CircRNA Information

General Information
circRNA Basic Information
CircID chr12:3286166|3286420
Strand +
CircType exon
Host Gene ENSG00000011105.10;
Algorism CIRI2;
Sequence CCTGCTCTCCCTCCCGTGCTGCCCGGGGGCAGGCAGGTGGGCAAGGAGGGGGCAGGAAGCCCCCCAGGCCTCACCTCCTGAGTCCCCAATCAGGGCAGGGAGGCCAGGCCCCACCCTGGACTATTGACTCACTGCAGTGGGGAGGAGGAAAGTGTGGGGCACGGGAACACAAGGGCTGGCCGGACTCTGAGAAGCTGAGGGACAAAGAATGGACCCCAAGCACCTCACGCCCAGCTCCCATCCTATGCCACGTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:3286166|3286420 hsa-miR-510-5p 0 0 1
chr12:3286166|3286420 hsa-miR-510-3p 0 0 1
chr12:3286166|3286420 hsa-miR-581 0 1 1
chr12:3286166|3286420 hsa-miR-585-5p 0 0 1
chr12:3286166|3286420 hsa-miR-585-3p 0 0 1
chr12:3286166|3286420 hsa-miR-636 0 0 1
chr12:3286166|3286420 hsa-miR-637 0 1 1
chr12:3286166|3286420 hsa-miR-661 0 1 1
chr12:3286166|3286420 hsa-miR-874-5p 0 0 1
chr12:3286166|3286420 hsa-miR-874-3p 0 0 1
chr12:3286166|3286420 hsa-miR-920 0 0 1
chr12:3286166|3286420 hsa-miR-1238-5p 0 0 1
chr12:3286166|3286420 hsa-miR-1238-3p 0 0 1
chr12:3286166|3286420 hsa-miR-1294 0 0 1
chr12:3286166|3286420 hsa-miR-1265 0 0 1
chr12:3286166|3286420 hsa-miR-615-5p 0 0 1
chr12:3286166|3286420 hsa-miR-146b-3p 0 0 1
chr12:3286166|3286420 hsa-miR-1224-3p 0 1 1
chr12:3286166|3286420 hsa-miR-509-3p 0 0 1
chr12:3286166|3286420 hsa-miR-502-5p 0 1 1
chr12:3286166|3286420 hsa-miR-324-3p 0 0 1
chr12:3286166|3286420 hsa-miR-509-3-5p 0 1 1
chr12:3286166|3286420 hsa-miR-509-5p 0 0 1
chr12:3286166|3286420 hsa-miR-516a-3p 0 0 1
chr12:3286166|3286420 hsa-miR-1268 0 0 1
chr12:3286166|3286420 hsa-miR-129-3p 0 0 1
chr12:3286166|3286420 hsa-miR-665 0 1 0
chr12:3286166|3286420 hsa-miR-1183 0 1 0
chr12:3286166|3286420 hsa-miR-1268a 1 1 0
chr12:3286166|3286420 hsa-miR-1913 0 1 0
chr12:3286166|3286420 hsa-miR-1976 0 1 0
chr12:3286166|3286420 hsa-miR-2861 0 1 0
chr12:3286166|3286420 hsa-miR-3147 0 1 0
chr12:3286166|3286420 hsa-miR-3174 0 1 0
chr12:3286166|3286420 hsa-miR-4300 0 1 0
chr12:3286166|3286420 hsa-miR-3945 0 1 0
chr12:3286166|3286420 hsa-miR-1268b 1 1 0
chr12:3286166|3286420 hsa-miR-4418 0 1 0
chr12:3286166|3286420 hsa-miR-4449 1 0 0
chr12:3286166|3286420 hsa-miR-4487 0 1 0
chr12:3286166|3286420 hsa-miR-2392 0 1 0
chr12:3286166|3286420 hsa-miR-4710 0 1 0
chr12:3286166|3286420 hsa-miR-5572 1 0 0
chr12:3286166|3286420 hsa-miR-6844 0 1 0
chr12:3286166|3286420 hsa-miR-6863 0 1 0
chr12:3286166|3286420 hsa-miR-12126 0 1 0
chr12:3286166|3286420 hsa-miR-17-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6749-3p 1 0 0
chr12:3286166|3286420 hsa-miR-92a-2-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6747-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6894-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6510-5p 0 1 0
chr12:3286166|3286420 hsa-miR-1227-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6840-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6727-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6721-5p 1 0 0
chr12:3286166|3286420 hsa-miR-1915-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6871-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6810-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6788-3p 1 0 0
chr12:3286166|3286420 hsa-miR-6894-3p 0 1 0
chr12:3286166|3286420 hsa-miR-5010-3p 0 1 0
chr12:3286166|3286420 hsa-miR-885-3p 1 0 0
chr12:3286166|3286420 hsa-miR-7113-3p 1 1 0
chr12:3286166|3286420 hsa-miR-3667-3p 1 0 0
chr12:3286166|3286420 hsa-miR-767-5p 1 0 0
chr12:3286166|3286420 hsa-miR-4667-3p 0 1 0
chr12:3286166|3286420 hsa-miR-149-3p 0 1 0
chr12:3286166|3286420 hsa-miR-3190-5p 1 0 0
chr12:3286166|3286420 hsa-miR-4646-3p 0 1 0
chr12:3286166|3286420 hsa-miR-4707-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6889-3p 0 1 0
chr12:3286166|3286420 hsa-miR-4758-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6887-3p 0 1 0
chr12:3286166|3286420 hsa-miR-2355-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6778-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6752-3p 0 1 0
chr12:3286166|3286420 hsa-miR-3124-3p 0 1 0
chr12:3286166|3286420 hsa-miR-7152-5p 0 1 0
chr12:3286166|3286420 hsa-miR-1229-3p 1 0 0
chr12:3286166|3286420 hsa-miR-5587-3p 1 1 0
chr12:3286166|3286420 hsa-miR-6780b-3p 0 1 0
chr12:3286166|3286420 hsa-miR-4763-3p 1 0 0
chr12:3286166|3286420 hsa-miR-6775-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6726-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6756-5p 1 1 0
chr12:3286166|3286420 hsa-miR-6851-5p 0 1 0
chr12:3286166|3286420 hsa-miR-1249-5p 0 1 0
chr12:3286166|3286420 hsa-miR-3127-3p 0 1 0
chr12:3286166|3286420 hsa-miR-4728-5p 0 1 0
chr12:3286166|3286420 hsa-miR-5189-5p 1 0 0
chr12:3286166|3286420 hsa-miR-328-5p 1 0 0
chr12:3286166|3286420 hsa-miR-4632-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6846-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6848-5p 0 1 0
chr12:3286166|3286420 hsa-miR-939-5p 1 0 0
chr12:3286166|3286420 hsa-miR-6731-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6791-3p 0 1 0
chr12:3286166|3286420 hsa-miR-6766-5p 0 1 0
chr12:3286166|3286420 hsa-miR-3689d 0 1 0
chr12:3286166|3286420 hsa-miR-5591-5p 0 1 0
chr12:3286166|3286420 hsa-miR-6829-3p 0 1 0
chr12:3286166|3286420 hsa-miR-3059-5p 1 0 0
chr12:3286166|3286420 hsa-miR-3922-3p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:3286166|3286420
ORF Type ORF1
Protein Length 41
Nucleotide Length 126
Protein Sequence LLSLPCCPGAGRWARRGQEAPQASPPESPIRAGRPGPTLDY
Nucleotide Sequence CTGCTCTCCCTCCCGTGCTGCCCGGGGGCAGGCAGGTGGGCAAGGAGGGGGCAGGAAGCCCCCCAGGCCTCACCTCCTGAGTCCCCAATCAGGGCAGGGAGGCCAGGCCCCACCCTGGACTATTGA
CircID chr12:3286166|3286420
ORF Type ORF2
Protein Length 59
Nucleotide Length 177
Protein Sequence MSPQSGQGGQAPPWTIDSLQWGGGKCGAREHKGWPDSEKLRDKEWTPSTSRPAPILCHV
Nucleotide Sequence CTGAGTCCCCAATCAGGGCAGGGAGGCCAGGCCCCACCCTGGACTATTGACTCACTGCAGTGGGGAGGAGGAAAGTGTGGGGCACGGGAACACAAGGGCTGGCCGGACTCTGAGAAGCTGAGGGACAAAGAATGGACCCCAAGCACCTCACGCCCAGCTCCCATCCTATGCCACGTC
CircID chr12:3286166|3286420
ORF Type ORF3
Protein Length 37
Nucleotide Length 114
Protein Sequence MGVRCLGSILCPSASQSPASPCVPVPHTFLLPTAVSQ
Nucleotide Sequence CTGGGCGTGAGGTGCTTGGGGTCCATTCTTTGTCCCTCAGCTTCTCAGAGTCCGGCCAGCCCTTGTGTTCCCGTGCCCCACACTTTCCTCCTCCCCACTGCAGTGAGTCAATAG
CircID chr12:3286166|3286420
ORF Type ORF4
Protein Length 31
Nucleotide Length 93
Protein Sequence MIGDSGGEAWGASCPLLAHLPAPGQHGRESR
Nucleotide Sequence CTGATTGGGGACTCAGGAGGTGAGGCCTGGGGGGCTTCCTGCCCCCTCCTTGCCCACCTGCCTGCCCCCGGGCAGCACGGGAGGGAGAGCAGG
CircID chr12:3286166|3286420
ORF Type ORF5
Protein Length 29
Nucleotide Length 87
Protein Sequence MGTQEVRPGGLPAPSLPTCLPPGSTGGRA
Nucleotide Sequence TTGGGGACTCAGGAGGTGAGGCCTGGGGGGCTTCCTGCCCCCTCCTTGCCCACCTGCCTGCCCCCGGGCAGCACGGGAGGGAGAGCA
CircID chr12:3286166|3286420
ORF Type ORF6
Protein Length 56
Nucleotide Length 171
Protein Sequence MGAGREVLGVHSLSLSFSESGQPLCSRAPHFPPPHCSESIVQGGAWPPCPDWGLRR
Nucleotide Sequence ATGGGAGCTGGGCGTGAGGTGCTTGGGGTCCATTCTTTGTCCCTCAGCTTCTCAGAGTCCGGCCAGCCCTTGTGTTCCCGTGCCCCACACTTTCCTCCTCCCCACTGCAGTGAGTCAATAGTCCAGGGTGGGGCCTGGCCTCCCTGCCCTGATTGGGGACTCAGGAGGTGA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab