CircRNA Information

General Information
circRNA Basic Information
CircID chr12:2940513|2940685
Strand -
CircType exon
Host Gene ENSG00000078246.14;
Algorism CIRI2;
Sequence CAGTTCACCCTTCCCAGAATGTATCCAAACCTTGAGAATGCAGGAGCTCTGTGAGCTCCACCGTCAGCACCATTCAGCTGCATCCCTTGTGCACAGAACTGTTTGCCAGCGTTGGGTGGGACACCCGTGGCGGCTGCTCCCTCAGACCTCCCTTCTGTGGACTGACCTCTCAC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:2940513|2940685 hsa-miR-181c-5p 0 0 1
chr12:2940513|2940685 hsa-miR-181c-3p 0 0 1
chr12:2940513|2940685 hsa-miR-181d-5p 0 0 1
chr12:2940513|2940685 hsa-miR-181d-3p 0 0 1
chr12:2940513|2940685 hsa-miR-1301-5p 0 0 1
chr12:2940513|2940685 hsa-miR-1301-3p 0 0 1
chr12:2940513|2940685 hsa-miR-1261 0 0 1
chr12:2940513|2940685 hsa-miR-513c-5p 0 0 1
chr12:2940513|2940685 hsa-miR-513c-3p 0 0 1
chr12:2940513|2940685 hsa-miR-1321 0 0 1
chr12:2940513|2940685 hsa-miR-1224-3p 0 0 1
chr12:2940513|2940685 hsa-miR-628-5p 0 0 1
chr12:2940513|2940685 hsa-miR-455-3p 0 0 1
chr12:2940513|2940685 hsa-miR-1260 0 0 1
chr12:2940513|2940685 hsa-miR-1280 0 0 1
chr12:2940513|2940685 hsa-miR-181a 0 0 1
chr12:2940513|2940685 hsa-miR-181b 0 0 1
chr12:2940513|2940685 hsa-miR-608 1 0 0
chr12:2940513|2940685 hsa-miR-1231 1 0 0
chr12:2940513|2940685 hsa-miR-1275 1 0 0
chr12:2940513|2940685 hsa-miR-1324 0 1 0
chr12:2940513|2940685 hsa-miR-3139 0 1 0
chr12:2940513|2940685 hsa-miR-3154 1 1 0
chr12:2940513|2940685 hsa-miR-4314 0 1 0
chr12:2940513|2940685 hsa-miR-4277 0 1 0
chr12:2940513|2940685 hsa-miR-3657 0 1 0
chr12:2940513|2940685 hsa-miR-4464 0 1 0
chr12:2940513|2940685 hsa-miR-4490 0 1 0
chr12:2940513|2940685 hsa-miR-4510 1 1 0
chr12:2940513|2940685 hsa-miR-4533 1 0 0
chr12:2940513|2940685 hsa-miR-4706 1 0 0
chr12:2940513|2940685 hsa-miR-4739 1 1 0
chr12:2940513|2940685 hsa-miR-4748 0 1 0
chr12:2940513|2940685 hsa-miR-6081 1 1 0
chr12:2940513|2940685 hsa-miR-6127 0 1 0
chr12:2940513|2940685 hsa-miR-6129 1 0 0
chr12:2940513|2940685 hsa-miR-9718 0 1 0
chr12:2940513|2940685 hsa-miR-12119 1 1 0
chr12:2940513|2940685 hsa-miR-6734-5p 1 0 0
chr12:2940513|2940685 hsa-miR-6765-5p 1 0 0
chr12:2940513|2940685 hsa-miR-6825-5p 1 0 0
chr12:2940513|2940685 hsa-miR-6799-5p 1 1 0
chr12:2940513|2940685 hsa-miR-6089 1 0 0
chr12:2940513|2940685 hsa-miR-6805-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1226-5p 1 0 0
chr12:2940513|2940685 hsa-miR-204-3p 0 1 0
chr12:2940513|2940685 hsa-miR-3127-5p 1 0 0
chr12:2940513|2940685 hsa-miR-149-3p 1 0 0
chr12:2940513|2940685 hsa-miR-6824-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1225-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1910-5p 1 0 0
chr12:2940513|2940685 hsa-miR-6746-3p 0 1 0
chr12:2940513|2940685 hsa-miR-483-5p 1 0 0
chr12:2940513|2940685 hsa-miR-28-5p 0 1 0
chr12:2940513|2940685 hsa-miR-3670 0 1 0
chr12:2940513|2940685 hsa-miR-4433a-5p 0 1 0
chr12:2940513|2940685 hsa-miR-4433b-5p 0 1 0
chr12:2940513|2940685 hsa-miR-1207-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1233-5p 0 1 0
chr12:2940513|2940685 hsa-miR-1273h-5p 1 1 0
chr12:2940513|2940685 hsa-miR-1343-5p 1 1 0
chr12:2940513|2940685 hsa-miR-6752-5p 1 0 0
chr12:2940513|2940685 hsa-miR-7110-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1249-5p 1 0 0
chr12:2940513|2940685 hsa-miR-4728-5p 1 0 0
chr12:2940513|2940685 hsa-miR-5189-5p 1 0 0
chr12:2940513|2940685 hsa-miR-328-5p 1 0 0
chr12:2940513|2940685 hsa-miR-6858-5p 1 0 0
chr12:2940513|2940685 hsa-miR-4697-5p 1 0 0
chr12:2940513|2940685 hsa-miR-939-5p 1 0 0
chr12:2940513|2940685 hsa-miR-4758-5p 1 1 0
chr12:2940513|2940685 hsa-miR-6511b-5p 1 0 0
chr12:2940513|2940685 hsa-miR-1914-3p 1 0 0
chr12:2940513|2940685 hsa-miR-4646-5p 0 1 0
chr12:2940513|2940685 hsa-miR-6891-5p 1 0 0
chr12:2940513|2940685 hsa-miR-5591-5p 1 0 0
chr12:2940513|2940685 hsa-miR-9851-5p 1 0 0
chr12:2940513|2940685 hsa-miR-4756-5p 1 0 0
chr12:2940513|2940685 hsa-miR-514b-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:2940513|2940685
ORF Type ORF1
Protein Length 47
Nucleotide Length 141
Protein Sequence MRMQELCELHRQHHSAASLVHRTVCQRWVGHPWRLLPQTSLLWTDLS
Nucleotide Sequence TTGAGAATGCAGGAGCTCTGTGAGCTCCACCGTCAGCACCATTCAGCTGCATCCCTTGTGCACAGAACTGTTTGCCAGCGTTGGGTGGGACACCCGTGGCGGCTGCTCCCTCAGACCTCCCTTCTGTGGACTGACCTCTCA

CircID chr12:2940513|2940685
ORF Type ORF2
Protein Length 32
Nucleotide Length 96
Protein Sequence MHPLCTELFASVGWDTRGGCSLRPPFCGLTSH
Nucleotide Sequence CTGCATCCCTTGTGCACAGAACTGTTTGCCAGCGTTGGGTGGGACACCCGTGGCGGCTGCTCCCTCAGACCTCCCTTCTGTGGACTGACCTCTCAC

CircID chr12:2940513|2940685
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MQLNGADGGAHRAPAFSRFGYILGRVN
Nucleotide Sequence ATGCAGCTGAATGGTGCTGACGGTGGAGCTCACAGAGCTCCTGCATTCTCAAGGTTTGGATACATTCTGGGAAGGGTGAAC

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites