CircNet

General Information

circRNA Basic Information

CircID	chr12:30734968\|30741106
Strand	-
CircType	exon
Host Gene	ENSG00000110888.17;
Algorism	find_circ;CIRI2;DCC;
Sequence	GAAGCTGTAGAGAAATATGAAGAAGTGCTACATAATTTGGAATTTGCCAAGGAGCTTCAAAAAACCTTTTCTGGGTTGAGCCTAGATCTACTAAAAGCGCAAAAGAAGGCCCAGAGAAGGGAGCACATGCTAAAACTTGAGGCTGAGAAGAAAAAGCTTCGAACTATACTTCAAGTTCAGTATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACCTCATTAAGTTTTCAAAACTGACCTGCCCTGAAAGAAATGAAAGTCTGAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:30734968\|30741106
ORF Type	ORF1
Protein Length	66
Nucleotide Length	198
Protein Sequence	MLKLEAEKKKLRTILQVQYVLQNLTQEHVQKDFKGGLNGAVYLPSKELDYLIKFSKLTCPERNESL
Nucleotide Sequence	ATGCTAAAACTTGAGGCTGAGAAGAAAAAGCTTCGAACTATACTTCAAGTTCAGTATGTATTGCAGAACTTGACACAGGAGCACGTACAAAAAGACTTCAAAGGGGGTTTGAATGGTGCAGTGTATTTGCCTTCAAAAGAACTTGACTACCTCATTAAGTTTTCAAAACTGACCTGCCCTGAAAGAAATGAAAGTCTG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:30734968\|30741106	U2AF2	12	1	0
chr12:30734968\|30741106	FUS	1	1	0
chr12:30734968\|30741106	ELAVL3	1	0	0
chr12:30734968\|30741106	PRPF8	0	4	0
chr12:30734968\|30741106	FMR1	0	1	1
chr12:30734968\|30741106	CPSF6	1	0	0
chr12:30734968\|30741106	SRSF7	0	1	0
chr12:30734968\|30741106	SRSF1	0	0	2
chr12:30734968\|30741106	NOP58	1	0	1
chr12:30734968\|30741106	U2AF1	0	0	1
chr12:30734968\|30741106	ADAR	0	1	0
chr12:30734968\|30741106	KHSRP	3	1	0
chr12:30734968\|30741106	DDX54	0	0	3
chr12:30734968\|30741106	HNRNPM	1	0	0
chr12:30734968\|30741106	SF3A3	1	0	0
chr12:30734968\|30741106	HNRNPC	0	6	0
chr12:30734968\|30741106	TRA2A	0	0	1
chr12:30734968\|30741106	HNRNPA2B1	0	1	0
chr12:30734968\|30741106	ZNF184	1	0	1
chr12:30734968\|30741106	SMNDC1	0	1	2
chr12:30734968\|30741106	AUH	0	0	1
chr12:30734968\|30741106	HNRNPA1	0	1	0
chr12:30734968\|30741106	IGF2BP1	0	5	0
chr12:30734968\|30741106	IGF2BP2	2	1	6
chr12:30734968\|30741106	HNRNPUL1	0	3	0
chr12:30734968\|30741106	TARDBP	0	11	0
chr12:30734968\|30741106	BUD13	0	1	3
chr12:30734968\|30741106	EIF4G2	0	2	0
chr12:30734968\|30741106	ILF3	0	2	0
chr12:30734968\|30741106	AGO2	0	1	1
chr12:30734968\|30741106	AGO1	0	0	1
chr12:30734968\|30741106	EIF4A3	2	3	5
chr12:30734968\|30741106	FBL	1	1	1

CircRNA Information