CircNet

General Information

circRNA Basic Information

CircID	chr12:50181904\|50192561
Strand	-
CircType	exon
Host Gene	ENSG00000050405.13;
Algorism	find_circ;CIRI2;CIRC
Sequence	GTGACTCCCAGGTTAAGAGTGAGGTTCAACAGCCTGTCCATCCCAAGCCACTAAGTCCAGATTCCAGAGCCTCCAGTCTTTCTGAAAGTTCTCCTCCCAAAGCAATGAAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGGAATGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCTCCTATTGCAACAACAAACTCAG

circRNA Expression in different cancers

circRNA-miRNA-gene regulatory network

Target miRNAs

CircID	miRNA	PITA	miRanda	targetScan
chr12:50181904\|50192561	hsa-miR-214-5p	0	1	1

Target Genes

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Target miRNA Expression in different cancers

circRNA Open Reading Frame (ORF)

CircID	chr12:50181904\|50192561
ORF Type	ORF1
Protein Length	46
Nucleotide Length	138
Protein Sequence	MKKFQAPARETCVECQKTVYPMERLLANQQVFHISCFRCSYCNNKL
Nucleotide Sequence	ATGAAGAAGTTTCAGGCACCTGCAAGAGAGACCTGCGTGGAATGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCTCCTATTGCAACAACAAACTC

CircID	chr12:50181904\|50192561
ORF Type	ORF2
Protein Length	33
Nucleotide Length	99
Protein Sequence	MSEDSLSNGASLGQPAGVSHQLLPLLLLQQQTQ
Nucleotide Sequence	ATGTCAGAAGACAGTCTATCCAATGGAGCGTCTCTTGGCCAACCAGCAGGTGTTTCACATCAGCTGCTTCCGTTGCTCCTATTGCAACAACAAACTCAG

CircID	chr12:50181904\|50192561
ORF Type	ORF3
Protein Length	52
Nucleotide Length	156
Protein Sequence	LDRLSSDIPRRSLLQVPETSSLLWEENFQKDWRLWNLDLVAWDGQAVEPHS*
Nucleotide Sequence	TTGGATAGACTGTCTTCTGACATTCCACGCAGGTCTCTCTTGCAGGTGCCTGAAACTTCTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTGGAATCTGGACTTAGTGGCTTGGGATGGACAGGCTGTTGAACCTCACTCTTAA

CircID	chr12:50181904\|50192561
ORF Type	ORF4
Protein Length	51
Nucleotide Length	153
Protein Sequence	VKHLLVGQETLHWIDCLLTFHAGLSCRCLKLLHCFGRRTFRKTGGSGIWT*
Nucleotide Sequence	GTGAAACACCTGCTGGTTGGCCAAGAGACGCTCCATTGGATAGACTGTCTTCTGACATTCCACGCAGGTCTCTCTTGCAGGTGCCTGAAACTTCTTCATTGCTTTGGGAGGAGAACTTTCAGAAAGACTGGAGGCTCTGGAATCTGGACTTAG

RNA Binding Protein (RBP) of circRNA

CircID	RBP	Number of Upstream Sites	Number of Downstream Sites	Number of Circ Exons Sites
chr12:50181904\|50192561	NOP56	0	1	0
chr12:50181904\|50192561	ELAVL1	1	4	2
chr12:50181904\|50192561	UPF1	0	0	1
chr12:50181904\|50192561	TAF15	1	1	0
chr12:50181904\|50192561	FMR1	0	0	2
chr12:50181904\|50192561	CPSF6	0	0	1
chr12:50181904\|50192561	CPSF1	0	0	1
chr12:50181904\|50192561	NOP58	0	1	1
chr12:50181904\|50192561	U2AF2	11	4	2
chr12:50181904\|50192561	DDX54	0	2	7
chr12:50181904\|50192561	PTBP1	3	13	0
chr12:50181904\|50192561	HNRNPC	13	9	1
chr12:50181904\|50192561	DHX9	0	1	1
chr12:50181904\|50192561	SMNDC1	0	0	1
chr12:50181904\|50192561	ACIN1	0	0	2
chr12:50181904\|50192561	FXR1	0	0	1
chr12:50181904\|50192561	SND1	0	1	0
chr12:50181904\|50192561	IGF2BP1	0	0	1
chr12:50181904\|50192561	BUD13	1	0	0
chr12:50181904\|50192561	IGF2BP3	0	1	1
chr12:50181904\|50192561	IGF2BP2	0	1	4
chr12:50181904\|50192561	TARDBP	1	0	0
chr12:50181904\|50192561	DICER1	0	0	2
chr12:50181904\|50192561	RBM47	1	0	1
chr12:50181904\|50192561	EIF4G2	0	0	1
chr12:50181904\|50192561	CSTF2T	2	0	1
chr12:50181904\|50192561	CSTF2	2	0	0
chr12:50181904\|50192561	EIF4A3	4	0	3
chr12:50181904\|50192561	AGO2	0	0	1

CircRNA Information