CircRNA Information

General Information
circRNA Basic Information
CircID chr12:51073823|51074082
Strand -
CircType exon
Host Gene ENSG00000110925.6;
Algorism find_circ;CIRI2;DCC;
Sequence CCACATCCATCCTGAAGCGGCAGAAGCAGCTGCGGAGGAAGAATGTACGCTTTGACCAGGTGACTGTATACTACTTTGCCCGGCGCCAAGGTTTTACCAGTGTGCCCAGCCAGGGTGGTAGCTCTCTGGGCATGGCCCAGCGCCATAACTCTGTACGGAGCTATACACTCTGTGAGTTTGCCCAGGAACAGGAGGTGAACCATCGAGAGATTCTGCGTGAGCACCTGAAGGAAGAGAAACTCCATGCCAAGAAAATGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:51073823|51074082 hsa-miR-134-5p 0 0 1
chr12:51073823|51074082 hsa-miR-134-3p 0 0 1
chr12:51073823|51074082 hsa-miR-326 0 0 1
chr12:51073823|51074082 hsa-miR-612 0 1 1
chr12:51073823|51074082 hsa-miR-618 0 0 1
chr12:51073823|51074082 hsa-miR-646 0 1 1
chr12:51073823|51074082 hsa-miR-648 0 0 1
chr12:51073823|51074082 hsa-miR-658 1 1 1
chr12:51073823|51074082 hsa-miR-298 1 1 1
chr12:51073823|51074082 hsa-miR-873-5p 0 0 1
chr12:51073823|51074082 hsa-miR-873-3p 0 0 1
chr12:51073823|51074082 hsa-miR-943 0 0 1
chr12:51073823|51074082 hsa-miR-1293 0 0 1
chr12:51073823|51074082 hsa-miR-1284 0 0 1
chr12:51073823|51074082 hsa-miR-1252-5p 0 0 1
chr12:51073823|51074082 hsa-miR-1252-3p 0 0 1
chr12:51073823|51074082 hsa-miR-125a-3p 0 0 1
chr12:51073823|51074082 hsa-miR-181c-3p 0 1 1
chr12:51073823|51074082 hsa-miR-199a-5p 0 0 1
chr12:51073823|51074082 hsa-miR-199b-5p 0 0 1
chr12:51073823|51074082 hsa-miR-330-5p 0 1 1
chr12:51073823|51074082 hsa-miR-1285 0 0 1
chr12:51073823|51074082 hsa-miR-661 1 0 0
chr12:51073823|51074082 hsa-miR-3125 1 0 0
chr12:51073823|51074082 hsa-miR-3193 0 1 0
chr12:51073823|51074082 hsa-miR-4298 1 0 0
chr12:51073823|51074082 hsa-miR-4302 0 1 0
chr12:51073823|51074082 hsa-miR-4253 0 1 0
chr12:51073823|51074082 hsa-miR-3937 1 0 0
chr12:51073823|51074082 hsa-miR-3960 1 0 0
chr12:51073823|51074082 hsa-miR-5047 1 0 0
chr12:51073823|51074082 hsa-miR-6077 0 1 0
chr12:51073823|51074082 hsa-miR-6165 1 1 0
chr12:51073823|51074082 hsa-miR-6860 0 1 0
chr12:51073823|51074082 hsa-miR-1247-3p 1 0 0
chr12:51073823|51074082 hsa-miR-6765-5p 1 0 0
chr12:51073823|51074082 hsa-miR-6894-5p 1 0 0
chr12:51073823|51074082 hsa-miR-3663-3p 0 1 0
chr12:51073823|51074082 hsa-miR-6880-5p 1 0 0
chr12:51073823|51074082 hsa-miR-4722-5p 1 0 0
chr12:51073823|51074082 hsa-miR-1301-3p 1 0 0
chr12:51073823|51074082 hsa-miR-6820-5p 0 1 0
chr12:51073823|51074082 hsa-miR-6827-5p 1 0 0
chr12:51073823|51074082 hsa-miR-5006-5p 1 0 0
chr12:51073823|51074082 hsa-miR-6850-5p 1 0 0
chr12:51073823|51074082 hsa-miR-4793-5p 0 1 0
chr12:51073823|51074082 hsa-miR-4783-3p 1 0 0
chr12:51073823|51074082 hsa-miR-4640-5p 1 0 0
chr12:51073823|51074082 hsa-miR-7854-3p 0 1 0
chr12:51073823|51074082 hsa-miR-149-3p 1 0 0
chr12:51073823|51074082 hsa-miR-4776-5p 1 0 0
chr12:51073823|51074082 hsa-miR-490-3p 1 0 0
chr12:51073823|51074082 hsa-miR-4707-5p 1 0 0
chr12:51073823|51074082 hsa-miR-4742-3p 0 1 0
chr12:51073823|51074082 hsa-miR-339-3p 0 1 0
chr12:51073823|51074082 hsa-miR-6812-5p 1 0 0
chr12:51073823|51074082 hsa-miR-11181-3p 1 0 0
chr12:51073823|51074082 hsa-miR-1249-5p 1 0 0
chr12:51073823|51074082 hsa-miR-10392-5p 1 0 0
chr12:51073823|51074082 hsa-miR-4685-5p 1 0 0
chr12:51073823|51074082 hsa-miR-939-5p 1 0 0
chr12:51073823|51074082 hsa-miR-6750-5p 1 0 0
chr12:51073823|51074082 hsa-miR-6500-5p 0 1 0
Target Genes
       

