CircNet

General Information

circRNA Basic Information

CircID	chr12:48830386\|48830569
Strand	-
CircType	exon
Host Gene	ENSG00000174243.8;
Algorism	CIRI2;
Sequence	CTGGAAAGAGGGATGTGAGGGTTCTGAAAAACAGGCATCAGGCAGCTTTGGAGATGCCCTCAGCCCACAGGAAGAGTGCTGTGTCAGGCAAAGATGGTCTCTTCCCGGCGCTTCTTGGTGAGGATGGTGCCTGGCTTATGCTGGGCATCTGGGTGGTTGGCTAGTTCGGGGGGACAGGAAGACA

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:48830386\|48830569	hsa-miR-22-5p	0	0	1
chr12:48830386\|48830569	hsa-miR-22-3p	0	0	1
chr12:48830386\|48830569	hsa-miR-320a-5p	0	0	1
chr12:48830386\|48830569	hsa-miR-320a-3p	0	0	1
chr12:48830386\|48830569	hsa-miR-1236-5p	0	0	1
chr12:48830386\|48830569	hsa-miR-1236-3p	0	0	1
chr12:48830386\|48830569	hsa-miR-767-5p	0	0	1
chr12:48830386\|48830569	hsa-miR-338-3p	0	0	1
chr12:48830386\|48830569	hsa-miR-320b	0	0	1
chr12:48830386\|48830569	hsa-miR-320c	0	0	1
chr12:48830386\|48830569	hsa-miR-320d	0	0	1
chr12:48830386\|48830569	hsa-miR-515-5p	0	0	1
chr12:48830386\|48830569	hsa-miR-642	0	0	1
chr12:48830386\|48830569	hsa-miR-1201	0	0	1
chr12:48830386\|48830569	hsa-miR-1913	1	0	0
chr12:48830386\|48830569	hsa-miR-4296	0	1	0
chr12:48830386\|48830569	hsa-miR-4322	0	1	0
chr12:48830386\|48830569	hsa-miR-4265	0	1	0
chr12:48830386\|48830569	hsa-miR-4656	1	1	0
chr12:48830386\|48830569	hsa-miR-4673	0	1	0
chr12:48830386\|48830569	hsa-miR-6749-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-6875-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-6840-5p	1	0	0
chr12:48830386\|48830569	hsa-miR-3194-5p	0	1	0
chr12:48830386\|48830569	hsa-miR-6716-3p	1	1	0
chr12:48830386\|48830569	hsa-miR-6740-3p	1	1	0
chr12:48830386\|48830569	hsa-miR-1226-5p	0	1	0
chr12:48830386\|48830569	hsa-miR-6894-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-3616-3p	1	1	0
chr12:48830386\|48830569	hsa-miR-339-5p	1	0	0
chr12:48830386\|48830569	hsa-miR-4646-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-6889-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-7106-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-6730-3p	0	1	0
chr12:48830386\|48830569	hsa-miR-3619-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-7848-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-5189-3p	1	1	0
chr12:48830386\|48830569	hsa-miR-6748-3p	0	1	0
chr12:48830386\|48830569	hsa-miR-7152-5p	1	1	0
chr12:48830386\|48830569	hsa-miR-6502-3p	0	1	0
chr12:48830386\|48830569	hsa-miR-5196-5p	1	0	0
chr12:48830386\|48830569	hsa-miR-1295b-5p	0	1	0
chr12:48830386\|48830569	hsa-miR-6876-3p	1	0	0
chr12:48830386\|48830569	hsa-miR-4662a-5p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:48830386\|48830569
ORF Type	ORF1
Protein Length	35
Nucleotide Length	105
Protein Sequence	MCQAKMVSSRRFLVRMVPGLCWASGWLASSGGQED
Nucleotide Sequence	CTGTGTCAGGCAAAGATGGTCTCTTCCCGGCGCTTCTTGGTGAGGATGGTGCCTGGCTTATGCTGGGCATCTGGGTGGTTGGCTAGTTCGGGGGGACAGGAAGAC

CircID	chr12:48830386\|48830569
ORF Type	ORF2
Protein Length	46
Nucleotide Length	141
Protein Sequence	MKNRHQAALEMPSAHRKSAVSGKDGLFPALLGEDGAWLMLGIWVVG
Nucleotide Sequence	CTGAAAAACAGGCATCAGGCAGCTTTGGAGATGCCCTCAGCCCACAGGAAGAGTGCTGTGTCAGGCAAAGATGGTCTCTTCCCGGCGCTTCTTGGTGAGGATGGTGCCTGGCTTATGCTGGGCATCTGGGTGGTTGGCTAG

CircID	chr12:48830386\|48830569
ORF Type	ORF3
Protein Length	36
Nucleotide Length	111
Protein Sequence	MPSISQAPSSPRSAGKRPSLPDTALFLWAEGISKAA
Nucleotide Sequence	ATGCCCAGCATAAGCCAGGCACCATCCTCACCAAGAAGCGCCGGGAAGAGACCATCTTTGCCTGACACAGCACTCTTCCTGTGGGCTGAGGGCATCTCCAAAGCTGCCTGA

CircID	chr12:48830386\|48830569
ORF Type	ORF4
Protein Length	29
Nucleotide Length	87
Protein Sequence	MTQHSSCGLRASPKLPDACFSEPSHPSFQ
Nucleotide Sequence	CTGACACAGCACTCTTCCTGTGGGCTGAGGGCATCTCCAAAGCTGCCTGATGCCTGTTTTTCAGAACCCTCACATCCCTCTTTCCAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information