CircRNA Information

General Information
circRNA Basic Information
CircID chr12:3607344|3607504
Strand +
CircType exon
Host Gene ENSG00000130038.8;
Algorism CIRI2;
Sequence AAAAGATGCTTCCCTGCCCTGTTCTCCTCCTTCCTGTTGTGAAAGCAGCCTCCCTTGCCCTTACCCAGCTGTGGCTCTCTCAGCGGCTTCCTCTAGCCCCAAAGGCCTGCTCAGAATAAGGACCTGCACACAAGTTGTGTGGCCCTGGGCAAAACCTGGAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:3607344|3607504 hsa-miR-555 0 0 1
chr12:3607344|3607504 hsa-miR-581 0 0 1
chr12:3607344|3607504 hsa-miR-657 0 0 1
chr12:3607344|3607504 hsa-miR-765 1 1 1
chr12:3607344|3607504 hsa-miR-877-5p 0 0 1
chr12:3607344|3607504 hsa-miR-877-3p 0 0 1
chr12:3607344|3607504 hsa-miR-513b-5p 0 0 1
chr12:3607344|3607504 hsa-miR-513b-3p 0 0 1
chr12:3607344|3607504 hsa-miR-1321 0 0 1
chr12:3607344|3607504 hsa-miR-671-5p 1 1 1
chr12:3607344|3607504 hsa-miR-485-5p 0 0 1
chr12:3607344|3607504 hsa-miR-1207-3p 0 0 1
chr12:3607344|3607504 hsa-miR-1207-5p 1 1 1
chr12:3607344|3607504 hsa-miR-147 0 0 1
chr12:3607344|3607504 hsa-miR-184 1 0 0
chr12:3607344|3607504 hsa-miR-612 1 1 0
chr12:3607344|3607504 hsa-miR-762 1 0 0
chr12:3607344|3607504 hsa-miR-1275 1 0 0
chr12:3607344|3607504 hsa-miR-3125 1 1 0
chr12:3607344|3607504 hsa-miR-3138 1 0 0
chr12:3607344|3607504 hsa-miR-3154 1 0 0
chr12:3607344|3607504 hsa-miR-3175 1 0 0
chr12:3607344|3607504 hsa-miR-4306 1 0 0
chr12:3607344|3607504 hsa-miR-4259 1 0 0
chr12:3607344|3607504 hsa-miR-4260 0 1 0
chr12:3607344|3607504 hsa-miR-4270 1 0 0
chr12:3607344|3607504 hsa-miR-4271 1 0 0
chr12:3607344|3607504 hsa-miR-3621 1 0 0
chr12:3607344|3607504 hsa-miR-3918 0 1 0
chr12:3607344|3607504 hsa-miR-4428 1 0 0
chr12:3607344|3607504 hsa-miR-4429 1 0 0
chr12:3607344|3607504 hsa-miR-4436a 1 0 0
chr12:3607344|3607504 hsa-miR-4441 1 0 0
chr12:3607344|3607504 hsa-miR-4476 1 1 0
chr12:3607344|3607504 hsa-miR-4487 1 0 0
chr12:3607344|3607504 hsa-miR-4489 0 1 0
chr12:3607344|3607504 hsa-miR-4498 1 0 0
chr12:3607344|3607504 hsa-miR-4516 1 0 0
chr12:3607344|3607504 hsa-miR-4530 1 0 0
chr12:3607344|3607504 hsa-miR-4533 1 1 0
chr12:3607344|3607504 hsa-miR-4534 1 0 0
chr12:3607344|3607504 hsa-miR-1587 1 0 0
chr12:3607344|3607504 hsa-miR-4672 1 0 0
chr12:3607344|3607504 hsa-miR-4681 1 0 0
chr12:3607344|3607504 hsa-miR-4689 1 1 0
chr12:3607344|3607504 hsa-miR-4710 1 0 0
chr12:3607344|3607504 hsa-miR-4739 1 1 0
chr12:3607344|3607504 hsa-miR-4779 1 0 0
chr12:3607344|3607504 hsa-miR-4784 1 0 0
chr12:3607344|3607504 hsa-miR-5572 1 0 0
chr12:3607344|3607504 hsa-miR-5698 1 0 0
chr12:3607344|3607504 hsa-miR-5703 1 0 0
chr12:3607344|3607504 hsa-miR-5787 1 0 0
chr12:3607344|3607504 hsa-miR-6124 1 0 0
chr12:3607344|3607504 hsa-miR-6127 1 0 0
chr12:3607344|3607504 hsa-miR-6132 1 0 0
chr12:3607344|3607504 hsa-miR-6133 1 0 0
chr12:3607344|3607504 hsa-miR-6165 1 0 0
chr12:3607344|3607504 hsa-miR-6860 1 1 0
chr12:3607344|3607504 hsa-miR-11399 1 0 0
chr12:3607344|3607504 hsa-miR-12118 1 1 0
chr12:3607344|3607504 hsa-miR-12119 1 0 0
chr12:3607344|3607504 hsa-miR-4433b-3p 1 0 0
chr12:3607344|3607504 hsa-miR-6734-5p 1 0 0
chr12:3607344|3607504 hsa-miR-504-3p 1 0 0
chr12:3607344|3607504 hsa-miR-4433a-3p 1 0 0
chr12:3607344|3607504 hsa-miR-6861-5p 0 1 0
chr12:3607344|3607504 hsa-miR-7106-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6894-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4687-3p 1 0 0
chr12:3607344|3607504 hsa-miR-25-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6799-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6510-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6089 1 0 0
chr12:3607344|3607504 hsa-miR-6880-5p 1 0 0
chr12:3607344|3607504 hsa-miR-7847-3p 1 0 0
chr12:3607344|3607504 hsa-miR-4695-5p 1 1 0
chr12:3607344|3607504 hsa-miR-7154-3p 1 0 0
chr12:3607344|3607504 hsa-miR-6727-5p 1 0 0
chr12:3607344|3607504 hsa-miR-3622b-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6806-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6721-5p 1 1 0
chr12:3607344|3607504 hsa-miR-197-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6829-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6732-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6827-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6798-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6760-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6888-5p 1 0 0
chr12:3607344|3607504 hsa-miR-3934-3p 0 1 0
chr12:3607344|3607504 hsa-miR-6835-5p 1 0 0
chr12:3607344|3607504 hsa-miR-1226-5p 1 0 0