Note about Function Analysis:
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Target miRNA Expression in different cancers

    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


    by mir_boxplot.py


circRNA Open Reading Frame (ORF)
CircID chr12:51073823|51074082
ORF Type ORF1
Protein Length 81
Nucleotide Length 243
Protein Sequence MEFLFLQVLTQNLSMVHLLFLGKLTECIAPYRVMALGHAQRATTLAGHTGKTLAPGKVVYSHLVKAYILPPQLLLPLQDGC
Nucleotide Sequence ATGGAGTTTCTCTTCCTTCAGGTGCTCACGCAGAATCTCTCGATGGTTCACCTCCTGTTCCTGGGCAAACTCACAGAGTGTATAGCTCCGTACAGAGTTATGGCGCTGGGCCATGCCCAGAGAGCTACCACCCTGGCTGGGCACACTGGTAAAACCTTGGCGCCGGGCAAAGTAGTATACAGTCACCTGGTCAAAGCGTACATTCTTCCTCCGCAGCTGCTTCTGCCGCTTCAGGATGGATGT

CircID chr12:51073823|51074082
ORF Type ORF2
Protein Length 43
Nucleotide Length 129
Protein Sequence MAQRHNSVRSYTLCEFAQEQEVNHREILREHLKEEKLHAKKMK
Nucleotide Sequence ATGGCCCAGCGCCATAACTCTGTACGGAGCTATACACTCTGTGAGTTTGCCCAGGAACAGGAGGTGAACCATCGAGAGATTCTGCGTGAGCACCTGAAGGAAGAGAAACTCCATGCCAAGAAAATGAAG

CircID chr12:51073823|51074082
ORF Type ORF2
Protein Length 29
Nucleotide Length 90
Protein Sequence MAWSFSSFRCSRRISRWFTSCSWANSQSV
Nucleotide Sequence TTGGCATGGAGTTTCTCTTCCTTCAGGTGCTCACGCAGAATCTCTCGATGGTTCACCTCCTGTTCCTGGGCAAACTCACAGAGTGTATAG

CircID chr12:51073823|51074082
ORF Type ORF3
Protein Length 44
Nucleotide Length 135
Protein Sequence MYTTLPGAKVLPVCPARVVALWAWPSAITLYGAIHSVSLPRNRR
Nucleotide Sequence CTGTATACTACTTTGCCCGGCGCCAAGGTTTTACCAGTGTGCCCAGCCAGGGTGGTAGCTCTCTGGGCATGGCCCAGCGCCATAACTCTGTACGGAGCTATACACTCTGTGAGTTTGCCCAGGAACAGGAGGTGA

CircID chr12:51073823|51074082
ORF Type ORF4
Protein Length 83
Nucleotide Length 249
Protein Sequence MKRQKQLRRKNVRFDQVTVYYFARRQGFTSVPSQGGSSLGMAQRHNSVRSYTLCEFAQEQEVNHREILREHLKEEKLHAKKMK
Nucleotide Sequence CTGAAGCGGCAGAAGCAGCTGCGGAGGAAGAATGTACGCTTTGACCAGGTGACTGTATACTACTTTGCCCGGCGCCAAGGTTTTACCAGTGTGCCCAGCCAGGGTGGTAGCTCTCTGGGCATGGCCCAGCGCCATAACTCTGTACGGAGCTATACACTCTGTGAGTTTGCCCAGGAACAGGAGGTGAACCATCGAGAGATTCTGCGTGAGCACCTGAAGGAAGAGAAACTCCATGCCAAGAAAATGAAG

RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
chr12:51073823|51074082 NOP56 0 0 1
chr12:51073823|51074082 ELAVL1 1 0 1
chr12:51073823|51074082 PRPF8 1 5 1
chr12:51073823|51074082 UPF1 1 1 0
chr12:51073823|51074082 TAF15 0 1 0
chr12:51073823|51074082 FMR1 0 0 3
chr12:51073823|51074082 FUS 1 1 0
chr12:51073823|51074082 SRSF7 0 0 1
chr12:51073823|51074082 SRSF1 0 0 2
chr12:51073823|51074082 NOP58 1 0 2
chr12:51073823|51074082 U2AF1 1 0 2
chr12:51073823|51074082 ADAR 1 0 0
chr12:51073823|51074082 U2AF2 2 1 2
chr12:51073823|51074082 DDX54 0 0 3
chr12:51073823|51074082 HNRNPA2B1 1 0 0
chr12:51073823|51074082 HNRNPC 0 3 0
chr12:51073823|51074082 TRA2A 0 0 1
chr12:51073823|51074082 DHX9 2 0 1
chr12:51073823|51074082 HNRNPA1 1 0 0
chr12:51073823|51074082 RANGAP1 0 0 1
chr12:51073823|51074082 FXR1 0 0 1
chr12:51073823|51074082 FXR2 0 0 2
chr12:51073823|51074082 IGF2BP2 7 1 3
chr12:51073823|51074082 TARDBP 0 6 0
chr12:51073823|51074082 AIFM1 0 1 0
chr12:51073823|51074082 BUD13 0 1 0
chr12:51073823|51074082 DDX42 0 0 1
chr12:51073823|51074082 CSTF2T 0 0 1
chr12:51073823|51074082 TIA1 0 0 1
chr12:51073823|51074082 ILF3 0 1 0
chr12:51073823|51074082 AGO2 0 0 1
chr12:51073823|51074082 EIF4A3 3 3 4
chr12:51073823|51074082 FBL 1 0 3