CircRNA Information

General Information
circRNA Basic Information
CircID chr12:51996501|51996716
Strand -
CircType exon
Host Gene ENSG00000135503.11;
Algorism CIRI2;
Sequence CTCCCACCTATCCGCCCTGCAGCAGAACCTTGGCGGTTTATAGGTAATGATGGAACTTAGACTCCTCTTCCCAGAGTCACAAGTAGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAG
circRNA Expression in different cancers

by boxplot.py
circRNA-miRNA-gene regulatory network
Target miRNAs
CircID miRNA PITA miRanda targetScan
chr12:51996501|51996716 hsa-miR-134-5p 0 0 1
chr12:51996501|51996716 hsa-miR-134-3p 0 0 1
chr12:51996501|51996716 hsa-miR-326 0 0 1
chr12:51996501|51996716 hsa-miR-555 0 0 1
chr12:51996501|51996716 hsa-miR-571 0 1 1
chr12:51996501|51996716 hsa-miR-758-5p 0 0 1
chr12:51996501|51996716 hsa-miR-758-3p 0 0 1
chr12:51996501|51996716 hsa-miR-298 0 0 1
chr12:51996501|51996716 hsa-miR-892a 0 0 1
chr12:51996501|51996716 hsa-miR-939-5p 0 0 1
chr12:51996501|51996716 hsa-miR-939-3p 0 0 1
chr12:51996501|51996716 hsa-miR-1205 0 0 1
chr12:51996501|51996716 hsa-miR-1288-5p 0 0 1
chr12:51996501|51996716 hsa-miR-1288-3p 0 0 1
chr12:51996501|51996716 hsa-miR-491-5p 0 0 1
chr12:51996501|51996716 hsa-miR-330-5p 0 0 1
chr12:51996501|51996716 hsa-miR-7 0 0 1
chr12:51996501|51996716 hsa-miR-644 0 0 1
chr12:51996501|51996716 hsa-miR-1269 0 0 1
chr12:51996501|51996716 hsa-miR-147 0 0 1
chr12:51996501|51996716 hsa-miR-608 1 0 0
chr12:51996501|51996716 hsa-miR-612 1 0 0
chr12:51996501|51996716 hsa-miR-637 1 0 0
chr12:51996501|51996716 hsa-miR-762 1 0 0
chr12:51996501|51996716 hsa-miR-765 1 0 0
chr12:51996501|51996716 hsa-miR-760 1 0 0
chr12:51996501|51996716 hsa-miR-1202 1 0 0
chr12:51996501|51996716 hsa-miR-1268a 1 0 0
chr12:51996501|51996716 hsa-miR-2110 1 0 0
chr12:51996501|51996716 hsa-miR-3141 0 1 0
chr12:51996501|51996716 hsa-miR-3147 1 1 0
chr12:51996501|51996716 hsa-miR-3154 0 1 0
chr12:51996501|51996716 hsa-miR-3169 1 0 0
chr12:51996501|51996716 hsa-miR-3175 1 0 0
chr12:51996501|51996716 hsa-miR-4296 1 0 0
chr12:51996501|51996716 hsa-miR-4314 0 1 0
chr12:51996501|51996716 hsa-miR-4322 1 0 0
chr12:51996501|51996716 hsa-miR-4257 1 1 0
chr12:51996501|51996716 hsa-miR-4259 1 0 0
chr12:51996501|51996716 hsa-miR-4265 1 0 0
chr12:51996501|51996716 hsa-miR-3652 1 0 0
chr12:51996501|51996716 hsa-miR-3911 1 0 0
chr12:51996501|51996716 hsa-miR-1268b 1 0 0
chr12:51996501|51996716 hsa-miR-3689c 1 0 0
chr12:51996501|51996716 hsa-miR-4481 1 1 0
chr12:51996501|51996716 hsa-miR-4488 1 0 0
chr12:51996501|51996716 hsa-miR-4489 1 0 0
chr12:51996501|51996716 hsa-miR-4498 1 0 0
chr12:51996501|51996716 hsa-miR-4507 1 0 0
chr12:51996501|51996716 hsa-miR-1269b 1 0 0
chr12:51996501|51996716 hsa-miR-4522 1 0 0
chr12:51996501|51996716 hsa-miR-4525 1 0 0
chr12:51996501|51996716 hsa-miR-1587 1 0 0
chr12:51996501|51996716 hsa-miR-4651 1 1 0
chr12:51996501|51996716 hsa-miR-4656 1 0 0
chr12:51996501|51996716 hsa-miR-4657 1 0 0
chr12:51996501|51996716 hsa-miR-4674 1 0 0
chr12:51996501|51996716 hsa-miR-4675 1 0 0
chr12:51996501|51996716 hsa-miR-4688 1 0 0
chr12:51996501|51996716 hsa-miR-4710 1 1 0
chr12:51996501|51996716 hsa-miR-4739 1 0 0
chr12:51996501|51996716 hsa-miR-4741 1 0 0
chr12:51996501|51996716 hsa-miR-4748 1 0 0
chr12:51996501|51996716 hsa-miR-5090 1 0 0
chr12:51996501|51996716 hsa-miR-5192 1 0 0
chr12:51996501|51996716 hsa-miR-5100 0 1 0
chr12:51996501|51996716 hsa-miR-5572 1 0 0
chr12:51996501|51996716 hsa-miR-5698 1 0 0
chr12:51996501|51996716 hsa-miR-5787 1 0 0
chr12:51996501|51996716 hsa-miR-6071 0 1 0
chr12:51996501|51996716 hsa-miR-6077 1 0 0
chr12:51996501|51996716 hsa-miR-6134 0 1 0
chr12:51996501|51996716 hsa-miR-6745 1 0 0
chr12:51996501|51996716 hsa-miR-6860 1 0 0
chr12:51996501|51996716 hsa-miR-7704 1 0 0
chr12:51996501|51996716 hsa-miR-8052 1 0 0
chr12:51996501|51996716 hsa-miR-8075 1 0 0
chr12:51996501|51996716 hsa-miR-8085 1 1 0
chr12:51996501|51996716 hsa-miR-8089 1 1 0
chr12:51996501|51996716 hsa-miR-12114 1 1 0
chr12:51996501|51996716 hsa-miR-4433b-3p 1 0 0
chr12:51996501|51996716 hsa-miR-4731-5p 1 0 0
chr12:51996501|51996716 hsa-miR-504-3p 1 0 0
chr12:51996501|51996716 hsa-miR-7155-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6747-5p 1 0 0
chr12:51996501|51996716 hsa-miR-125b-1-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6861-5p 1 0 0
chr12:51996501|51996716 hsa-miR-7106-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6825-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6857-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4687-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6799-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6728-5p 1 0 0
chr12:51996501|51996716 hsa-miR-8071 1 0 0
chr12:51996501|51996716 hsa-miR-766-5p 1 0 0
chr12:51996501|51996716 hsa-miR-7114-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3192-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6880-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6867-5p 1 1 0
chr12:51996501|51996716 hsa-miR-4722-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3677-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6890-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6727-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3622b-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6759-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6721-5p 1 0 0
chr12:51996501|51996716 hsa-miR-197-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6742-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6716-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6871-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3151-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3180-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6748-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6793-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6796-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6829-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6732-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3190-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6881-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6782-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6810-5p 1 0 0
chr12:51996501|51996716 hsa-miR-30b-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6835-5p 1 0 0
chr12:51996501|51996716 hsa-miR-1226-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6740-5p 1 0 0
chr12:51996501|51996716 hsa-miR-1229-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4640-5p 1 0 0
chr12:51996501|51996716 hsa-miR-30c-2-3p 1 0 0
chr12:51996501|51996716 hsa-miR-885-3p 1 0 0
chr12:51996501|51996716 hsa-miR-1228-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6823-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4787-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4446-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6824-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6789-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3162-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6781-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6877-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4740-5p 1 0 0
chr12:51996501|51996716 hsa-miR-574-5p 1 0 0
chr12:51996501|51996716 hsa-miR-664b-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4727-3p 1 0 0
chr12:51996501|51996716 hsa-miR-1233-5p 1 0 0
chr12:51996501|51996716 hsa-miR-1273h-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3689b-3p 1 0 0
chr12:51996501|51996716 hsa-miR-4763-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6769b-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6778-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6812-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6816-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6865-5p 1 0 0
chr12:51996501|51996716 hsa-miR-1343-5p 1 0 0
chr12:51996501|51996716 hsa-miR-5001-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6737-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6743-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6752-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6756-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6803-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6815-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6819-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6842-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6851-5p 1 0 0
chr12:51996501|51996716 hsa-miR-7110-5p 1 0 0
chr12:51996501|51996716 hsa-miR-10401-5p 1 1 0
chr12:51996501|51996716 hsa-miR-1249-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6751-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6763-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6779-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6879-5p 1 1 0
chr12:51996501|51996716 hsa-miR-7111-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3620-5p 1 1 0
chr12:51996501|51996716 hsa-miR-4728-5p 1 0 0
chr12:51996501|51996716 hsa-miR-5196-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4632-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4685-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4726-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4745-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6729-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6735-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6738-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6777-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6846-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6848-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6858-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6889-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3187-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4436b-3p 0 1 0
chr12:51996501|51996716 hsa-miR-1238-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4758-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6511a-5p 1 0 0
chr12:51996501|51996716 hsa-miR-3940-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6731-5p 1 0 0
chr12:51996501|51996716 hsa-miR-7843-5p 1 1 0
chr12:51996501|51996716 hsa-miR-6736-5p 1 0 0
chr12:51996501|51996716 hsa-miR-4700-5p 1 1 0
chr12:51996501|51996716 hsa-miR-4646-5p 1 1 0
chr12:51996501|51996716 hsa-miR-541-3p 1 0 0
chr12:51996501|51996716 hsa-miR-6766-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6785-5p 1 0 0
chr12:51996501|51996716 hsa-miR-6790-5p 1 0 0
chr12:51996501|51996716 hsa-miR-5009-5p 1 0 0
chr12:51996501|51996716 hsa-miR-10400-3p 1 0 0
Target Genes
       