chr12:3607344|3607504 hsa-miR-185-5p 1 0 0
chr12:3607344|3607504 hsa-miR-1229-5p 1 1 0
chr12:3607344|3607504 hsa-miR-4640-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6753-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4690-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4732-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6749-5p 1 1 0
chr12:3607344|3607504 hsa-miR-3202 1 0 0
chr12:3607344|3607504 hsa-miR-6824-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6789-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6886-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6781-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6878-5p 1 0 0
chr12:3607344|3607504 hsa-miR-664b-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6826-5p 1 1 0
chr12:3607344|3607504 hsa-miR-4773 1 1 0
chr12:3607344|3607504 hsa-miR-744-5p 1 0 0
chr12:3607344|3607504 hsa-miR-214-3p 1 0 0
chr12:3607344|3607504 hsa-miR-5004-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6761-5p 0 1 0
chr12:3607344|3607504 hsa-miR-520g-5p 0 1 0
chr12:3607344|3607504 hsa-miR-5003-5p 1 0 0
chr12:3607344|3607504 hsa-miR-1233-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4763-3p 1 1 0
chr12:3607344|3607504 hsa-miR-6778-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6812-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6870-5p 1 0 0
chr12:3607344|3607504 hsa-miR-5001-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6743-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6754-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6851-5p 1 0 0
chr12:3607344|3607504 hsa-miR-11181-3p 1 1 0
chr12:3607344|3607504 hsa-miR-1249-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6788-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6797-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6879-5p 1 1 0
chr12:3607344|3607504 hsa-miR-7111-5p 1 1 0
chr12:3607344|3607504 hsa-miR-1915-3p 1 1 0
chr12:3607344|3607504 hsa-miR-3620-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4728-5p 1 0 0
chr12:3607344|3607504 hsa-miR-5196-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6780b-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6836-5p 1 0 0
chr12:3607344|3607504 hsa-miR-328-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4649-5p 1 1 0
chr12:3607344|3607504 hsa-miR-4685-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4725-3p 1 0 0
chr12:3607344|3607504 hsa-miR-4726-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6729-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6738-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6794-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6846-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6858-5p 1 0 0
chr12:3607344|3607504 hsa-miR-3187-5p 1 0 0
chr12:3607344|3607504 hsa-miR-4436b-3p 0 1 0
chr12:3607344|3607504 hsa-miR-6845-5p 1 0 0
chr12:3607344|3607504 hsa-miR-7843-5p 0 1 0
chr12:3607344|3607504 hsa-miR-6736-5p 1 0 0
chr12:3607344|3607504 hsa-miR-3173-3p 1 1 0
chr12:3607344|3607504 hsa-miR-3679-5p 0 1 0
chr12:3607344|3607504 hsa-miR-4747-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6876-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6891-5p 1 1 0
chr12:3607344|3607504 hsa-miR-6750-5p 1 0 0
chr12:3607344|3607504 hsa-miR-320a-3p 1 0 0
chr12:3607344|3607504 hsa-miR-320b 1 0 0
chr12:3607344|3607504 hsa-miR-6837-5p 0 1 0
chr12:3607344|3607504 hsa-miR-4756-5p 0 1 0
chr12:3607344|3607504 hsa-miR-6859-5p 1 0 0
chr12:3607344|3607504 hsa-miR-3619-5p 1 0 0
chr12:3607344|3607504 hsa-miR-6811-5p 1 0 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:3607344|3607504
ORF Type ORF1
Protein Length 49
Nucleotide Length 147
Protein Sequence MPCSPPSCCESSLPCPYPAVALSAASSSPKGLLRIRTCTQVVWPWAKPG
Nucleotide Sequence CTGCCCTGTTCTCCTCCTTCCTGTTGTGAAAGCAGCCTCCCTTGCCCTTACCCAGCTGTGGCTCTCTCAGCGGCTTCCTCTAGCCCCAAAGGCCTGCTCAGAATAAGGACCTGCACACAAGTTGTGTGGCCCTGGGCAAAACCTGGA
CircID chr12:3607344|3607504
ORF Type ORF2
Protein Length 37
Nucleotide Length 114
Protein Sequence MLPCPVLLLPVVKAASLALTQLWLSQRLPLAPKACSE
Nucleotide Sequence ATGCTTCCCTGCCCTGTTCTCCTCCTTCCTGTTGTGAAAGCAGCCTCCCTTGCCCTTACCCAGCTGTGGCTCTCTCAGCGGCTTCCTCTAGCCCCAAAGGCCTGCTCAGAATAA
CircID chr12:3607344|3607504
ORF Type ORF3
Protein Length 27
Nucleotide Length 81
Protein Sequence MREPQLGKGKGGCFHNRKEENRAGKHL
Nucleotide Sequence CTGAGAGAGCCACAGCTGGGTAAGGGCAAGGGAGGCTGCTTTCACAACAGGAAGGAGGAGAACAGGGCAGGGAAGCATCTT
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab