CircNet

General Information

circRNA Basic Information

CircID	chr12:48936299\|48936427
Strand	-
CircType	exon
Host Gene	ENSG00000134287.8;
Algorism	CIRI2;
Sequence	ATATACAGTCTACATTCCAGAGGAGGAACTGCAGTTACCACTATAACACCACAGACAAACTTTGGGGTGGGGGGAGCGGGAGTCCTCAGGAAGCAGAAAGCTGGAATCAGGGAAAGCATAAAATTAAAC

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:48936299\|48936427	hsa-miR-206	0	1	1
chr12:48936299\|48936427	hsa-miR-561-5p	0	0	1
chr12:48936299\|48936427	hsa-miR-561-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-613	0	0	1
chr12:48936299\|48936427	hsa-miR-632	0	0	1
chr12:48936299\|48936427	hsa-miR-1231	0	0	1
chr12:48936299\|48936427	hsa-miR-1200	0	1	1
chr12:48936299\|48936427	hsa-miR-1299	0	1	1
chr12:48936299\|48936427	hsa-miR-140-5p	0	0	1
chr12:48936299\|48936427	hsa-miR-1224-5p	0	0	1
chr12:48936299\|48936427	hsa-miR-875-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-125a-5p	1	0	1
chr12:48936299\|48936427	hsa-miR-509-3-5p	0	0	1
chr12:48936299\|48936427	hsa-miR-509-5p	0	0	1
chr12:48936299\|48936427	hsa-miR-491-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-516a-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-590-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-1274a	0	0	1
chr12:48936299\|48936427	hsa-miR-125b	0	0	1
chr12:48936299\|48936427	hsa-miR-1	0	0	1
chr12:48936299\|48936427	hsa-miR-544	0	0	1
chr12:48936299\|48936427	hsa-miR-151-3p	0	0	1
chr12:48936299\|48936427	hsa-miR-636	1	0	0
chr12:48936299\|48936427	hsa-miR-4726-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-345-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-532-3p	0	1	0
chr12:48936299\|48936427	hsa-miR-1343-3p	1	1	0
chr12:48936299\|48936427	hsa-miR-4446-5p	1	1	0
chr12:48936299\|48936427	hsa-miR-378a-5p	1	0	0
chr12:48936299\|48936427	hsa-miR-4646-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-7106-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-4732-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-3180-5p	1	0	0
chr12:48936299\|48936427	hsa-miR-3160-5p	1	0	0
chr12:48936299\|48936427	hsa-miR-4649-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-518c-5p	0	1	0
chr12:48936299\|48936427	hsa-miR-3124-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-584-5p	1	0	0
chr12:48936299\|48936427	hsa-miR-6885-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-548av-3p	0	1	0
chr12:48936299\|48936427	hsa-miR-320a-5p	1	0	0
chr12:48936299\|48936427	hsa-miR-10398-5p	0	1	0
chr12:48936299\|48936427	hsa-miR-5006-3p	1	0	0
chr12:48936299\|48936427	hsa-miR-6506-5p	0	1	0
chr12:48936299\|48936427	hsa-miR-1-3p	0	1	0

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:48936299\|48936427
ORF Type	ORF1
Protein Length	28
Nucleotide Length	87
Protein Sequence	MLPEDSRSPHPKVCLWCYSGNCSSSSGM
Nucleotide Sequence	CTGCTTCCTGAGGACTCCCGCTCCCCCCACCCCAAAGTTTGTCTGTGGTGTTATAGTGGTAACTGCAGTTCCTCCTCTGGAATGTAG

CircID	chr12:48936299\|48936427
ORF Type	ORF2
Protein Length	39
Nucleotide Length	117
Protein Sequence	MLSLIPAFCFLRTPAPPTPKFVCGVIVVTAVPPLECRLY
Nucleotide Sequence	ATGCTTTCCCTGATTCCAGCTTTCTGCTTCCTGAGGACTCCCGCTCCCCCCACCCCAAAGTTTGTCTGTGGTGTTATAGTGGTAACTGCAGTTCCTCCTCTGGAATGTAGACTGTAT

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites

CircRNA Information