Note about Function Analysis:
We also provide this interface that can help researchers to perform GO, KEGG and disease enrichment analysis easily. This function will take around 30 seconds. After the analysis, this page will automatically jump to the result page.

Target miRNA Expression in different cancers

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circRNA Open Reading Frame (ORF)
CircID chr12:51996501|51996716
ORF Type ORF1
Protein Length 40
Nucleotide Length 120
Protein Sequence MPTHVHSQATSPLPSWPFCPYPTHSPTLPPLGKMEQVFGK
Nucleotide Sequence CTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAAG
CircID chr12:51996501|51996716
ORF Type ORF2
Protein Length 56
Nucleotide Length 168
Protein Sequence MMELRLLFPESQVASGICQHTSTPKPLAHSPVGPSALTPHTVQLFHLWGRWSRSLG
Nucleotide Sequence ATGATGGAACTTAGACTCCTCTTCCCAGAGTCACAAGTAGCCTCTGGGATCTGCCAACACACGTCCACTCCCAAGCCACTAGCCCACTCCCCAGTTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGA
CircID chr12:51996501|51996716
ORF Type ORF3
Protein Length 25
Nucleotide Length 75
Protein Sequence MALLPLPHTQSNSSTSGEDGAGLWE
Nucleotide Sequence TTGGCCCTTCTGCCCTTACCCCACACACAGTCCAACTCTTCCACCTCTGGGGAAGATGGAGCAGGTCTTTGGGAA
CircID chr12:51996501|51996716
ORF Type ORF4
Protein Length 68
Nucleotide Length 204
Protein Sequence MLHLPQRWKSWTVCGVRAEGPTGEWASGLGVDVCWQIPEATCDSGKRSLSSIITYKPPRFCCRADRWE
Nucleotide Sequence CTGCTCCATCTTCCCCAGAGGTGGAAGAGTTGGACTGTGTGTGGGGTAAGGGCAGAAGGGCCAACTGGGGAGTGGGCTAGTGGCTTGGGAGTGGACGTGTGTTGGCAGATCCCAGAGGCTACTTGTGACTCTGGGAAGAGGAGTCTAAGTTCCATCATTACCTATAAACCGCCAAGGTTCTGCTGCAGGGCGGATAGGTGGGAG
CircID chr12:51996501|51996716
ORF Type ORF5
Protein Length 27
Nucleotide Length 84
Protein Sequence MGSGLVAWEWTCVGRSQRLLVTLGRGV
Nucleotide Sequence CTGGGGAGTGGGCTAGTGGCTTGGGAGTGGACGTGTGTTGGCAGATCCCAGAGGCTACTTGTGACTCTGGGAAGAGGAGTCTAA
RNA Binding Protein (RBP) of circRNA
CircID RBP Number of Upstream Sites Number of Downstream Sites Number of Circ Exons Sites
© 2021 Arieh Warshel Institute of Computational Biology, CUHK(SZ) | Designed by : Biomics Lab