CircRNA Information

General Information
circRNA Basic Information
CircID chr12:32607957|32611283
Strand +
CircType exon
Host Gene ENSG00000139132.14;
Algorism find_circ;CIRI2;DCC;
Sequence AAACAGAAAATCTGTGGGAGCTTAACTTTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGACTATCTAAGGAAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGGAAAATGGAGAACCTAAAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAACCCTTCAAATGAACTAATAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACTTCAGCACAAGAACGCTACCTTTTCTTA
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:32607957|32611283 hsa-miR-15a-5p 0 0 1
chr12:32607957|32611283 hsa-miR-15a-3p 0 0 1
chr12:32607957|32611283 hsa-miR-22-5p 0 0 1
chr12:32607957|32611283 hsa-miR-22-3p 0 0 1
chr12:32607957|32611283 hsa-miR-30a-5p 0 0 1
chr12:32607957|32611283 hsa-miR-30a-3p 0 0 1
chr12:32607957|32611283 hsa-miR-107 0 0 1
chr12:32607957|32611283 hsa-miR-30d-5p 0 0 1
chr12:32607957|32611283 hsa-miR-30d-3p 0 0 1
chr12:32607957|32611283 hsa-miR-15b-5p 0 0 1
chr12:32607957|32611283 hsa-miR-15b-3p 0 0 1
chr12:32607957|32611283 hsa-miR-30b-5p 0 0 1
chr12:32607957|32611283 hsa-miR-30b-3p 0 0 1
chr12:32607957|32611283 hsa-miR-130a-5p 0 0 1
chr12:32607957|32611283 hsa-miR-130a-3p 0 0 1
chr12:32607957|32611283 hsa-miR-143-5p 0 0 1
chr12:32607957|32611283 hsa-miR-143-3p 0 0 1
chr12:32607957|32611283 hsa-miR-186-5p 0 0 1
chr12:32607957|32611283 hsa-miR-186-3p 0 0 1
chr12:32607957|32611283 hsa-miR-195-5p 0 0 1
chr12:32607957|32611283 hsa-miR-195-3p 0 0 1
chr12:32607957|32611283 hsa-miR-206 0 0 1
chr12:32607957|32611283 hsa-miR-34b-5p 0 0 1
chr12:32607957|32611283 hsa-miR-34b-3p 0 0 1
chr12:32607957|32611283 hsa-miR-301a-5p 0 0 1
chr12:32607957|32611283 hsa-miR-301a-3p 0 0 1
chr12:32607957|32611283 hsa-miR-130b-5p 0 0 1
chr12:32607957|32611283 hsa-miR-130b-3p 0 0 1
chr12:32607957|32611283 hsa-miR-30e-5p 0 0 1
chr12:32607957|32611283 hsa-miR-30e-3p 0 0 1
chr12:32607957|32611283 hsa-miR-422a 0 0 1
chr12:32607957|32611283 hsa-miR-424-5p 0 0 1
chr12:32607957|32611283 hsa-miR-424-3p 0 0 1
chr12:32607957|32611283 hsa-miR-497-5p 0 0 1
chr12:32607957|32611283 hsa-miR-497-3p 0 0 1
chr12:32607957|32611283 hsa-miR-589-5p 0 0 1
chr12:32607957|32611283 hsa-miR-589-3p 0 0 1
chr12:32607957|32611283 hsa-miR-607 0 0 1
chr12:32607957|32611283 hsa-miR-613 0 0 1
chr12:32607957|32611283 hsa-miR-633 0 0 1
chr12:32607957|32611283 hsa-miR-641 0 0 1
chr12:32607957|32611283 hsa-miR-649 0 0 1
chr12:32607957|32611283 hsa-miR-1301-5p 0 0 1
chr12:32607957|32611283 hsa-miR-1301-3p 0 0 1
chr12:32607957|32611283 hsa-miR-454-5p 0 0 1
chr12:32607957|32611283 hsa-miR-454-3p 0 0 1
chr12:32607957|32611283 hsa-miR-301b-5p 0 0 1
chr12:32607957|32611283 hsa-miR-301b-3p 0 0 1
chr12:32607957|32611283 hsa-miR-920 0 0 1
chr12:32607957|32611283 hsa-miR-1303 0 0 1
chr12:32607957|32611283 hsa-miR-1253 0 1 1
chr12:32607957|32611283 hsa-miR-1288-5p 0 0 1
chr12:32607957|32611283 hsa-miR-1288-3p 0 0 1
chr12:32607957|32611283 hsa-miR-1322 0 0 1
chr12:32607957|32611283 hsa-miR-139-5p 0 0 1
chr12:32607957|32611283 hsa-miR-423-3p 0 0 1
chr12:32607957|32611283 hsa-miR-576-5p 0 0 1
chr12:32607957|32611283 hsa-miR-409-3p 0 0 1
chr12:32607957|32611283 hsa-miR-548c-3p 0 0 1
chr12:32607957|32611283 hsa-miR-105 0 0 1
chr12:32607957|32611283 hsa-miR-371-5p 0 0 1
chr12:32607957|32611283 hsa-miR-1274a 0 0 1
chr12:32607957|32611283 hsa-miR-103 0 0 1
chr12:32607957|32611283 hsa-miR-16 0 0 1
chr12:32607957|32611283 hsa-miR-30c 0 0 1
chr12:32607957|32611283 hsa-miR-378 0 0 1
chr12:32607957|32611283 hsa-miR-1269 0 0 1
chr12:32607957|32611283 hsa-miR-1 0 0 1
chr12:32607957|32611283 hsa-miR-203 0 0 1
chr12:32607957|32611283 hsa-miR-923 0 0 1
chr12:32607957|32611283 hsa-miR-1269a 0 1 0
chr12:32607957|32611283 hsa-miR-3131 1 0 0
chr12:32607957|32611283 hsa-miR-378b 0 1 0
chr12:32607957|32611283 hsa-miR-3147 1 0 0
chr12:32607957|32611283 hsa-miR-3185 0 1 0
chr12:32607957|32611283 hsa-miR-378c 0 1 0
chr12:32607957|32611283 hsa-miR-4300 0 1 0
chr12:32607957|32611283 hsa-miR-3916 0 1 0
chr12:32607957|32611283 hsa-miR-378e 0 1 0
chr12:32607957|32611283 hsa-miR-4430 1 0 0
chr12:32607957|32611283 hsa-miR-4477b 0 1 0
chr12:32607957|32611283 hsa-miR-4515 1 0 0
chr12:32607957|32611283 hsa-miR-4521 0 1 0
chr12:32607957|32611283 hsa-miR-1269b 0 1 0
chr12:32607957|32611283 hsa-miR-378i 0 1 0
chr12:32607957|32611283 hsa-miR-4739 1 0 0
chr12:32607957|32611283 hsa-miR-4759 0 1 0
chr12:32607957|32611283 hsa-miR-6081 1 0 0
chr12:32607957|32611283 hsa-miR-8085 1 0 0
chr12:32607957|32611283 hsa-miR-7106-5p 1 0 0
chr12:32607957|32611283 hsa-miR-6746-5p 1 1 0
chr12:32607957|32611283 hsa-miR-23a-5p 0 1 0
chr12:32607957|32611283 hsa-miR-3126-5p 1 1 0
chr12:32607957|32611283 hsa-miR-6760-5p 1 0 0
chr12:32607957|32611283 hsa-miR-6850-5p 1 0 0
chr12:32607957|32611283 hsa-miR-615-5p 1 0 0
chr12:32607957|32611283 hsa-miR-7109-5p 1 0 0
chr12:32607957|32611283 hsa-miR-4738-3p 1 0 0
chr12:32607957|32611283 hsa-miR-6516-5p 0 1 0
chr12:32607957|32611283 hsa-miR-103a-3p 0 1 0
chr12:32607957|32611283 hsa-miR-3162-5p 1 0 0
chr12:32607957|32611283 hsa-miR-3925-5p 0 1 0
chr12:32607957|32611283 hsa-miR-6878-5p 0 1 0
chr12:32607957|32611283 hsa-miR-5584-5p 0 1 0
chr12:32607957|32611283 hsa-miR-7856-5p 0 1 0
chr12:32607957|32611283 hsa-miR-6826-5p 0 1 0
chr12:32607957|32611283 hsa-miR-7106-3p 1 0 0
chr12:32607957|32611283 hsa-miR-660-3p 0 1 0
chr12:32607957|32611283 hsa-miR-7112-3p 0 1 0
chr12:32607957|32611283 hsa-miR-651-3p 0 1 0
chr12:32607957|32611283 hsa-miR-4423-5p 0 1 0
chr12:32607957|32611283 hsa-miR-6778-5p 0 1 0
chr12:32607957|32611283 hsa-miR-5001-5p 1 0 0
chr12:32607957|32611283 hsa-miR-6726-5p 0 1 0
chr12:32607957|32611283 hsa-miR-6780a-5p 1 0 0
chr12:32607957|32611283 hsa-miR-6788-5p 1 1 0
chr12:32607957|32611283 hsa-miR-3620-5p 1 0 0
chr12:32607957|32611283 hsa-miR-4649-5p 1 0 0
chr12:32607957|32611283 hsa-miR-30c-1-3p 1 0 0
chr12:32607957|32611283 hsa-miR-6731-5p 1 0 0
chr12:32607957|32611283 hsa-miR-6791-3p 0 1 0
chr12:32607957|32611283 hsa-miR-378a-3p 0 1 0
chr12:32607957|32611283 hsa-miR-5591-5p 0 1 0
chr12:32607957|32611283 hsa-miR-4661-5p 0 1 0
chr12:32607957|32611283 hsa-miR-378d 0 1 0
