CircRNA Information

General Information
circRNA Basic Information
CircID chr12:49002941|49003191
Strand +
CircType exon
Host Gene ENSG00000181929.10;
Algorism CIRI2;
Sequence CTGCATGAGACTCTGGAGACCATCATCAACAGGCTAGTGGAAGCAGAGGTAGGGAGGCCAGCAACCCTAAAGGAGCTGAGGGGAGCAGCCTTGAGAGTGGGGTTTGGCAAGGAGAGTAGGGGCAGAGGGGCTTCCCCTGAGGCCAGCACTAAACATTCCCTTTCTCCCTTGTTGCTCTGTGCCAGGTTCACCGACTTGTAGTGGTGGATGAAAATGATGTGGTCAAGGGAATTGTATCACTGTCTGACATC
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:49002941|49003191 hsa-miR-204-5p 0 0 1
chr12:49002941|49003191 hsa-miR-204-3p 0 0 1
chr12:49002941|49003191 hsa-miR-211-5p 0 0 1
chr12:49002941|49003191 hsa-miR-211-3p 0 0 1
chr12:49002941|49003191 hsa-miR-206 0 0 1
chr12:49002941|49003191 hsa-miR-520f-5p 0 0 1
chr12:49002941|49003191 hsa-miR-520f-3p 0 0 1
chr12:49002941|49003191 hsa-miR-596 0 0 1
chr12:49002941|49003191 hsa-miR-613 0 0 1
chr12:49002941|49003191 hsa-miR-623 0 0 1
chr12:49002941|49003191 hsa-miR-766-5p 0 0 1
chr12:49002941|49003191 hsa-miR-766-3p 0 0 1
chr12:49002941|49003191 hsa-miR-1266-5p 0 0 1
chr12:49002941|49003191 hsa-miR-1266-3p 0 0 1
chr12:49002941|49003191 hsa-miR-1267 0 0 1
chr12:49002941|49003191 hsa-miR-513c-5p 0 0 1
chr12:49002941|49003191 hsa-miR-513c-3p 0 0 1
chr12:49002941|49003191 hsa-miR-1324 0 0 1
chr12:49002941|49003191 hsa-miR-671-5p 0 0 1
chr12:49002941|49003191 hsa-miR-512-3p 0 1 1
chr12:49002941|49003191 hsa-miR-296-3p 0 1 1
chr12:49002941|49003191 hsa-miR-490-3p 0 0 1
chr12:49002941|49003191 hsa-miR-525-5p 0 0 1
chr12:49002941|49003191 hsa-miR-502-5p 0 0 1
chr12:49002941|49003191 hsa-miR-324-3p 0 0 1
chr12:49002941|49003191 hsa-miR-520a-5p 0 0 1
chr12:49002941|49003191 hsa-miR-516a-3p 0 0 1
chr12:49002941|49003191 hsa-miR-1 0 0 1
chr12:49002941|49003191 hsa-miR-1293 1 0 0
chr12:49002941|49003191 hsa-miR-1260a 1 0 0
chr12:49002941|49003191 hsa-miR-1913 1 1 0
chr12:49002941|49003191 hsa-miR-3176 0 1 0
chr12:49002941|49003191 hsa-miR-3938 0 1 0
chr12:49002941|49003191 hsa-miR-4518 0 1 0
chr12:49002941|49003191 hsa-miR-4739 1 0 0
chr12:49002941|49003191 hsa-miR-6084 1 0 0
chr12:49002941|49003191 hsa-miR-8073 0 1 0
chr12:49002941|49003191 hsa-miR-103a-2-5p 0 1 0
chr12:49002941|49003191 hsa-miR-3194-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6836-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6741-5p 1 0 0
chr12:49002941|49003191 hsa-miR-6762-3p 1 1 0
chr12:49002941|49003191 hsa-miR-6845-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6783-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6760-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6728-3p 1 1 0
chr12:49002941|49003191 hsa-miR-6882-3p 1 0 0
chr12:49002941|49003191 hsa-miR-7109-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6894-3p 1 0 0
chr12:49002941|49003191 hsa-miR-7113-3p 1 0 0
chr12:49002941|49003191 hsa-miR-3667-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6878-3p 0 1 0
chr12:49002941|49003191 hsa-miR-7111-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6780a-3p 0 1 0
chr12:49002941|49003191 hsa-miR-4667-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6878-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6769a-3p 1 1 0
chr12:49002941|49003191 hsa-miR-2115-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6889-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6778-3p 1 1 0
chr12:49002941|49003191 hsa-miR-2276-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6782-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6882-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6826-3p 0 1 0
chr12:49002941|49003191 hsa-miR-4749-3p 0 1 0
chr12:49002941|49003191 hsa-miR-328-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6795-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6501-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6777-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6883-3p 1 0 0
chr12:49002941|49003191 hsa-miR-4639-3p 0 1 0
chr12:49002941|49003191 hsa-miR-3162-3p 1 1 0
chr12:49002941|49003191 hsa-miR-4685-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6791-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6877-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6801-3p 1 0 0
chr12:49002941|49003191 hsa-miR-6810-3p 1 1 0
chr12:49002941|49003191 hsa-miR-4723-3p 0 1 0
chr12:49002941|49003191 hsa-miR-6744-3p 1 0 0
chr12:49002941|49003191 hsa-miR-103a-1-5p 0 1 0
chr12:49002941|49003191 hsa-miR-6843-3p 1 1 0
chr12:49002941|49003191 hsa-miR-3922-3p 0 1 0
chr12:49002941|49003191 hsa-miR-3121-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

    by mir_boxplot.py

circRNA Open Reading Frame (ORF)
CircID chr12:49002941|49003191
ORF Type ORF1
Protein Length 66
Nucleotide Length 201
Protein Sequence LHETLETIINRLVEAEVGRPATLKELRGAALRVGFGKESRGRGASPEASTKHSLSPLLLCARFTDL
Nucleotide Sequence CTGCATGAGACTCTGGAGACCATCATCAACAGGCTAGTGGAAGCAGAGGTAGGGAGGCCAGCAACCCTAAAGGAGCTGAGGGGAGCAGCCTTGAGAGTGGGGTTTGGCAAGGAGAGTAGGGGCAGAGGGGCTTCCCCTGAGGCCAGCACTAAACATTCCCTTTCTCCCTTGTTGCTCTGTGCCAGGTTCACCGACTTGTAG
CircID chr12:49002941|49003191
ORF Type ORF2
Protein Length 35
Nucleotide Length 108
Protein Sequence MARRVGAEGLPLRPALNIPFLPCCSVPGSPTCSGG
Nucleotide Sequence TTGGCAAGGAGAGTAGGGGCAGAGGGGCTTCCCCTGAGGCCAGCACTAAACATTCCCTTTCTCCCTTGTTGCTCTGTGCCAGGTTCACCGACTTGTAGTGGTGGATGA
CircID chr12:49002941|49003191
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MCQVHRLVVVDENDVVKGIVSLSDI
Nucleotide Sequence CTGTGCCAGGTTCACCGACTTGTAGTGGTGGATGAAAATGATGTGGTCAAGGGAATTGTATCACTGTCTGACATC
CircID chr12:49002941|49003191
ORF Type ORF4
Protein Length 61
Nucleotide Length 183
Protein Sequence MAQSNKGERECLVLASGEAPLPLLSLPNPTLKAAPLSSFRVAGLPTSASTSLLMMVSRVSC
Nucleotide Sequence CTGGCACAGAGCAACAAGGGAGAAAGGGAATGTTTAGTGCTGGCCTCAGGGGAAGCCCCTCTGCCCCTACTCTCCTTGCCAAACCCCACTCTCAAGGCTGCTCCCCTCAGCTCCTTTAGGGTTGCTGGCCTCCCTACCTCTGCTTCCACTAGCCTGTTGATGATGGTCTCCAGAGTCTCATGC
CircID chr12:49002941|49003191
ORF Type ORF5
Protein Length 29
Nucleotide Length 90
Protein Sequence MFSAGLRGSPSAPTLLAKPHSQGCSPQLL
Nucleotide Sequence ATGTTTAGTGCTGGCCTCAGGGGAAGCCCCTCTGCCCCTACTCTCCTTGCCAAACCCCACTCTCAAGGCTGCTCCCCTCAGCTCCTTTAG
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab