CircNet

General Information

circRNA Basic Information

CircID	chr12:318106\|318461
Strand	-
CircType	exon
Host Gene	ENSG00000073614.12;
Algorism	find_circ;CIRI2;DCC;
Sequence	AATCTGCTAGATGATGTGGAAGAGTTTCATGAACGTGCTCAGGAGGCCATGATGGATGAAACCCCAGATTCTTCCAAACTCCAGATGTTGATAGATATGGGCTCTAGTCTCTATGTGGAACTCCCTGAATTACCACGACTGAAGCAAGAGCTACAACAGGCTCGGTGGTTGGACGAAGTAAGACTGACCTTATCAGATCCGCAACAAGTCACTTTGGATGTCATGAAGAAGCTGATAGACTCTGGGGTAGGGTTGGCACCCCACCATGCTGTGGAGAAAGCAATGGCTGAACTACAGGAGCTCCTTACAGTCTCTGAACGATGGGAAGAAAAGGCTAAGGTCTGCCTACAGGCAAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:318106\|318461	hsa-miR-622	1	1	1
chr12:318106\|318461	hsa-miR-760	1	1	1
chr12:318106\|318461	hsa-miR-3185	1	1	1
chr12:318106\|318461	hsa-miR-4539	1	1	1
chr12:318106\|318461	hsa-miR-8060	1	1	1
chr12:318106\|318461	hsa-miR-323a-5p	1	1	1
chr12:318106\|318461	hsa-miR-187-5p	1	1	1
chr12:318106\|318461	hsa-miR-6089	1	1	1
chr12:318106\|318461	hsa-miR-4459	1	1	1
chr12:318106\|318461	hsa-miR-345-3p	1	1	1
chr12:318106\|318461	hsa-miR-6786-5p	1	1	1
chr12:318106\|318461	hsa-miR-28-5p	1	1	1

Target Genes

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:318106\|318461
ORF Type	ORF1
Protein Length	102
Nucleotide Length	306
Protein Sequence	MMDETPDSSKLQMLIDMGSSLYVELPELPRLKQELQQARWLDEVRLTLSDPQQVTLDVMKKLIDSGVGLAPHHAVEKAMAELQELLTVSERWEEKAKVCLQA
Nucleotide Sequence	ATGATGGATGAAACCCCAGATTCTTCCAAACTCCAGATGTTGATAGATATGGGCTCTAGTCTCTATGTGGAACTCCCTGAATTACCACGACTGAAGCAAGAGCTACAACAGGCTCGGTGGTTGGACGAAGTAAGACTGACCTTATCAGATCCGCAACAAGTCACTTTGGATGTCATGAAGAAGCTGATAGACTCTGGGGTAGGGTTGGCACCCCACCATGCTGTGGAGAAAGCAATGGCTGAACTACAGGAGCTCCTTACAGTCTCTGAACGATGGGAAGAAAAGGCTAAGGTCTGCCTACAGGCA

CircID	chr12:318106\|318461
ORF Type	ORF2
Protein Length	38
Nucleotide Length	114
Protein Sequence	MTSKVTCCGSDKVSLTSSNHRACCSSCFSRGNSGSST*
Nucleotide Sequence	ATGACATCCAAAGTGACTTGTTGCGGATCTGATAAGGTCAGTCTTACTTCGTCCAACCACCGAGCCTGTTGTAGCTCTTGCTTCAGTCGTGGTAATTCAGGGAGTTCCACATAG

CircID	chr12:318106\|318461
ORF Type	ORF3
Protein Length	30
Nucleotide Length	90
Protein Sequence	MLWRKQWLNYRSSLQSLNDGKKRLRSAYRQ
Nucleotide Sequence	ATGCTGTGGAGAAAGCAATGGCTGAACTACAGGAGCTCCTTACAGTCTCTGAACGATGGGAAGAAAAGGCTAAGGTCTGCCTACAGGCAA

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:318106\|318461	U2AF2	11	5	0
chr12:318106\|318461	ELAVL1	3	0	2
chr12:318106\|318461	DHX9	0	1	0
chr12:318106\|318461	CELF2	2	0	0
chr12:318106\|318461	CPSF7	0	0	1
chr12:318106\|318461	UPF1	2	0	0
chr12:318106\|318461	FMR1	0	0	7
chr12:318106\|318461	NUDT21	0	1	0
chr12:318106\|318461	CPSF1	1	1	0
chr12:318106\|318461	FUS	1	2	0
chr12:318106\|318461	SRSF1	0	0	4
chr12:318106\|318461	NOP58	0	0	5
chr12:318106\|318461	NOP56	0	0	1
chr12:318106\|318461	SRSF9	0	1	0
chr12:318106\|318461	DDX54	0	0	5
chr12:318106\|318461	HNRNPK	1	1	0
chr12:318106\|318461	SF3A3	1	0	0
chr12:318106\|318461	PTBP1	0	0	1
chr12:318106\|318461	HNRNPC	24	16	4
chr12:318106\|318461	TRA2A	0	0	1
chr12:318106\|318461	ZNF184	0	0	3
chr12:318106\|318461	DDX3X	0	0	1
chr12:318106\|318461	SMNDC1	1	1	0
chr12:318106\|318461	HNRNPA1	2	4	0
chr12:318106\|318461	RANGAP1	0	1	1
chr12:318106\|318461	LIN28A	0	0	1
chr12:318106\|318461	FXR1	0	0	2
chr12:318106\|318461	BCCIP	0	0	1
chr12:318106\|318461	BUD13	1	0	2
chr12:318106\|318461	IGF2BP3	0	0	2
chr12:318106\|318461	IGF2BP2	1	0	5
chr12:318106\|318461	TARDBP	1	1	0
chr12:318106\|318461	STAU1	2	0	0
chr12:318106\|318461	GTF2F1	0	1	2
chr12:318106\|318461	PRPF8	1	0	0
chr12:318106\|318461	SLTM	0	0	3
chr12:318106\|318461	CSTF2T	0	2	0
chr12:318106\|318461	FXR2	0	0	4
chr12:318106\|318461	RBM22	0	1	0
chr12:318106\|318461	AGO2	0	0	2
chr12:318106\|318461	EWSR1	0	0	1
chr12:318106\|318461	EIF4A3	3	7	2
chr12:318106\|318461	FBL	0	1	3

CircRNA Information