Target Genes
       

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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

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    by mir_boxplot.py

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circRNA Open Reading Frame (ORF)
CircID chr12:32607957|32611283
ORF Type ORF1
Protein Length 30
Nucleotide Length 93
Protein Sequence MKGLQCLLLLPTFHKSLRVSLGSPFSLLHY
Nucleotide Sequence TTGAAGGGTTTACAATGTCTTCTTCTTCTCCCAACATTTCATAAATCTCTAAGAGTTTCTTTAGGTTCTCCATTTTCCTTATTGCACTATTAG
CircID chr12:32607957|32611283
ORF Type ORF2
Protein Length 106
Nucleotide Length 318
Protein Sequence MQHHMLEPVQRIPRYEMLLKDYLRKLPPDSLDWNDAKKSLEIISTAASHSNSAIRKMENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFL
Nucleotide Sequence TTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGACTATCTAAGGAAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAAGGAAAATGGAGAACCTAAAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAACCCTTCAAATGAACTAATAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACTTCAGCACAAGAACGCTACCTTTTCTTA
CircID chr12:32607957|32611283
ORF Type ORF3
Protein Length 26
Nucleotide Length 81
Protein Sequence MIPWTGMMLKNHLKLYLQQQAILIVQ
Nucleotide Sequence CTGATTCCCTGGACTGGAATGATGCTAAAAAATCACTTGAAATTATATCTACAGCAGCAAGCCATTCTAATAGTGCAATAA
CircID chr12:32607957|32611283
ORF Type ORF1
Protein Length 39
Nucleotide Length 120
Protein Sequence MKGLQCLLLLPTFHKSLRVSLGSLLASFQSRESGGNFLR
Nucleotide Sequence TTGAAGGGTTTACAATGTCTTCTTCTTCTCCCAACATTTCATAAATCTCTAAGAGTTTCTTTAGGTTCTCTTTTAGCATCATTCCAGTCCAGGGAATCAGGAGGCAATTTCCTTAGATAG
CircID chr12:32607957|32611283
ORF Type ORF2
Protein Length 47
Nucleotide Length 144
Protein Sequence MQHHMLEPVQRIPRYEMLLKDYLRKLPPDSLDWNDAKREPKETLRDL
Nucleotide Sequence TTGCAGCATCACATGCTAGAACCTGTTCAGCGGATTCCCCGGTATGAGATGCTCCTTAAGGACTATCTAAGGAAATTGCCTCCTGATTCCCTGGACTGGAATGATGCTAAAAGAGAACCTAAAGAAACTCTTAGAGATTTATGA
CircID chr12:32607957|32611283
ORF Type ORF3
Protein Length 59
Nucleotide Length 177
Protein Sequence MIPWTGMMLKENLKKLLEIYEMLGEEEDIVNPSNELIKEGQILKLAARNTSAQERYLFL
Nucleotide Sequence CTGATTCCCTGGACTGGAATGATGCTAAAAGAGAACCTAAAGAAACTCTTAGAGATTTATGAAATGTTGGGAGAAGAAGAAGACATTGTAAACCCTTCAAATGAACTAATAAAAGAAGGACAGATCCTCAAACTAGCTGCTCGGAACACTTCAGCACAAGAACGCTACCTTTTCTTA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr12:32607957|32611283 ELAVL1 3 0 0
chr12:32607957|32611283 ZNF184 0 0 1
chr12:32607957|32611283 NOP56 1 0 0
chr12:32607957|32611283 BUD13 0 0 1
chr12:32607957|32611283 NOP58 0 1 1
chr12:32607957|32611283 U2AF2 3 0 0
chr12:32607957|32611283 CSTF2T 0 0 1
chr12:32607957|32611283 RANGAP1 0 1 0
chr12:32607957|32611283 DDX54 0 0 4
chr12:32607957|32611283 RBFOX2 0 1 0
chr12:32607957|32611283 FUS 2 0 0
chr12:32607957|32611283 PRPF8 0 2 1
chr12:32607957|32611283 TARDBP 1 2 0
chr12:32607957|32611283 TAF15 0 1 0
chr12:32607957|32611283 IGF2BP3 0 0 3
chr12:32607957|32611283 IGF2BP2 1 0 1
chr12:32607957|32611283 PTBP1 1 0 0
chr12:32607957|32611283 EIF4A3 0 0 5
chr12:32607957|32611283 AGO2 0 0 1
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab