\|27418196	FIP1L1	0	1	1
chr12:27368262\|27418196	PTBP1	1	0	0
chr12:27368262\|27418196	HNRNPD	0	1	0
chr12:27368262\|27418196	RANGAP1	1	0	0
chr12:27368262\|27418196	IGF2BP3	0	0	3
chr12:27368262\|27418196	IGF2BP2	0	0	1
chr12:27368262\|27418196	TARDBP	0	1	0
chr12:27368262\|27418196	RBM47	0	0	1
chr12:27368262\|27418196	CSTF2	0	2	0
chr12:27368262\|27418196	AGO2	0	0	1
chr12:27368262\|27418196	EIF4A3	1	0	1
chr12:27368262\|27418196	FBL	1	0	0

CircRNA Information