CircRNA Information

General Information
circRNA Basic Information
CircID chr12:47973088|47973360
Strand +
CircType exon
Host Gene ENSG00000139219.16;
Algorism CIRI2;
Sequence CCAAGTACTTTCCAATCTCAGTCACTCTAGGACTCTGCACTGAATGGCTGACCTGACCTGATGTCCATTCATCCCACCCTCTCACAGTTCGGACTTTTCTCCCCTCTCTTTCTAAGAGACCTGAACTGGGCAGACTGCAAAATAAAATCTCGGTGTTCTATTTATTTATTGTCTTCCTGTAAGACCTTCGGGTCAAGGCAGAGGCAGGAAACTAACTGGTGTGAGTCAAATGCCCCCTGAGTGACTGCCCCCAGCCCAGGCCAGAAGACCTCC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:47973088|47973360 hsa-miR-148a-5p 0 0 1
chr12:47973088|47973360 hsa-miR-148a-3p 0 0 1
chr12:47973088|47973360 hsa-miR-152-5p 0 0 1
chr12:47973088|47973360 hsa-miR-152-3p 0 0 1
chr12:47973088|47973360 hsa-miR-134-5p 0 0 1
chr12:47973088|47973360 hsa-miR-134-3p 0 0 1
chr12:47973088|47973360 hsa-miR-148b-5p 0 0 1
chr12:47973088|47973360 hsa-miR-148b-3p 0 0 1
chr12:47973088|47973360 hsa-miR-346 0 0 1
chr12:47973088|47973360 hsa-miR-493-5p 0 0 1
chr12:47973088|47973360 hsa-miR-493-3p 0 0 1
chr12:47973088|47973360 hsa-miR-507 0 0 1
chr12:47973088|47973360 hsa-miR-510-5p 0 0 1
chr12:47973088|47973360 hsa-miR-510-3p 0 0 1
chr12:47973088|47973360 hsa-miR-557 0 0 1
chr12:47973088|47973360 hsa-miR-600 0 0 1
chr12:47973088|47973360 hsa-miR-622 0 1 1
chr12:47973088|47973360 hsa-miR-637 1 1 1
chr12:47973088|47973360 hsa-miR-661 0 1 1
chr12:47973088|47973360 hsa-miR-668-5p 0 0 1
chr12:47973088|47973360 hsa-miR-668-3p 0 0 1
chr12:47973088|47973360 hsa-miR-890 0 0 1
chr12:47973088|47973360 hsa-miR-1228-5p 0 0 1
chr12:47973088|47973360 hsa-miR-1228-3p 0 0 1
chr12:47973088|47973360 hsa-miR-548k 0 0 1
chr12:47973088|47973360 hsa-miR-1266-5p 0 0 1
chr12:47973088|47973360 hsa-miR-1266-3p 0 0 1
chr12:47973088|47973360 hsa-miR-486-3p 1 1 1
chr12:47973088|47973360 hsa-miR-324-3p 0 0 1
chr12:47973088|47973360 hsa-miR-342-3p 0 0 1
chr12:47973088|47973360 hsa-miR-450b-5p 0 0 1
chr12:47973088|47973360 hsa-miR-7 0 0 1
chr12:47973088|47973360 hsa-miR-220a 0 0 1
chr12:47973088|47973360 hsa-miR-608 1 0 0
chr12:47973088|47973360 hsa-miR-650 1 0 0
chr12:47973088|47973360 hsa-miR-762 1 1 0
chr12:47973088|47973360 hsa-miR-1538 1 0 0
chr12:47973088|47973360 hsa-miR-2861 1 0 0
chr12:47973088|47973360 hsa-miR-3141 1 0 0
chr12:47973088|47973360 hsa-miR-3175 0 1 0
chr12:47973088|47973360 hsa-miR-3176 0 1 0
chr12:47973088|47973360 hsa-miR-3196 1 0 0
chr12:47973088|47973360 hsa-miR-4311 0 1 0
chr12:47973088|47973360 hsa-miR-378g 0 1 0
chr12:47973088|47973360 hsa-miR-4439 0 1 0
chr12:47973088|47973360 hsa-miR-4488 1 0 0
chr12:47973088|47973360 hsa-miR-4492 0 1 0
chr12:47973088|47973360 hsa-miR-4498 1 1 0
chr12:47973088|47973360 hsa-miR-4499 1 0 0
chr12:47973088|47973360 hsa-miR-4505 1 0 0
chr12:47973088|47973360 hsa-miR-4507 1 0 0
chr12:47973088|47973360 hsa-miR-4510 1 0 0
chr12:47973088|47973360 hsa-miR-1587 1 1 0
chr12:47973088|47973360 hsa-miR-4651 1 0 0
chr12:47973088|47973360 hsa-miR-4654 1 1 0
chr12:47973088|47973360 hsa-miR-4656 1 0 0
chr12:47973088|47973360 hsa-miR-4734 1 0 0
chr12:47973088|47973360 hsa-miR-4741 1 0 0
chr12:47973088|47973360 hsa-miR-5090 1 0 0
chr12:47973088|47973360 hsa-miR-5190 1 0 0
chr12:47973088|47973360 hsa-miR-5572 1 0 0
chr12:47973088|47973360 hsa-miR-5787 1 1 0
chr12:47973088|47973360 hsa-miR-6086 1 0 0
chr12:47973088|47973360 hsa-miR-6127 1 0 0
chr12:47973088|47973360 hsa-miR-6133 1 0 0
chr12:47973088|47973360 hsa-miR-6745 1 0 0
chr12:47973088|47973360 hsa-miR-8085 1 1 0
chr12:47973088|47973360 hsa-miR-8089 1 0 0
chr12:47973088|47973360 hsa-miR-6734-5p 1 1 0
chr12:47973088|47973360 hsa-miR-4731-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6747-3p 0 1 0
chr12:47973088|47973360 hsa-miR-3157-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6861-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6894-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6728-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6804-5p 1 0 0
chr12:47973088|47973360 hsa-miR-1236-5p 0 1 0
chr12:47973088|47973360 hsa-miR-5187-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6515-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6727-5p 1 0 0
chr12:47973088|47973360 hsa-miR-8069 1 0 0
chr12:47973088|47973360 hsa-miR-6776-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6742-5p 1 0 0
chr12:47973088|47973360 hsa-miR-3180-3p 1 0 0
chr12:47973088|47973360 hsa-miR-6748-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6732-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6782-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6882-3p 0 1 0
chr12:47973088|47973360 hsa-miR-6853-5p 1 0 0
chr12:47973088|47973360 hsa-miR-1229-5p 1 0 0
chr12:47973088|47973360 hsa-miR-548au-3p 1 0 0
chr12:47973088|47973360 hsa-miR-5001-3p 0 1 0
chr12:47973088|47973360 hsa-miR-296-3p 1 0 0
chr12:47973088|47973360 hsa-miR-6749-5p 1 0 0
chr12:47973088|47973360 hsa-miR-4787-5p 1 0 0
chr12:47973088|47973360 hsa-miR-4446-3p 1 0 0
chr12:47973088|47973360 hsa-miR-149-3p 1 0 0
chr12:47973088|47973360 hsa-miR-6878-5p 0 1 0
chr12:47973088|47973360 hsa-miR-3678-3p 0 1 0
chr12:47973088|47973360 hsa-miR-4671-3p 0 1 0
chr12:47973088|47973360 hsa-miR-7113-5p 1 0 0
chr12:47973088|47973360 hsa-miR-3913-3p 0 1 0
chr12:47973088|47973360 hsa-miR-10400-5p 1 0 0
chr12:47973088|47973360 hsa-miR-1233-5p 1 0 0
chr12:47973088|47973360 hsa-miR-4763-3p 1 0 0
chr12:47973088|47973360 hsa-miR-6769b-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6778-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6812-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6816-5p 1 0 0
chr12:47973088|47973360 hsa-miR-5001-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6737-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6743-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6752-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6756-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6769a-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6803-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6813-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6819-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6842-5p 1 0 0
chr12:47973088|47973360 hsa-miR-7107-5p 1 0 0
chr12:47973088|47973360 hsa-miR-10401-5p 1 0 0
chr12:47973088|47973360 hsa-miR-1249-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6751-5p 1 0 0
chr12:47973088|47973360 hsa-miR-7111-5p 1 0 0
chr12:47973088|47973360 hsa-miR-3620-5p 1 1 0
chr12:47973088|47973360 hsa-miR-4728-5p 1 0 0
chr12:47973088|47973360 hsa-miR-1237-5p 1 0 0
chr12:47973088|47973360 hsa-miR-328-5p 1 0 0
chr12:47973088|47973360 hsa-miR-4685-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6846-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6848-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6883-5p 1 1 0
chr12:47973088|47973360 hsa-miR-4697-5p 1 0 0
chr12:47973088|47973360 hsa-miR-939-5p 1 0 0
chr12:47973088|47973360 hsa-miR-4769-5p 1 1 0
chr12:47973088|47973360 hsa-miR-3940-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6758-5p 1 1 0
chr12:47973088|47973360 hsa-miR-6877-3p 0 1 0
chr12:47973088|47973360 hsa-miR-6750-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6766-5p 1 0 0
chr12:47973088|47973360 hsa-miR-6785-5p 1 1 0
chr12:47973088|47973360 hsa-miR-10397-5p 0 1 0
chr12:47973088|47973360 hsa-miR-3922-3p 0 1 0
chr12:47973088|47973360 hsa-miR-4712-5p 0 1 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:47973088|47973360
ORF Type ORF1
Protein Length 60
Nucleotide Length 183
Protein Sequence MMSIHPTLSQFGLFSPLFLRDLNWADCKIKSRCSIYLLSSCKTFGSRQRQETNWCESNAP
Nucleotide Sequence CTGATGTCCATTCATCCCACCCTCTCACAGTTCGGACTTTTCTCCCCTCTCTTTCTAAGAGACCTGAACTGGGCAGACTGCAAAATAAAATCTCGGTGTTCTATTTATTTATTGTCTTCCTGTAAGACCTTCGGGTCAAGGCAGAGGCAGGAAACTAACTGGTGTGAGTCAAATGCCCCCTGA
CircID chr12:47973088|47973360
ORF Type ORF2
Protein Length 30
Nucleotide Length 93
Protein Sequence MGAVTQGAFDSHQLVSCLCLDPKVLQEDNK
Nucleotide Sequence CTGGGGGCAGTCACTCAGGGGGCATTTGACTCACACCAGTTAGTTTCCTGCCTCTGCCTTGACCCGAAGGTCTTACAGGAAGACAATAAATAA
CircID chr12:47973088|47973360
ORF Type ORF3
Protein Length 44
Nucleotide Length 132
Protein Sequence MPSSGLLEREGRKVRTVRGWDEWTSGQVSHSVQSPRVTEIGKYL
Nucleotide Sequence CTGCCCAGTTCAGGTCTCTTAGAAAGAGAGGGGAGAAAAGTCCGAACTGTGAGAGGGTGGGATGAATGGACATCAGGTCAGGTCAGCCATTCAGTGCAGAGTCCTAGAGTGACTGAGATTGGAAAGTACTTG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab